CK935676

Overview
NameCK935676
Unique NameCK935676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: DHSO_RHOSH (Sorbitol dehydrogenase OS=Rhodobacter sphaeroides GN=polS PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.367e-14
Identity = 57/184 (30.98%), Postives = 96/184 (52.17%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPI-KQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVIN 623
            +T LITG +RG+GRA A+   + G  V       +   +  +E+      + L  D+   +S++     ++++ G  DI+VNNA   +    I +++ E +D +   NV G   M++     MI   + G I+NM+S  GR G ALV  YCA+K AV  L++S     +  G+ + A+ PGV++
Sbjct:    6 KTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIAL--DVTDQASIDRCVAELLDRWGSIDILVNNAALFDLA-PIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVD 186          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YGCW_ECOLI (Uncharacterized oxidoreductase ygcW OS=Escherichia coli (strain K12) GN=ygcW PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.704e-14
Identity = 54/186 (29.03%), Postives = 91/186 (48.92%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            +T ++TG + GLG+A A  LAK G  +   S  +D   + +          F+ V I +  + +++     E+ G  DI+VNNAG I K NK+ D    ++D +ID N+     +      +MIP K G I+N+ S +   G      Y A+K A+ G +++   E+    + +  + PG   TD+
Sbjct:   19 KTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERFGTVDILVNNAG-ICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDI 203          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_MYCTU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium tuberculosis GN=fabG PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.704e-14
Identity = 61/201 (30.35%), Postives = 99/201 (49.25%), Query Frame = 3
Query:   33 MAATTPFNGIGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            M AT         VSR+VL+TG +RG+G A+AQ LA  GH V    R              P     +  D+  + +V+     V E +G  +++V+NAG ++ +  +  ++ E+F+ VI+ N+ G   + +     M   K G ++ + S  G  G    A Y ASK  V G++RS+A+E+    +    + PG I+TDM
Sbjct:    1 MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA----------PKGLFGVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG-LSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDM 190          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_MYCBO (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium bovis GN=fabG PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.704e-14
Identity = 61/201 (30.35%), Postives = 99/201 (49.25%), Query Frame = 3
Query:   33 MAATTPFNGIGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPD-GMAIVALNPGVINTDM 632
            M AT         VSR+VL+TG +RG+G A+AQ LA  GH V    R              P     +  D+  + +V+     V E +G  +++V+NAG ++ +  +  ++ E+F+ VI+ N+ G   + +     M   K G ++ + S  G  G    A Y ASK  V G++RS+A+E+    +    + PG I+TDM
Sbjct:    1 MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA----------PKGLFGVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG-LSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDM 190          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: FABG_ARATH (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g24360 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.704e-14
Identity = 57/204 (27.94%), Postives = 103/204 (50.49%), Query Frame = 3
Query:   30 TMAATTPFNGIGKSVSRTVLITGVSRGLGRALAQELAKRGHTV-IGCSRTQDKLTSLQSELPN-PDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKE-VPDGMAIVALNPGVINTDM 632
            T    +P   + K  S  V+ITG SRG+G+A+A  L K G  V +  +R+  +   +  ++       +    D+   + V+ + +  ++K G  D++VNNAG I ++  +  +   ++D VI  N+ G+    +  + +M+  K+G I+N+SS  G  G    A Y A+K  V   S++ A+E     + +  + PG I +DM
Sbjct:   61 TATEQSPGEVVQKVESPVVVITGASRGIGKAIALALGKAGCKVLVNYARSAKEAEEVAKQIEEYGGQAITFGGDVSKATDVDAMMKTALDKWGTIDVVVNNAG-ITRDTLLIRMKQSQWDEVIALNLTGVFLCTQAAVKIMMKKKRGRIINISSVVGLIGNIGQANYAAAKGGVISFSKTAAREGASRNINVNVVCPGFIASDM 263          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: YXNA_BACSU (Uncharacterized oxidoreductase yxnA OS=Bacillus subtilis GN=yxnA PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.449e-14
Identity = 52/195 (26.67%), Postives = 95/195 (48.72%), Query Frame = 3
Query:   66 KSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHH-LFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNKIWDVSPEEFDTVIDTN----VKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPDGMA---IVALNPGVINT 626
            K   + ++ITG S G+G   A+  A++G  V+  +R ++ L  L  EL    H  +++  D+     V  +A   +   G  D  VNNA  ++      DV+ E+   + DTN    V G    ++H+    +P   G ++N+ S +G  G  + + Y ++K+A+ G + S+  E+    A   +  ++PG I+T
Sbjct:   28 KLKDQVIVITGASSGIGLVTARMAAEKGAKVVAAARNEEALKELTDELKEKGHDAIWVKADVGKEEDVNRIAETAISTFGRFDTWVNNA-AVSTFGHAMDVTVEDMKRMFDTNFWGPVYGTRAAVKHYTGRGVP---GALINVGSLFGDRGTVIQSTYASAKFALHGWTESIRMELEKEQAPVSVTLIHPGRIDT 218          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: NOL_ORYSJ (Chlorophyll(ide) b reductase NOL, chloroplastic OS=Oryza sativa subsp. japonica GN=NOL PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.449e-14
Identity = 63/205 (30.73%), Postives = 104/205 (50.73%), Query Frame = 3
Query:   84 VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNP--DHHLF-LNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNK-IWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSG--AALVAPYCASKWAVEGLSRSVAKEVP----DGMAIVALNPGVINTDMLTSCFGTSAASY 668
            VLITG ++G+G ALA+E  K G  V+ CSR+ +++ S  ++L     + H++ +  D+R    V+ L     +K    DI +NNAG+   + K + + S E    VI TN  G+    R  I +M    +G  +    G G  G      A Y A+K +V  L++S+  E+     + + +  L+PG++ TD+L S   T  A +
Sbjct:   76 VLITGSTKGIGYALAKEFLKAGDNVVICSRSAERVESAVTDLKKEFGEQHVWGIVCDVREGKDVKALVDFARDKMKYIDIWINNAGSNAYSYKPLVETSDEALMEVITTNTLGLMICCREAINMMRNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMNEVNNVMVHNLSPGMVTTDLLMSGATTKQAKF 280          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y5909_MYXXD (Uncharacterized oxidoreductase MXAN_5909 OS=Myxococcus xanthus (strain DK 1622) GN=MXAN_5909 PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.729e-14
Identity = 61/190 (32.11%), Postives = 92/190 (48.42%), Query Frame = 3
Query:   78 RTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELPNPDHHLF-LNVDIRSNSSVEELARLVVEKKGVPDIIVNNA---GTINKNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEV-PDGMAIVALNPGVINTDM 632
            RT L+TG S GLGR LA  LA+RG  V    R   +L +L+ E       +  + +D+    +  E  R +  + G  D++V NA   GT N     W    E    +IDTNV G A  L   +P M+  K+G +V +SS  G  G A  A Y ASK  +     S+  ++   G+ +  + PG + +++
Sbjct:    7 RTALVTGASSGLGRGLALWLARRGVRVFAAGRRLPQLQALRDEAQAAGVTVEPVELDVTKADATLERIRALDAEAGGLDLVVANAGVGGTTNAKRLPW----ERVRGIIDTNVTGAAATLSAVLPQMVERKRGHLVGVSSLAGFRGLAGHAAYSASKAFLSTFMESLRVDLRGTGVRVTCIYPGFVKSEL 192          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: Y2146_BRAJA (Probable short-chain type dehydrogenase/reductase blr2146 OS=Bradyrhizobium japonicum GN=blr2146 PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.729e-14
Identity = 68/231 (29.44%), Postives = 105/231 (45.45%), Query Frame = 3
Query:   60 IGKSVSRTVLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKLTSLQSELP-NPDHHLFLNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTIN---KNNKIWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKEVPDGMAIVALN---PGVINTD----MLTSCFGTSAASYQ-------PPDAWALKA 698
            +G+   +  ++TG   G+G+A A  +A+ G  V+          +  +++     H L L +DI    +V  L        G  D++VNNA  ++   ++  I ++    +D  + TN++G     R  IP MI    G IVNMSS  G SG   +  Y ASK A+  LS S+A +   G A +  N   PG+I T+     L +C  T    +Q       P D  AL A
Sbjct:    1 MGRFEGKVAVVTGAGAGIGKACALAIAREGGRVVVADIDGSAAIACTAQIAAEAGHALALAIDIADAQAVAALFETAERHFGGVDLLVNNASAMHLTPRDRAILELELAVWDQTMATNLRGTLLCCRQAIPRMIARGGGAIVNMSSCQGLSGDTALTSYAASKAAMNMLSSSLATQY--GHAQIRCNAVAPGLIMTERLLAKLDACMQTHLRRHQLLPRVGRPEDVAALVA 229          
BLAST of CK935676 vs. ExPASy Swiss-Prot
Match: NOL_ARATH (Chlorophyll(ide) b reductase NOL, chloroplastic OS=Arabidopsis thaliana GN=NOL PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.729e-14
Identity = 66/232 (28.45%), Postives = 112/232 (48.28%), Query Frame = 3
Query:   12 REITITTMAATTPFNGIGKSVSRT----VLITGVSRGLGRALAQELAKRGHTVIGCSRTQDKL-TSLQSELPNPDHHLF-LNVDIRSNSSVEELARLVVEKKGVPDIIVNNAGTINKNNK-IWDVSPEEFDTVIDTNVKGIANMLRHFIPLMIPIKQGIIVNMSSGWGRSG--AALVAPYCASKWAVEGLSRSVAKEVP----DGMAIVALNPGVINTDMLTSCFGTSAASY 668
            + +T+T  +A       GK    T    +LITG ++G+G ALA+E  K G  V+ CSR+ +++ T++QS       H++    D+     V EL     +     DI +NNAG+   + K + + S E+   V+ TN  G+    R  + +M+   +G  +    G G  G      A Y A+K +V  L++S+  E+       + +  L+PG++ TD+L S   T  A +
Sbjct:   54 QNLTVTPSSAAVEARISGKREPMTPPYNILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGEHVWGTKCDVTEGKDVRELVAYSQKNLKYIDIWINNAGSNAYSFKPLAEASDEDLIEVVKTNTLGLMLCCREAMNMMLTQSRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVVVHNLSPGMVTTDLLMSGATTKQAKF 285          
The following BLAST results are available for this feature:
BLAST of CK935676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
DHSO_RHOSH4.367e-1430.98Sorbitol dehydrogenase OS=Rhodobacter sphaeroides ... [more]
YGCW_ECOLI5.704e-1429.03Uncharacterized oxidoreductase ygcW OS=Escherichia... [more]
FABG_MYCTU5.704e-1430.353-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
FABG_MYCBO5.704e-1430.353-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
FABG_ARATH5.704e-1427.943-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
YXNA_BACSU7.449e-1426.67Uncharacterized oxidoreductase yxnA OS=Bacillus su... [more]
NOL_ORYSJ7.449e-1430.73Chlorophyll(ide) b reductase NOL, chloroplastic OS... [more]
Y5909_MYXXD9.729e-1432.11Uncharacterized oxidoreductase MXAN_5909 OS=Myxoco... [more]
Y2146_BRAJA9.729e-1429.44Probable short-chain type dehydrogenase/reductase ... [more]
NOL_ARATH9.729e-1428.45Chlorophyll(ide) b reductase NOL, chloroplastic OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_G11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935676 ID=CK935676; Name=CK935676; organism=Citrus sinensis; type=EST; length=924bp
GGGGGAGAGGGAGGGAAATAACAATAACAACGATGGCAGCAACGACGCCG
TTTAACGGGATAGGGAAGAGCGTATCGCGAACAGTACTGATAACGGGAGT
GAGCAGAGGATTAGGGCGAGCCCTAGCTCAAGAGTTGGCCAAGCGCGGCC
ACACCGTGATCGGCTGCTCCCGCACTCAGGATAAGCTCACCTCCCTCCAA
TCAGAACTCCCTAATCCCGACCACCACCTCTTCCTCAATGTCGACATCAG
GTCAAATAGCAGTGTTGAAGAACTAGCACGTCTTGTCGTGGAGAAGAAAG
GCGTTCCTGATATTATAGTAAACAATGCAGGTACTATTAATAAAAATAAC
AAGATTTGGGATGTTTCGCCAGAAGAATTCGACACTGTTATTGATACTAA
TGTGAAAGGCATAGCAAATATGTTGCGTCACTTCATTCCTTTGATGATTC
CAATCAAGCAAGGGATTATCGTTAATATGTCTTCTGGTTGGGGAAGATCT
GGTGCTGCCCTGGTAGCACCTTATTGTGCTTCAAAATGGGCAGTTGAAGG
GTTGTCCAGATCAGTGGCAAAGGAGGTGCCTGATGGGATGGCAATTGTTG
CTTTAAATCCTGGTGTTATTAACACTGACATGCTTACGTCCTGCTTTGGC
ACTTCTGCTGCATCATACCAGCCACCTGATGCATGGGCTTTGAAGGCAGC
TACGACGATACTCAATCTTACAGGAGCAGACAATGGTGCATCTCTTACGG
TGTGACAGAAGCTTTTACATTCAAAATGCTGGGATCCAGCTAGGCGAGCG
TAACAGTTCACTGATAAAATCATATTCACTCTTCACTCATTGAATCAAAA
AGTAGAGCAGAGTGAACTNCATTCATCTTTTGTGACTTCTATGACACCTN
NNNNNCAGGAAAGCGGTTATTCTT
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