CK935691

Overview
NameCK935691
Unique NameCK935691
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935691 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.494e-25
Identity = 81/230 (35.22%), Postives = 121/230 (52.61%), Query Frame = 1
Query:  232 RAGIAEFMATFLFLYITVLTVMGVSK------SNTKCSTVG---IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVK---------GFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSA-TDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVG 864
            RA +AEF++TF+F++    +++ + K      ++   +T G   +  +A AF   +FA V     +SGGH+NPAVTFG L+  +++  RA++Y + Q LGA+    +++         GF       RL  G   V       +GL  EII TF LVY V+S   D KR +    + I+APL IG  V    L   P +G  +NPAR+ G A++      W DHWI+WVG
Sbjct:   24 RATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFA--LFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPVGF-------RLASGVGAV-------NGLVLEIILTFGLVYVVYSTLIDPKRGS----LGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALV---GWRWHDHWIYWVG 230          
BLAST of CK935691 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.258e-25
Identity = 79/227 (34.80%), Postives = 119/227 (52.42%), Query Frame = 1
Query:  205 GELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVG 864
            G+  S S  +A ++EF+AT LF++  V + +  +K  S+      G+  IA A    +F  V   A ISGGH+NPAVT GL +   ++L    FY + QCLG++    ++           +  G +V  HG + G    +G+  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A++          WI+WVG
Sbjct:   10 GDSFSVSSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVACLLL---------VFVTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---LSQIWIYWVG 220          
BLAST of CK935691 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.258e-25
Identity = 72/218 (33.03%), Postives = 119/218 (54.59%), Query Frame = 1
Query:  232 RAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLG----AEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVG 864
            +AG+AEF++TF+F++    + +  +K  ++   +  G+   + A    +F  V   A ISGGH+NPAVTFG  +   ++L R + Y++ Q LG++  + ++     S          +V A G ++G G+G     EI+ TF LVYTV+ +A D K+     ++ I+AP+ IGF V    L     TG  +NPA S G A++     +W +HW++W G
Sbjct:   21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTAS----------SVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAG 221          
BLAST of CK935691 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.258e-25
Identity = 67/184 (36.41%), Postives = 101/184 (54.89%), Query Frame = 1
Query:  331 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVV-------KGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWV 861
            +G+ G+A+AFG  +  + +    ISG H+NPAV+FGL++  +      + Y++ Q +GA+  AGV+        GFE S       G A+    GYT G G  +E++ T + +  +  ATDA+  A        AP+ IG A+ L+HL +IP+T T +NPARS G A +F    A    W+FWV
Sbjct:   35 IGVLGVAFAFGLTVLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLAS-NGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALQQLWLFWV 210          
BLAST of CK935691 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.255e-25
Identity = 77/219 (35.16%), Postives = 110/219 (50.23%), Query Frame = 1
Query:  208 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVG 864
            EL+S SF+RA  AEF AT  +++  +      S        + +  +A AFG  +  LV     ISG H+NPAVTF  L+  ++SL RA  YM  Q LGAV GA V+  +  +    R     N +    + G     EI  T   V  +F+  D +RN +   V     L +GF++ L HL  +  TG G+NPARS   AI+      + +HW++WVG
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFGL-----GSSLRWAPGPLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSV----ALAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGN---FTNHWVYWVG 207          
BLAST of CK935691 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.557e-25
Identity = 78/224 (34.82%), Postives = 115/224 (51.34%), Query Frame = 1
Query:  202 PGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVG 864
            PGEL      +A +AEF++  +F++    + M  SK      T   G+   + A    +F  V   A ISGGH+NPAVTFG  +   +SL +AV Y V Q LG+V    ++K   G         GA  ++ G    + +  EI+ TF LVYTV+ +A D K+      + ++AP+ IGF V    LA     G  +NPA S G A++      WD+HW++W+G
Sbjct:   11 PGELSHPDTAKAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIATGG-----AAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWDNHWVYWLG 222          
BLAST of CK935691 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.557e-25
Identity = 79/219 (36.07%), Postives = 111/219 (50.68%), Query Frame = 1
Query:  208 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVG 864
            EL+S SF+RA  AEF AT  +++      +G S        + +  +A AFG  +  LV     ISG H+NPAVTF  L+  ++SL RA  YM  Q LGAV GA V+  +  +    R     N +  G +       EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   AI+      + +HW++WVG
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-GPLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVG 207          
BLAST of CK935691 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.258e-25
Identity = 78/213 (36.62%), Postives = 111/213 (52.11%), Query Frame = 1
Query:  232 RAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSAT-DAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVG 864
            RA I+EF+AT +F++    +V+ + K     ST G +  +A A    +   V     ISGGH+NPAVTFG L+  ++SL RAV Y V Q LGAV    +++   G     R  G A  +A G      +  E + TF L+Y  ++   D KR     HV  +APL +GF +    LA  P  G G+NPAR  G A++      W  HW++W+G
Sbjct:   26 RAAISEFIATAIFVFAAEGSVLSLGKMYHDMSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGM---RPPGFA--LASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV---GWRWRHHWVYWLG 226          
BLAST of CK935691 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 7.258e-25
Identity = 76/227 (33.48%), Postives = 119/227 (52.42%), Query Frame = 1
Query:  205 GELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVG 864
            G+  S +  +A ++EF+AT LF++  V + +  +K  S+      G+  +A A    +F  V   A ISGGH+NPAVT GL +   +++    FY + QCLG++    ++           +  G +V  HG   G    +G+  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A++      +   WI+WVG
Sbjct:   10 GDSFSVASLKAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLL---------VFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---FSQIWIYWVG 220          
BLAST of CK935691 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.479e-25
Identity = 76/224 (33.93%), Postives = 116/224 (51.79%), Query Frame = 1
Query:  202 PGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVG 864
            PGEL      +A +AEF++T +F++    + M  SK       +  G+   + A    +F  V   A ISGGH+NPAVTFG  +   +SL +A+ Y V Q LG+V    ++K   G         GA  ++ G    + +  E++ TF LVYTV+ +A D K+      + ++AP+ IGF V    LA     G  +NPA S G A++      W++HW++WVG
Sbjct:   11 PGELSHPDTAKAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAAL-----GAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWENHWVYWVG 222          
The following BLAST results are available for this feature:
BLAST of CK935691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
TIP31_ARATH2.494e-2535.22Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
TIP23_ARATH3.258e-2534.80Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
TIP1_MEDTR3.258e-2533.03Probable aquaporin TIP-type OS=Medicago truncatula... [more]
AQPZ_PSEPK3.258e-2536.41Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
MIP_HUMAN4.255e-2535.16Lens fiber major intrinsic protein OS=Homo sapiens... [more]
TIP12_ORYSJ5.557e-2534.82Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
MIP_CAVPO5.557e-2536.07Lens fiber major intrinsic protein OS=Cavia porcel... [more]
TIP31_MAIZE7.258e-2536.62Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
TIP22_ARATH7.258e-2533.48Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
TIP12_MAIZE9.479e-2533.93Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_G08 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935691 ID=CK935691; Name=CK935691; organism=Citrus sinensis; type=EST; length=929bp
GGGACGCTACATACACAACACAAACACAGCATCTTCTTTGAGAGAATAAG
AGAGCGAGAGAGAGGTTCATCATCGTCAATGGAGGGCAAAGAAGAGGATG
TTAAGCTAGGAGCTAACAAGTTCTCAGAGAGGCAACCCATTGGGACATCA
GCTCAATCAGACAAAGACTACAAGGAGCCACCACCAGCACCTTTGTTTGA
GCCTGGTGAGCTCAAGTCATGGTCTTTTTACAGAGCTGGTATTGCAGAGT
TCATGGCTACCTTCTTGTTCCTCTACATCACTGTCTTGACTGTCATGGGT
GTCTCTAAGTCTAACACCAAGTGCTCCACTGTCGGTATCCAAGGAATTGC
TTGGGCCTTTGGTGGCATGATCTTTGCGCTTGTTTACTGCACTGCTGGTA
TCTCAGGAGGACACATCAACCCAGCAGTGACCTTCGGTCTGCTGCTAGCG
AGGAAGCTTTCCCTGACAAGGGCTGTCTTCTACATGGTCATGCAGTGCCT
TGGTGCTGTCTGTGGTGCTGGTGTTGTCAAGGGATTCGAAGGTTCAAAGA
ACTACGAGAGGTTGGGTGGTGGAGCCAATGTTGTTGCTCACGGCTACACC
AAGGGTGATGGTCTTGGTGCTGAGATTATTGGAACCTTTGTTCTTGTTTA
CACTGTCTTCTCTGCCACTGATGCGAAGAGAAACGCCAGAGACTCTCATG
TCCCTATTTTGGCCCCCCTCCCCATTGGATTTGCTGTTTTCTTGGTCCAC
CTGGCCACCATCCCCATCACAGGAACTGGCATCAACCCAGCTAGGAGTCT
TGGAGCTGCCATCATCTTCAACAAAGACCATGCCTGGGATGACCATTGGA
TCTTCTGGGTTGGACATTCATTGGAGCTGCACTGGCTGCTGTGTACCACA
GATAGTCATCAGGGCCATTCCCTTCAAGT
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