CK935696

Overview
NameCK935696
Unique NameCK935696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:90..1010. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935696 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 6.447e-34
Identity = 90/235 (38.30%), Postives = 132/235 (56.17%), Query Frame = 2
Query:  248 FARFARRYGKIYES----VEEMKLRFATFSKNLDLI--RSTNCKGLSYRLGLNKFADWSWEEFQRHRLGA----AQNCSATTKGNHKLTA----DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVXVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFE 907
            + R++  +GK   +    + +   RF  F  NL  I   + N K  +Y+LGL  FA+ + +E++   LGA     +  +     N K +A    D +P T DWR+ G V+ +KDQG CGSCW FST  ++E       G+ +SLSEQ+LVDC +++ NQGCNGGL   AF++I  NGGL+TE+ YPY G +G C    +N  V  +D   ++    E  L+ AV   +PVSVA +
Sbjct:    4 YLRWSLEHGKSNSNSNGIINQQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAKNVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDKSY-NQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAVS-YQPVSVAID 236          
BLAST of CK935696 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.420e-34
Identity = 87/219 (39.73%), Postives = 125/219 (57.08%), Query Frame = 2
Query:  275 KIYESVEEMKLRFATFSKNLDLIRSTNC-KGLSYRLGLNKFADWSWEEFQ----RHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKF-SSENVXVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFE 907
            K Y  + E + RF  F  NL  +   N     ++ +GL +FAD + EEF+    R ++   ++   T +  +K   DVLP+  DWR +G V  VKDQG+CGSCW FS  G++E       G+ ISLSEQ+LVDC + F N GC+GG+ + AFE+I  NGG++T++ YPY   D G+C    + N  V  +D   ++    E  L+ AV   +PVSVA E
Sbjct:   53 KNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKMERTKDSVKTERYLYK-EGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVA-HQPVSVAIE 269          
BLAST of CK935696 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.876e-33
Identity = 84/223 (37.67%), Postives = 118/223 (52.91%), Query Frame = 2
Query:  263 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLNKFADWSWEE----FQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVXVQVLDSVNITLGAEDELQHAVGLVRPVSVAFE 907
            + YGK Y+   E  +R   + KNL  +   N +   G+ SY LG+N   D + EE        R+      + T K N      +LP++ DWRE G V+ VK QG CG+CW FS  G+LEA      GK +SLS Q LVDC++ + N+GCNGG  ++AF+YI  N G+D+E +YPY   D  C++ S+           +  G ED L+ AV    PV V  +
Sbjct:   33 KTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPNQWQRNITYKSNPN---QMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVD 252          
BLAST of CK935696 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.179e-33
Identity = 89/231 (38.53%), Postives = 118/231 (51.08%), Query Frame = 2
Query:  248 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL--------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVXVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD 916
            F  F  +Y K+Y+  +E + RF  F +NL  I + N    S    +N  AD S  E  +   G   +     K N   T  V+        P++ DWR+   V+ VK Q  CGSCW FS   ++E+ YH      + LSEQQLVDC +   N GCNGGL S AFE I   GG+  E  YPYTG DGVCK ++    VQ+       L +E +L+  +    PVSVA +VVD
Sbjct:   43 FNEFVVKYNKVYKDDQEKEARFEIFKQNLADINARNALEDSAMFEINSRADISSNELLQKLTGLKLSLMRGEKKNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCDKV--NNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDGVCKNTTR--YVQLSGCYAYDLRSEKKLRQVLHEKGPVSVAIDVVD 269          
BLAST of CK935696 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.457e-33
Identity = 89/215 (41.40%), Postives = 114/215 (53.02%), Query Frame = 2
Query:  296 EMKLRFATFSKNLDLIRSTNCKG-LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN------HKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS----SENVXVQVLDSVNITLGAEDELQHAVGLVRPVSVAFE 907
            E   RF TF  N   I S N +G   YRL LN+F D    EF+   +G  +  + +   +        L    LP + DWR+ G V+ VKDQG CGSCW FST  S+E       G  +SLSEQ+L+DC  A +N GC GGL   AFEYIK NGGL TE AYPY    G C  +    +  V V +    ++   +E++L  AV   +PVSVA E
Sbjct:   61 EKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPSKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA-DNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVA-NQPVSVAVE 273          
BLAST of CK935696 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.457e-33
Identity = 84/224 (37.50%), Postives = 119/224 (53.12%), Query Frame = 2
Query:  263 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLNKFADWSWEE----FQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA-QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVXVQVLDSVNITLGAEDELQHAVGLVRPVSVAFE 907
            + Y K Y+   E   R   + KNL  +   N +   G+ SY LG+N   D + EE        R+ +    + T + N       LP++ DWRE G V+ VK QG CG+CW FS  G+LEA      GK +SLS Q LVDC+ + + N+GCNGG  + AF+YI  N G+D+E +YPY   +G C++ S+           +  G+ED L+ AV    PVSVA +
Sbjct:   33 KTYSKQYKEENEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTGEEVISLMGSLRVPSQWQRNVTYRSNSN---QKLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNGKCRYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAID 253          
BLAST of CK935696 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 141.739 bits (356), Expect = 5.457e-33
Identity = 74/178 (41.57%), Postives = 100/178 (56.18%), Query Frame = 2
Query:  368 SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVXVQVLDSVNITLGAEDELQHAVGLVRPVSVA 901
            S+ + +N F D + EEF++   G         K   +     +P + DWRE G ++PVKDQG CGSCW FS TG+LE       GK ISL+EQ LVDC+    N+GCNGG     F Y++ NGGLD+E +YPY GK   C+++ +         V+I    E +L  AV  V P+SVA
Sbjct:   15 SFTMAMNAFGDMTNEEFRQVMNGFQYQKHRKGKQFQERLLPEIPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCSGPQGNEGCNGGFMDNPFRYVQENGGLDSEASYPYEGKVKTCRYNPKYSAANDTGFVDIP-SQEKDLAKAVATVGPISVA 191          
BLAST of CK935696 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.128e-33
Identity = 89/215 (41.40%), Postives = 113/215 (52.56%), Query Frame = 2
Query:  296 EMKLRFATFSKNLDLIRSTNCKG-LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN------HKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS----SENVXVQVLDSVNITLGAEDELQHAVGLVRPVSVAFE 907
            E   RF TF  N   I S N +G   YRL LN+F D    EF+   +G  +  +     +        L    LP + DWR+ G V+ VKDQG CGSCW FST  S+E       G  +SLSEQ+L+DC  A +N GC GGL   AFEYIK NGGL TE AYPY    G C  +    +  V V +    ++   +E++L  AV   +PVSVA E
Sbjct:   61 EKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPAKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA-DNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVA-NQPVSVAVE 273          
BLAST of CK935696 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.074e-32
Identity = 83/223 (37.22%), Postives = 121/223 (54.26%), Query Frame = 2
Query:  263 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLNKFADWSWEEFQRHRLGAAQ--NCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCA--QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVXVQVLDSVNITLGAEDELQHAVGLVRPVSVAFE 907
            + + K Y+   E ++R   + KNL  I   N +   G+ +Y++G+N   D + EE    R+GA +    S  T      +   LP+T DWRE G V+ VK QG CG+CW FS  G+LE       GK ISLS Q LVDC+  + + N+GC GG  ++AF+YI  NGG++ + +YPY   D  C ++S+N        + +  G ED L+ AV    PVSV  +
Sbjct:   41 KTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEEISC-RMGALRISRQSPKTVTFRSYSNRTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKCHYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGID 262          
BLAST of CK935696 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.709e-32
Identity = 83/218 (38.07%), Postives = 116/218 (53.21%), Query Frame = 2
Query:  266 RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLS----YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVXVQVLDSVNITLGAEDELQHAVGLVRPVSVAFE 907
            ++GK Y +V E +LR A + KN  +I   N + L     + + +N F D +  EF +   G  +                +P+  DWR  G V+PVK+QG+C S W FS TGSLE    +  G+ + LSEQ L+DC  +     C+GG    AF+Y+K NGGL TEE+YPY G    C++ +EN    V D V I  G E+ L  AV  V P+SVA +
Sbjct:   35 KHGKAY-NVNEERLRRAVWEKNFKMIELHNWEYLEGKHDFTMTMNAFGDLTNTEFVKMMTGFRRQKIKRMHVFQDHQFLYVPKYVDWRMLGYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQNLLDCMGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPYIGPGRKCRYHAENSAANVRDFVQIP-GREEALMKAVAKVGPISVAVD 250          
The following BLAST results are available for this feature:
BLAST of CK935696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
CYSP4_BRANA6.447e-3438.30Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CPR1_ARATH8.420e-3439.73Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CATS_SAIBB1.876e-3337.67Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CATV_GVXN4.179e-3338.53Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CYSP2_HORVU5.457e-3341.40Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CATS_CANFA5.457e-3337.50Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATL6_HUMAN5.457e-3341.57Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CYSP1_HORVU7.128e-3341.40Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
CATS_MOUSE2.074e-3237.22Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
TEST2_MOUSE2.709e-3238.07Testin-2 OS=Mus musculus PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_F07 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935696 ID=CK935696; Name=CK935696; organism=Citrus sinensis; type=EST; length=921bp
GGGGAATCCGAAGCCCTTGAGTGCAGTGTGCTCTCTCCAAACAAAGCAGA
CACAATCATTAGGCATGGCTCGCCCCGTACAGTTGGTCTCGTCCGTCATC
TTGTTGCTTTGCTGCGCTGCCGCAGCATCAGCATCAGCATCAAGCTTCGA
CGACTCCAATCCGATCAGATTGGTATCATCGGACGGTCTCCGTGACTTCG
AGACCTCCGTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTCTCTCCTTT
GCCCGTTTTGCTCGCAGGTATGGGAAGATTTACGAGTCCGTTGAGGAGAT
GAAGCTCCGGTTCGCGACTTTCTCCAAGAACTTGGATTTAATCAGATCTA
CCAATTGTAAAGGCCTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGAC
TGGAGCTGGGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCGCAAAACTG
CTCTGCCACTACAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAG
AAACGAAAGACTGGAGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAA
GGTCACTGTGGATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGC
TGCTTACCACCAGGCCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGC
TTGTAGACTGTGCCCAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTG
CCATCCCAAGCCTTTGAATACATCAAGTACAATGGTGGCCTTGATACTGA
GGAAGCATATCCCTACACCGGAAAAGATGGTGTCTGCAAATTCTCATCTG
AAAATGTTGNCGTCCAAGTCCTGGACTCAGTCAACATTACCTTGGGTGCT
GAAGATGAATTACAGCATGCAGTTGGTCTTGTTCGACCTGTGAGTGTGGC
ATTTGAAGTAGTAGATGGATT
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