CK935702

Overview
NameCK935702
Unique NameCK935702
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length657
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_PECCP (Peptide methionine sulfoxide reductase msrB OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=msrB PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.230e-18
Identity = 51/129 (39.53%), Postives = 73/129 (56.59%), Query Frame = 1
Query:   61 DSVQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDG---RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFI 438
            DS  +T  +   +   +++ + +Q+GTEP  +G+       G Y+C  C   L+ S +K+DSGCGWP+F + +     R  + D    RR EI C  C  HLGHVF  +G KT T ER+CVNS S+ FI
Sbjct:    4 DSASRTPSDNTELTEMQRY-VTQQRGTEPAFSGKLLHNKRTGVYHCLCCQAPLFYSDSKYDSGCGWPSFDQPVSSEAVRYLEDDSHNMRRIEIRCGQCDAHLGHVFP-DGPKT-TGERYCVNSASLSFI 129          
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_LACPL (Peptide methionine sulfoxide reductase msrB OS=Lactobacillus plantarum GN=msrB PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.404e-17
Identity = 48/128 (37.50%), Postives = 72/128 (56.25%), Query Frame = 1
Query:   67 VQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGA-INRSPDPD--GRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIP 441
            + K + E R  L+PEQ+ + ++  TE   +GEY+  Y +G Y     G AL+ S  K+D+GCGWP+F + +    +N   D      RTE+T      HLGHVF  +G +     R+C+NS ++KFIP
Sbjct:    1 MDKQQGELRQRLTPEQYAVTQEAATERPFSGEYDNFYQEGIYVDVVSGQALFSSRDKYDAGCGWPSFTKPIDQTNLNEHRDESFGMHRTEVTSTQANSHLGHVFP-DGPRDRGGLRYCINSAALKFIP 127          
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_YERPY (Peptide methionine sulfoxide reductase msrB OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=msrB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.127e-17
Identity = 48/116 (41.38%), Postives = 63/116 (54.31%), Query Frame = 1
Query:  100 LSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDP---DGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFI 438
            LS  Q  + +++GTE   TG+      DG Y C  C   L+ S +KFDSGCGWP+FY+ +     R  D    +  R EI C  C  HLGHVF       PT ER+C+NS S+ F+
Sbjct:   14 LSDIQRYVTQERGTEAPFTGKLLHNKRDGVYQCLCCHQPLFISESKFDSGCGWPSFYQPIDADSIRYIDDYSHNMHRIEIRCGNCDAHLGHVFPDG--PQPTGERYCINSASLNFV 127          
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_YERPS (Peptide methionine sulfoxide reductase msrB OS=Yersinia pseudotuberculosis GN=msrB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.127e-17
Identity = 48/116 (41.38%), Postives = 63/116 (54.31%), Query Frame = 1
Query:  100 LSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDP---DGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFI 438
            LS  Q  + +++GTE   TG+      DG Y C  C   L+ S +KFDSGCGWP+FY+ +     R  D    +  R EI C  C  HLGHVF       PT ER+C+NS S+ F+
Sbjct:   14 LSDIQRYVTQERGTEAPFTGKLLHNKRDGVYQCLCCHQPLFISESKFDSGCGWPSFYQPIDADSIRYIDDYSHNMHRIEIRCGNCDAHLGHVFPDG--PQPTGERYCINSASLNFV 127          
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_YERPP (Peptide methionine sulfoxide reductase msrB OS=Yersinia pestis (strain Pestoides F) GN=msrB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.127e-17
Identity = 48/116 (41.38%), Postives = 63/116 (54.31%), Query Frame = 1
Query:  100 LSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDP---DGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFI 438
            LS  Q  + +++GTE   TG+      DG Y C  C   L+ S +KFDSGCGWP+FY+ +     R  D    +  R EI C  C  HLGHVF       PT ER+C+NS S+ F+
Sbjct:   14 LSDIQRYVTQERGTEAPFTGKLLHNKRDGVYQCLCCHQPLFISESKFDSGCGWPSFYQPIDADSIRYIDDYSHNMHRIEIRCGNCDAHLGHVFPDG--PQPTGERYCINSASLNFV 127          
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_YERPN (Peptide methionine sulfoxide reductase msrB OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=msrB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.127e-17
Identity = 48/116 (41.38%), Postives = 63/116 (54.31%), Query Frame = 1
Query:  100 LSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDP---DGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFI 438
            LS  Q  + +++GTE   TG+      DG Y C  C   L+ S +KFDSGCGWP+FY+ +     R  D    +  R EI C  C  HLGHVF       PT ER+C+NS S+ F+
Sbjct:   14 LSDIQRYVTQERGTEAPFTGKLLHNKRDGVYQCLCCHQPLFISESKFDSGCGWPSFYQPIDADSIRYIDDYSHNMHRIEIRCGNCDAHLGHVFPDG--PQPTGERYCINSASLNFV 127          
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_YERPG (Peptide methionine sulfoxide reductase msrB OS=Yersinia pestis bv. Antiqua (strain Angola) GN=msrB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.127e-17
Identity = 48/116 (41.38%), Postives = 63/116 (54.31%), Query Frame = 1
Query:  100 LSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDP---DGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFI 438
            LS  Q  + +++GTE   TG+      DG Y C  C   L+ S +KFDSGCGWP+FY+ +     R  D    +  R EI C  C  HLGHVF       PT ER+C+NS S+ F+
Sbjct:   14 LSDIQRYVTQERGTEAPFTGKLLHNKRDGVYQCLCCHQPLFISESKFDSGCGWPSFYQPIDADSIRYIDDYSHNMHRIEIRCGNCDAHLGHVFPDG--PQPTGERYCINSASLNFV 127          
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_YERPE (Peptide methionine sulfoxide reductase msrB OS=Yersinia pestis GN=msrB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.127e-17
Identity = 48/116 (41.38%), Postives = 63/116 (54.31%), Query Frame = 1
Query:  100 LSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDP---DGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFI 438
            LS  Q  + +++GTE   TG+      DG Y C  C   L+ S +KFDSGCGWP+FY+ +     R  D    +  R EI C  C  HLGHVF       PT ER+C+NS S+ F+
Sbjct:   14 LSDIQRYVTQERGTEAPFTGKLLHNKRDGVYQCLCCHQPLFISESKFDSGCGWPSFYQPIDADSIRYIDDYSHNMHRIEIRCGNCDAHLGHVFPDG--PQPTGERYCINSASLNFV 127          
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_YERPB (Peptide methionine sulfoxide reductase msrB OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=msrB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.127e-17
Identity = 48/116 (41.38%), Postives = 63/116 (54.31%), Query Frame = 1
Query:  100 LSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDP---DGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFI 438
            LS  Q  + +++GTE   TG+      DG Y C  C   L+ S +KFDSGCGWP+FY+ +     R  D    +  R EI C  C  HLGHVF       PT ER+C+NS S+ F+
Sbjct:   14 LSDIQRYVTQERGTEAPFTGKLLHNKRDGVYQCLCCHQPLFISESKFDSGCGWPSFYQPIDADSIRYIDDYSHNMHRIEIRCGNCDAHLGHVFPDG--PQPTGERYCINSASLNFV 127          
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_YERPA (Peptide methionine sulfoxide reductase msrB OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=msrB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.127e-17
Identity = 48/116 (41.38%), Postives = 63/116 (54.31%), Query Frame = 1
Query:  100 LSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDP---DGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFI 438
            LS  Q  + +++GTE   TG+      DG Y C  C   L+ S +KFDSGCGWP+FY+ +     R  D    +  R EI C  C  HLGHVF       PT ER+C+NS S+ F+
Sbjct:   14 LSDIQRYVTQERGTEAPFTGKLLHNKRDGVYQCLCCHQPLFISESKFDSGCGWPSFYQPIDADSIRYIDDYSHNMHRIEIRCGNCDAHLGHVFPDG--PQPTGERYCINSASLNFV 127          
The following BLAST results are available for this feature:
BLAST of CK935702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
MSRB_PECCP8.230e-1839.53Peptide methionine sulfoxide reductase msrB OS=Pec... [more]
MSRB_LACPL1.404e-1737.50Peptide methionine sulfoxide reductase msrB OS=Lac... [more]
MSRB_YERPY3.127e-1741.38Peptide methionine sulfoxide reductase msrB OS=Yer... [more]
MSRB_YERPS3.127e-1741.38Peptide methionine sulfoxide reductase msrB OS=Yer... [more]
MSRB_YERPP3.127e-1741.38Peptide methionine sulfoxide reductase msrB OS=Yer... [more]
MSRB_YERPN3.127e-1741.38Peptide methionine sulfoxide reductase msrB OS=Yer... [more]
MSRB_YERPG3.127e-1741.38Peptide methionine sulfoxide reductase msrB OS=Yer... [more]
MSRB_YERPE3.127e-1741.38Peptide methionine sulfoxide reductase msrB OS=Yer... [more]
MSRB_YERPB3.127e-1741.38Peptide methionine sulfoxide reductase msrB OS=Yer... [more]
MSRB_YERPA3.127e-1741.38Peptide methionine sulfoxide reductase msrB OS=Yer... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_E09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935702 ID=CK935702; Name=CK935702; organism=Citrus sinensis; type=EST; length=657bp
GCGGGGAAACACACCGCTGGTAAAAAAAGATTGNNNCCAAACCCCATNNN
TGCAGCAGCAGATTCCGTTCAGAAAACCGAGGAAGAATGGCGGGCCATTC
TCTCCCCCGAGCAGTTTAGGATTCTACGCCAGAAAGGAACCGAGCCGCGA
GGAACTGGGGAGTACAACAAGTTGTATGCGGATGGGTTTTACAACTGTGC
TGGCTGTGGAACTGCGCTTTACAAGTCTGTTACCAAATTCGATTCTGGAT
GTGGGTGGCCAGCTTTCTATGAAGGTCTTCCTGGAGCCATAAATCGCTCC
CCTGATCCTGATGGAAGGAGAACCGAGATAACTTGTGCTGCTTGCGGGGG
TCACTTGGGTCACGTCTTCAAAGGGGAGGGATTCAAAACGCCTACAGATG
AACGCCACTGTGTCAATAGTGTTTCAATTAAGTTTATTCCAGGTGATGCT
CCTGCTTCATCATGAAGAATGTAAGACTGTCATGGGGTTGTTGAATAAGA
TTTGACTGTTTGTCACTTCTGCCAATTGTTTTTGGCTTTAATGTCCTAGA
CATGGTGTTGTTTGTATAATTATTACGCGGCCAATATTAGCCTATGCCAT
AGTATAAACCACTTTGTTTGGTTTGCAGAAAAAAAAAAAAAAAAAAAAAA
AAAAAAA
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