CK935702

Overview
NameCK935702
Unique NameCK935702
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length657
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_SHIDS (Peptide methionine sulfoxide reductase msrB OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.155e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 1 
Query:   82 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 447
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSDMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGVQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_SHIBS (Peptide methionine sulfoxide reductase msrB OS=Shigella boydii serotype 4 (strain Sb227) GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.155e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 1 
Query:   82 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 447
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_ECOSM (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.155e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 1 
Query:   82 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 447
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_ECOSE (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain SE11) GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.155e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 1 
Query:   82 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 447
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_ECOLU (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.155e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 1 
Query:   82 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 447
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_ECOLI (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain K12) GN=msrB PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.155e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 1 
Query:   82 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 447
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_ECOLC (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.155e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 1 
Query:   82 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 447
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_ECOL6 (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O6 GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.155e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 1 
Query:   82 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 447
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_ECOL5 (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.155e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 1 
Query:   82 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 447
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of CK935702 vs. ExPASy Swiss-Prot
Match: MSRB_ECOHS (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O9:H4 (strain HS) GN=msrB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.155e-20
Identity = 54/125 (43.20%), Postives = 67/125 (53.60%), Query Frame = 1 
Query:   82 EEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 447
            EE +  LS  QF + +  GTEP  TG       DG Y+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++F  G+
Sbjct:    8 EELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
The following BLAST results are available for this feature:
BLAST of CK935702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
MSRB_SHIDS5.155e-2043.20Peptide methionine sulfoxide reductase msrB OS=Shi... [more]
MSRB_SHIBS5.155e-2043.20Peptide methionine sulfoxide reductase msrB OS=Shi... [more]
MSRB_ECOSM5.155e-2043.20Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOSE5.155e-2043.20Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOLU5.155e-2043.20Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOLI5.155e-2043.20Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOLC5.155e-2043.20Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOL65.155e-2043.20Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOL55.155e-2043.20Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOHS5.155e-2043.20Peptide methionine sulfoxide reductase msrB OS=Esc... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_E09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935702 ID=CK935702; Name=CK935702; organism=Citrus sinensis; type=EST; length=657bp
GCGGGGAAACACACCGCTGGTAAAAAAAGATTGNNNCCAAACCCCATNNN
TGCAGCAGCAGATTCCGTTCAGAAAACCGAGGAAGAATGGCGGGCCATTC
TCTCCCCCGAGCAGTTTAGGATTCTACGCCAGAAAGGAACCGAGCCGCGA
GGAACTGGGGAGTACAACAAGTTGTATGCGGATGGGTTTTACAACTGTGC
TGGCTGTGGAACTGCGCTTTACAAGTCTGTTACCAAATTCGATTCTGGAT
GTGGGTGGCCAGCTTTCTATGAAGGTCTTCCTGGAGCCATAAATCGCTCC
CCTGATCCTGATGGAAGGAGAACCGAGATAACTTGTGCTGCTTGCGGGGG
TCACTTGGGTCACGTCTTCAAAGGGGAGGGATTCAAAACGCCTACAGATG
AACGCCACTGTGTCAATAGTGTTTCAATTAAGTTTATTCCAGGTGATGCT
CCTGCTTCATCATGAAGAATGTAAGACTGTCATGGGGTTGTTGAATAAGA
TTTGACTGTTTGTCACTTCTGCCAATTGTTTTTGGCTTTAATGTCCTAGA
CATGGTGTTGTTTGTATAATTATTACGCGGCCAATATTAGCCTATGCCAT
AGTATAAACCACTTTGTTTGGTTTGCAGAAAAAAAAAAAAAAAAAAAAAA
AAAAAAA
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