CK935707
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935707 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 5.127e-30 Identity = 62/185 (33.51%), Postives = 89/185 (48.11%), Query Frame = 1 Query: 343 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXX--LPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNPDC 888 K ++ FFA HET CYI +++ A+ D PG+ YYGRGP+Q++WN NY G+ +G D L +PD +A DP +SFK+A+WFWM N+V+ G+G T ING +EC AV R+ ++ +C +FG+ PG N C Sbjct: 135 KREIAAFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM---------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285 HSP 2 Score: 43.1282 bits (100), Expect = 5.127e-30 Identity = 25/85 (29.41%), Postives = 36/85 (42.35%), Query Frame = 3 Query: 111 GSAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 365 G G G G G + + E F + + + C + FYT +F+ AA+++ GF N KREIAAFF Sbjct: 58 GPCWGSGGEAAAGMAGRKAGAGAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFF 142
BLAST of CK935707 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 5.133e-30 Identity = 56/184 (30.43%), Postives = 87/184 (47.28%), Query Frame = 1 Query: 343 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS--DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNPDC 888 K ++ FFA HET +CYI +++ +++ D +YYGRGP+Q++WN NY G A+G D L +P +A D V++FK+A+WFWM S H V+ G+G TT + +ECG + R+G++ +C + G+ PG N C Sbjct: 120 KREIAAFFAHATHETGH-------------FCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269 HSP 2 Score: 53.1434 bits (126), Expect = 5.133e-30 Identity = 29/87 (33.33%), Postives = 43/87 (49.43%), Query Frame = 3 Query: 126 CGSGVVCGERDTGHGTDGG-----ELGKIISREMFEDLLPYRNDAR--CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 365 CG G G +G G G + +++ F + +N A C + FYT AF+ A + +PGF + G++ KREIAAFF Sbjct: 44 CGDGCQSGPCRSGRGGGGSGGGGANVASVVTSSFFNGI---KNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFF 127
BLAST of CK935707 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 9.352e-29 Identity = 53/184 (28.80%), Postives = 86/184 (46.74%), Query Frame = 1 Query: 343 KEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS--DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNPDC 888 K ++ FFA HET +CYI +++ +++ D +YYGRGP+Q++WN NY G +G + L +P+ +A D V++FK+A+WFWM N+V+ G+G T ING +EC + R+G++ +C + + PG N C Sbjct: 131 KREIAAFFAHVTHETGH-------------FCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM---------------------NNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280 HSP 2 Score: 53.9138 bits (128), Expect = 9.352e-29 Identity = 30/81 (37.04%), Postives = 41/81 (50.62%), Query Frame = 3 Query: 129 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDAR--CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 365 G G G G G+ G + +++ F + +N A C + FYT AF+ A A+PGF + G E KREIAAFF Sbjct: 61 GGGGGGGGGGGGGGSGGANVANVVTDAFFNGI---KNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFF 138
BLAST of CK935707 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.760e-27 Identity = 52/156 (33.33%), Postives = 76/156 (48.72%), Query Frame = 1 Query: 433 YCYIRQVSPASSDXXXXXXXXXLPGQ----YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNPDC 888 +CYI ++ AS D P Y+GRGPIQL+WN NY G A D L P+ ++ D V+SFK+A+W+WM Q +P ++ G+G T ING +EC V+ R+ ++T +C + G+ GDN C Sbjct: 136 FCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM--QHVRPVINQ-------------------GFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270 HSP 2 Score: 46.2098 bits (108), Expect = 3.760e-27 Identity = 27/80 (33.75%), Postives = 38/80 (47.50%), Query Frame = 3 Query: 126 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFF 365 CG+G G T + I F + + + D+ C + FYT DAF+ A ++ FG G+E KREIAA F Sbjct: 47 CGTGCQQGPCTTASPPPSNNVNADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAF 126
BLAST of CK935707 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 6.667e-26 Identity = 71/194 (36.60%), Postives = 103/194 (53.09%), Query Frame = 1 Query: 304 FQALVTLEMKPCVKEKLLPFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYG-RGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGND--AVR-NRIGFFTTFCGKFGIQPG 873 F A T+ K ++ F A T+G +D +AWG C+I + +D G+ Y RGPIQLT N NY G+A+G DL+ NPDL+ DP++SFK+A+WFWM+ KPSCH++++ +AN A R+P G+ NII+ G+D AVR + IGF+ +C G+ G Sbjct: 167 FPAFGTIGDVATRKREVAAFLAHISQATSGERSDVEN-PHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVL-----NANSA-ANRIPNKGVIGNIISRAF-----GHDDFAVRSSSIGFYKRYCDMLGVSYG 348
BLAST of CK935707 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.719e-11 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 1 Query: 655 MTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 792 MT Q KPSCH+VI + W+P+A D AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46 The following BLAST results are available for this feature:
BLAST of CK935707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935707 ID=CK935707; Name=CK935707; organism=Citrus sinensis; type=EST; length=938bpback to top |