CK935715

Overview
NameCK935715
Unique NameCK935715
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12923 contig Csv1_Contig12923:1..869. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935715 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 2.703e-58
Identity = 113/214 (52.80%), Postives = 132/214 (61.68%), Query Frame = 3
Query:  186 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGG-NAAVRNRI 824
            L  II   MFDD+L+YRND +CPA GFYTY+AFI AA+ FP FGN+G++ MRKREIAAF  QT HET G WP A G +Y WGYC +                              NYNY  C             P+L+ TDP ++FK+A+WFWMT Q PKPSCH VI + W PSA D  AGR+PGYG+ TNIINGGIECGQGG N A  NRI
Sbjct:   85 LSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM------------------------------NYNYGLCGDDLNLPLL--QEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRI 266          
BLAST of CK935715 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.136e-56
Identity = 114/218 (52.29%), Postives = 142/218 (65.14%), Query Frame = 3
Query:  186 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEV----SPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRI 824
            +G +I++ +F+ +L  R++ +CPARGFYTYDAFI AA +FP FG SG    + +RE+AAFF QT HETTGG   +   ++ WGYCF  E+    SPP             YYGRGPIQL+   NY               NPDL++TD V+SFK+AIWFWMTAQ  KPSCH+VI+  W PSA D  AGR+PGYG+ TNIINGGIECG G N A  +RI
Sbjct:   32 VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGS-SDQFQWGYCFKEEINKATSPP-------------YYGRGPIQLTGQSNYQAAGNALGLDLV--GNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRI 233          
BLAST of CK935715 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.458e-51
Identity = 102/213 (47.89%), Postives = 132/213 (61.97%), Query Frame = 3
Query:  186 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRI 824
            +  +IS  +F+ +L +R        GFYTYDAFI AA++FP F  +G+  +RKRE+AAF AQT HETTGGWP AP G Y        E+   SDY           +GRGPIQ+S+NYNY               NPDL+ +D  + FK+A+WFWMT Q PKPS H+VI   W PS+ D  AGR+PGYG+ TNII+GG+ECG+G  + V +RI
Sbjct:    1 VSSVISSSLFEKMLLHR--------GFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPY--------ELGSTSDY-----------FGRGPIQISYNYNYGAAGKAIGVDLL--RNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRI 184          
BLAST of CK935715 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.458e-51
Identity = 99/215 (46.05%), Postives = 136/215 (63.26%), Query Frame = 3
Query:  186 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVR 815
            +  +++ + F+ +L +R+D  CPARGFY Y AF+ AA AFP F  +G+   RKRE+AAF AQT H T+       GG Y+WGYC+       SD+C PN  +PC  GK Y+ RGP+Q+++NYNY               NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+  +W P+  D  AGR PGYGLTTNI+ GG++C  G   A R
Sbjct:   97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNY--GAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGADR 302          
BLAST of CK935715 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.458e-51
Identity = 99/215 (46.05%), Postives = 136/215 (63.26%), Query Frame = 3
Query:  186 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVR 815
            +  +++ + F+ +L +R+D  CPARGFY Y AF+ AA AFP F  +G+   RKRE+AAF AQT H T+       GG Y+WGYC+       SD+C PN  +PC  GK Y+ RGP+Q+++NYNY               NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+  +W P+  D  AGR PGYGLTTNI+ GG++C  G   A R
Sbjct:   97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNY--GAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGADR 302          
BLAST of CK935715 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 3.555e-34
Identity = 77/197 (39.09%), Postives = 116/197 (58.88%), Query Frame = 3
Query:  195 IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVS-PPSDYC-DPNYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIIN 773
            +++  +FD +  +R D  CP++GFY+Y +F+ AA++FP FG  G+   RKRE+AAF A     T+G   D     +AWG C I+  +   +D+C   ++PC    KY  RGPIQL+ N+NY               NPDL+  DP++SFK+A+WFWM+    KPSCH++++     +AN   A R+P  G+  NII+
Sbjct:  133 VVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVE-NPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNY--GLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVL-----NANSA-ANRIPNKGVIGNIIS 318          
BLAST of CK935715 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.443e-29
Identity = 79/219 (36.07%), Postives = 111/219 (50.68%), Query Frame = 3
Query:  186 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCD---PNYPC-RGK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRI 824
            +  I++ E F  L+  + D+ C A+GFYT DAF+ AA  +P FG +G+    KREIAAFFA   HET               +C+I E+  PS +YCD     +PC  GK YYGRGP+Q+SWN+NY               +PD +A  PVL+F++A+W+W        + H+  +                G+G T   ING +EC      AV NR+
Sbjct:   68 VASIVTPEFFAALVA-QADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNY--GPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTN------NVHDAFVSG-------------QGFGATIRAINGALECDGKNPTAVSNRV 251          
BLAST of CK935715 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 4.971e-28
Identity = 76/210 (36.19%), Postives = 109/210 (51.90%), Query Frame = 3
Query:  195 IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRI 824
            I+++E +D +   +    CP + FYT   F+EA  A+PGFG    +  RKREIAA+FA   HET           +A  YC  S+  P    C+PN     +Y+GRGP+QLSWNYNY+             N+PD++  DP++SFK+++WFW+     +     VI+D   P+          G+G T  IINGG EC     A +  R+
Sbjct:   49 IVTQEFWDGIAS-QAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGHLCYIEERDGHANNYCQESQQYP----CNPN----KEYFGRGPMQLSWNYNYI--DAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI-----RKGVQYVILD---PN---------QGFGATIRIINGGQECDGHNTAQMMARV 230          
BLAST of CK935715 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.971e-28
Identity = 73/195 (37.44%), Postives = 97/195 (49.74%), Query Frame = 3
Query:  249 CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN---YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRN 818
            C  + FYT  AF+ A  A+PGF + G E   KREIAAFFA   HET               +C+ISE++  + YCD +   +PC    KYYGRGP+Q+SWNYNY               +P+ +A D V++FK+A+WFWM                     N+V+     G+G T   ING +EC  G N A  N
Sbjct:  100 CEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHET-------------GHFCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM---------------------NNVHGVMPQGFGATIRAINGALEC-NGNNPAQMN 257          
BLAST of CK935715 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.446e-27
Identity = 72/195 (36.92%), Postives = 97/195 (49.74%), Query Frame = 3
Query:  249 CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDP---NYPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRN 818
            C  + FYT  AF+ A + +PGF + G++   KREIAAFFA   HET               +C+ISE++  + YCDP    +PC    KYYGRGP+Q+SWNYNY               +P  +A D V++FK+A+WFWM       S H V+                 G+G TT  +   +ECG G N A  N
Sbjct:   89 CEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHET-------------GHFCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECG-GNNPAQMN 246          
The following BLAST results are available for this feature:
BLAST of CK935715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHIB_POPTR2.703e-5852.80Acidic endochitinase WIN6.2B OS=Populus trichocarp... [more]
CHI8_ORYSJ1.136e-5652.29Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIT_AVESA5.458e-5147.89Endochitinase (Fragments) OS=Avena sativa PE=1 SV=... [more]
CHI7_ORYSJ5.458e-5146.05Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI7_ORYSI5.458e-5146.05Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 ... [more]
AGI_URTDI3.555e-3439.09Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE... [more]
CHI6_ORYSJ3.443e-2936.07Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIT_DIOJA4.971e-2836.19Acidic endochitinase OS=Dioscorea japonica PE=1 SV... [more]
CHIA_MAIZE4.971e-2837.44Endochitinase A OS=Zea mays PE=1 SV=1[more]
CHIB_MAIZE1.446e-2736.92Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_E05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935715 ID=CK935715; Name=CK935715; organism=Citrus sinensis; type=EST; length=883bp
GGGGGACATACACCAAGCAGAGGATAATTGATATCATAACTGTTGCTTTC
AAAATGAGGCTTATTGGGTCCTTACTAATTTTCTCTCTAGTTTTATCTTT
TGTACTAGGAGGCTCAGCACAGAACTGTGGAAGCGGCGTTGTGTACGGTG
GACGTGATACCGGCCATGGGACGCATGGCGGTGAACTGGGCAAGATCATC
TCAAGGGAGATGTTTGATGACTTGCTTGAGTATAGAAATGATGAACGATG
CCCTGCCAGAGGCTTCTACACTTATGATGCTTTTATAGAGGCAGCCCAAG
CTTTTCCAGGCTTTGGTAACTCTGGAAATGAAACCATGCGTAAAAGAGAA
ATCGCTGCCTTTTTTGCCCAAACTGGCCATGAAACTACTGGGGGATGGCC
CGATGCACCTGGTGGCGAATATGCTTGGGGATATTGCTTTATAAGCGAAG
TTAGCCCTCCGTCCGACTACTGTGATCCTAACTATCCATGTCGAGGGAAG
TACTATGGCCGAGGTCCAATTCAACTCTCTTGGAATTACAATTACTTACG
GTGCGGAGAAGGCCTAGGGCTAGGAGAGGAGTTGTTGAACAATCCAGACC
TTCTTGCTACTGATCCAGTACTATCATTCAAGTCAGCAATCTGGTTCTGG
ATGACTGCACAGCCACCAAAGCCATCGTGCCACGAAGTCATTATCGACGA
ATGGAAACCATCAGCAAATGACGTAAACGCCGGCCGGCTTCCGGGATACG
GTCTAACCACAAATATAATCAACGGTGGAATTGAATGTGGCCAAGGTGGG
AATGCCGCTGTACGTAACCGTATTGGGTTCTTTACCACTTTCTGTGGCAA
GTTTGGGNNNNNGCCTGGTGACAGTCTTGATTG
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