CK935730

Overview
NameCK935730
Unique NameCK935730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935730 vs. ExPASy Swiss-Prot
Match: C519D_DICDI (Probable cytochrome P450 519D1 OS=Dictyostelium discoideum GN=cyp519d1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.367e-11
Identity = 50/185 (27.03%), Postives = 91/185 (49.19%), Query Frame = 2
Query:  185 LAVILIPLHLLRRRKL--NLPPGPK-SWPIIGNLNLFTGPAPHRSVDALCKKYGPIVQLKFGSFPVVVCSSVEMAKAILKSHDAIFAYRPKMAAGKYTGYNFSNITWSPYGPYFSQARKICTMELFTAKRLKSYEYIRVEELNALLKHL--YESSGKPIALKDHLADVSLNVISRVVLGKKYSNE 724
            + +I +   L+++ K   + PP PK + P+IG+L L  G  P+RS   L K+YG I ++  G +P VV +  +    +       F  RP   +       F N+++S Y P +S+ RK+ +   FT  ++K    +   + N L+  +  Y  + KP   K ++  ++LNV+  +   K+  N+
Sbjct:   10 ICIIYLLFDLIKKNKKLKDEPPTPKLALPLIGHLYLL-GDRPNRSFLELSKRYGGIFKIWMGEYPTVVLTDPDHVNEVWCKQFLNFTNRPHFNSLDQFSSGFRNLSFSDY-PLWSELRKLVSSS-FTKSKVKGISNLLETQTNYLINTMNNYSINNKPFNPKKYIHKLTLNVVCMIAFSKEIKND 191          
BLAST of CK935730 vs. ExPASy Swiss-Prot
Match: CP2D3_RAT (Cytochrome P450 2D3 OS=Rattus norvegicus GN=Cyp2d3 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.091e-11
Identity = 59/213 (27.70%), Postives = 100/213 (46.95%), Query Frame = 2
Query:  167 GAW-LATLAVILIPL----HLLRRRKLNLPPGPKSWPIIGNLNLFTGPAPHRSVDALCKKYGPIVQLKFGSFPVVVCSSVEMAKAILKSHDAIFAYRPKMAAGKYTGYNF--SNITWSPYGPYFSQARK--ICTMELFTAKRLKSYEYIRVEELNALLKHLYESSGKPIALKDHLADVSLNVISRVVLGKKYSNERQNGIEITRHELKEMIDE 778
            G W +A   VI I L    H  +R     PPGP  WP++GNL          S+  L  +YG +  L+ G  PVVV + ++  + +L +     A RP+M   ++ GY      +  +PYGP + + R+  + T+  F   + KS E    +E + L   L   +G+P+     L     NVI+ ++  +++     + I++ +  LKE + E
Sbjct:    8 GLWPMAIFTVIFILLVDLMHRRQRWTSRYPPGPVPWPVLGNLLQVDLCNMPYSMYKLQNRYGDVFSLQMGWKPVVVINGLKAVQELLVTCGEDTADRPEMPIFQHIGYGHKAKGVVLAPYGPEWREQRRFSVSTLRNFGVGK-KSLEQWVTDEASHLCDALTAEAGRPLDPYTLLNKAVCNVIASLIYARRFDYGDPDFIKVLK-ILKESMGE 218          
BLAST of CK935730 vs. ExPASy Swiss-Prot
Match: C79F2_ARATH (Hexahomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F2 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.091e-11
Identity = 52/216 (24.07%), Postives = 99/216 (45.83%), Query Frame = 2
Query:  236 LPPGPKSWPIIGNLN--LFTGPAPHRSVDALCKKYGPIVQLKFGSFPVVVCSSVEMAKAILKSHDAIFAYRPKMAAGKYTGYNFSNITWSPYGPYFSQARKICTMELFTAKRLKSYEYIRVEELNALLKHLYE--SSGKPIALKDHLADVSLNVISRVVLGKK-------YSNERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQG 850
            LPPG   WPI+GNL   + T P       A+ +    I    F     +  +S E+A+   +  DA  A RP+++  +  G N+  +  S YG +F + +K+ T E+ + K L   E  R  E + L+ +++      + + +++        V  R++ G++       +S++ + G +  +H L+ + + L  L G   +     WLG  ++ G
Sbjct:   44 LPPGRPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIVESIGDNYKTMGTSSYGEHFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRMLFGRRHVTKENMFSDDGRLG-KAEKHHLEVIFNTLNCLPGFSPVDYVDRWLGGWNIDG 258          
BLAST of CK935730 vs. ExPASy Swiss-Prot
Match: CP2J6_MOUSE (Cytochrome P450 2J6 OS=Mus musculus GN=Cyp2j6 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.037e-11
Identity = 56/219 (25.57%), Postives = 96/219 (43.84%), Query Frame = 2
Query:  176 LATLAVILIPLHLLRRRKLNLPPGPKSWPIIGNLNLFTGPAPHRSVDALCKKYGPIVQLKFGSFPVVVCSSVEMAKAILKSHDAIFAYRPKMAAGKYTGYNFSNITWSPYGPYFSQARKICTMELFT-AKRLKSYEYIRVEELNALLKHLYESSGKPIALKDHLADVSLNVISRVVLGKKYSNERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWL 829
            +A +  +L+  +   RR  N PPGP   P +GN+       PH S+  L KKYG I  L  G    VV + + + K  L   +     RP ++  +    N + + +S  G  + + R+   M L       KS E    EE + L++ + E  GKP      + +   N+I  V  G+++        E+ R   + M  E  +++ +++I    PW+
Sbjct:   23 VAAVTFLLLADYFKNRRPKNYPPGPWGLPFVGNIFQLDFGQPHLSIQPLVKKYGNIFSLNLGDITSVVITGLPLIKEALTQMEQNIMNRP-LSVMQERISNKNGLIFSS-GQIWKEQRRFALMTLRNFGLGKKSLEERMQEEASHLVEAIREEEGKPFNPHFSINNAVSNIICSVTFGERFDYHDSRFQEMLRLLDEVMYLETTMISQLYNI---FPWI 236          
BLAST of CK935730 vs. ExPASy Swiss-Prot
Match: CP1B1_MOUSE (Cytochrome P450 1B1 OS=Mus musculus GN=Cyp1b1 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.037e-11
Identity = 61/228 (26.75%), Postives = 99/228 (43.42%), Query Frame = 2
Query:  179 ATLAVILIPLHLLR---RRKLNLPPGPKSWPIIGNLNLFTGPAPHRSVDALCKKYGPIVQLKFGSFPVVVCSSVEMAKAILKSHDAIFAYRPKMAAGKYTGYNFSNITWSPYGPYFSQARK--ICTMELFTAKR------LKSYEYIRVEELNALLKHLYESSGKPIALKDHLADVSLNVISRVVLGKKYSNERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWL 829
            + LA + +   LLR   R+  + PPGP  WP+IGN     G A H     L ++YG + Q++ GS PVVV +        L    +IFA RP  A+ +      S + +  Y  ++   R+    TM  F+ +       L+ +      EL A+L     + G  +     +     NV+S V  G +Y+++    +E+  H      +E     G   + D +PWL
Sbjct:   28 SVLAAVHLGQWLLRQWQRKPWSSPPGPFPWPLIGNAAA-VGQASHLYFARLARRYGDVFQIRLGSCPVVVLNGESAIHQALVQQGSIFADRPPFASFRVVSGGRS-LAFGHYSEHWKTQRRSAYSTMRAFSTRHPRSRGLLEGHALAEARELVAVLVRRC-AGGAFLDPTQPVIVAVANVMSAVCFGCRYNHDDAEFLELLSHN-----EEFGRTVGAGSLVDVLPWL 247          
BLAST of CK935730 vs. ExPASy Swiss-Prot
Match: CP2DA_MOUSE (Cytochrome P450 2D10 OS=Mus musculus GN=Cyp2d10 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.273e-11
Identity = 63/241 (26.14%), Postives = 108/241 (44.81%), Query Frame = 2
Query:  164 WGAWLATLAVILIP--LHLLRRRKLNLPPGPKSWPIIGNLNLFTGPAPHRSVDALCKKYGPIVQLKFGSFPVVVCSSVEMAKAILKSHDAIFAYRPKMAAGKYTGY--NFSNITWSPYGPYFSQARK--ICTMELFTAKRLKSYEYIRVEELNALLKHLYESSGKPIALKDHLADVSLNVISRVVLGKKYSNE------RQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQG 850
            W   + T+  IL+   +H  +R     PPGP  WP++GNL          S+  L  +YG +  L+ G  P+VV + ++  K +L +     A RP++   +Y G       +  +PYGP + + R+  + T+  F   + KS E    +E   L       +G+PI     L +   NVI+ ++  +++  E       Q  +E +  E+  +I E++    +F I   IP L     QG
Sbjct:   10 WSVAIFTVIFILLVDLMHRHQRWTSRYPPGPVPWPVLGNLLQVDLDNMPYSLYKLQNRYGDVFSLQMGWKPMVVINGLKAMKEVLLTCGEDTADRPQVPIFEYLGVKPGSQGVVLAPYGPEWREQRRFSVSTLRNFGLGK-KSLEDWVTKEARHLCDAFTAQAGQPINPNTMLNNAVCNVIASLIFARRFEYEDPYLIRMQKVLEDSLTEISGLIPEVL---NMFPILLRIPGLPGKVFQG 246          
BLAST of CK935730 vs. ExPASy Swiss-Prot
Match: CP1B1_RAT (Cytochrome P450 1B1 OS=Rattus norvegicus GN=Cyp1b1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.273e-11
Identity = 60/229 (26.20%), Postives = 100/229 (43.67%), Query Frame = 2
Query:  176 LATLAVILIPLHLLR---RRKLNLPPGPKSWPIIGNLNLFTGPAPHRSVDALCKKYGPIVQLKFGSFPVVVCSSVEMAKAILKSHDAIFAYRPKMAAGKYTGYNFSNITWSPYGPYFSQARKIC--TMELFTAKR------LKSYEYIRVEELNALLKHLYESSGKPIALKDHLADVSLNVISRVVLGKKYSNERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWL 829
            ++ LA++ +   LLR   R+  + PPGP  WP+IGN     G A H     L ++YG + Q++ GS PVVV +        L     +FA RP  A+ +      S + +  Y   + + R+    TM  F+ +       L+ +      EL A+L     + G  +     +     NV+S V  G +Y+++    +E+  H      +E     G   + D +PWL
Sbjct:   27 VSVLAIVHLGQWLLRQWRRKPWSSPPGPFPWPLIGNA-ASVGRASHLYFARLARRYGDVFQIRLGSCPVVVLNGESAIHQALVQQGGVFADRPPFASFRVVSGGRS-LAFGHYSERWKERRRAAYGTMRAFSTRHPRSRGLLEGHALGEARELVAVLVRRC-AGGACLDPTQPIIVAVANVMSAVCFGCRYNHDDAEFLELLSHN-----EEFGRTVGAGSLVDVMPWL 247          
BLAST of CK935730 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.886e-11
Identity = 54/190 (28.42%), Postives = 90/190 (47.37%), Query Frame = 2
Query:  293 PAPHRSVDALCKKYGPIVQLKFGSFPVVVCSSVEMAKAILKSHDAIFAYRPKMAAGKYTGYNFSNITWSPYGPYFSQARKICTMELFTAKRLKSYEYIRVEELNALLKHLY--ESSGKPIALKDHLADVSLNVISRVVLGKKYSNERQNGIEITRHELKEMIDELILLNGVFDIGDSIPWLGFLDLQGNI 856
            P P R       +   ++    G  P VV S    A+ +L +H + FA RP   + +   +  + I ++P G Y+ + R++ +  LF+ +R+ S+E  R  +  A+L+ +   +S+   +AL+ HL   +LN I   V G +Y      G     H LK M+ E   L G F+  D +PWL  L    N+
Sbjct:   94 PRPRRDGPRRRPRAKELMAFSVGDTPAVVSSCPATAREVL-AHPS-FADRPVKRSARELMFARA-IGFAPNGEYWRRLRRVASTHLFSPRRVASHEPGRQGDAEAMLRSIAAEQSASGAVALRPHLQAAALNNIMGSVFGTRYDVTSGAGAAEAEH-LKSMVREGFELLGAFNWSDHLPWLAHLYDPSNV 279          
BLAST of CK935730 vs. ExPASy Swiss-Prot
Match: C77A1_SOLME (Cytochrome P450 77A1 (Fragment) OS=Solanum melongena GN=CYP77A1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.886e-11
Identity = 51/191 (26.70%), Postives = 86/191 (45.03%), Query Frame = 2
Query:  233 NLPPGPKSWPIIGNLNLFTGPAPH--RSVDALCKKYGPIVQLKFGSFPVVVCSSVEMAKAILKSHDAIFAYRPKMAAGK-YTGYNFSNITWSPYGPYFSQARKICTMELFTAKRLKSYEYIRVEELNALLKHL----YESSGKPIALKDHLADVSLNVISRVVLGKKYSNERQNGIEITRHELKEMIDELI 784
            NLPPGP  WPI+GNL    G        +  L  KYG I  LK GS  +++ +S E+A   L     IFA RP+    +     N  ++  + YGP +   R+     + +  RLK +   R   ++ L++ +     E++    ALK+    V   +++              G+E+   E+ E +D+++
Sbjct:   26 NLPPGPPGWPIVGNLFQVAGSGKQFFEYIRDLKPKYGSIFTLKMGSRTMIIVASAELAHEALIQKGQIFASRPRENPTRTIFSCNKFSVNAAVYGPVWRSLRRNMVQNMLSPSRLKEFREFREIAMDKLIERIRVDAKENNDVVWALKNARFAVFYILVAMCF-----------GVEMDNEEMIERVDQMM 205          
The following BLAST results are available for this feature:
BLAST of CK935730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 149
Match NameE-valueIdentityDescription
C519D_DICDI2.367e-1127.03Probable cytochrome P450 519D1 OS=Dictyostelium di... [more]
CP2D3_RAT3.091e-1127.70Cytochrome P450 2D3 OS=Rattus norvegicus GN=Cyp2d3... [more]
C79F2_ARATH3.091e-1124.07Hexahomomethionine N-hydroxylase OS=Arabidopsis th... [more]
CP2J6_MOUSE4.037e-1125.57Cytochrome P450 2J6 OS=Mus musculus GN=Cyp2j6 PE=2... [more]
CP1B1_MOUSE4.037e-1126.75Cytochrome P450 1B1 OS=Mus musculus GN=Cyp1b1 PE=2... [more]
CP2DA_MOUSE5.273e-1126.14Cytochrome P450 2D10 OS=Mus musculus GN=Cyp2d10 PE... [more]
CP1B1_RAT5.273e-1126.20Cytochrome P450 1B1 OS=Rattus norvegicus GN=Cyp1b1... [more]
C78A1_MAIZE6.886e-1128.42Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C77A1_SOLME6.886e-1126.70Cytochrome P450 77A1 (Fragment) OS=Solanum melonge... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_C08 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935730 ID=CK935730; Name=CK935730; organism=Citrus sinensis; type=EST; length=856bp
TTTTTTTTTTTTAAATGACTAACAAACAATTAAAGAATTACGTGAGACTA
ATTTTGTGTCATCTGTAGCTGTCAATAAGTACCTCCCAAAAAAGTGCTTC
AACATACAGAGTTGGATAGTTACAACGACAATGGAGCTCACTCATCATTC
TTGGGTTTCCTGCTGGGGCGCATGGCTGGCTACCCTGGCCGTCATCCTCA
TCCCTCTGCATCTCCTCCGCCGCCGGAAACTCAACTTACCACCAGGCCCA
AAATCCTGGCCGATCATTGGAAACCTCAATCTCTTCACGGGCCCAGCTCC
CCACCGGTCCGTGGATGCCCTGTGCAAAAAATATGGGCCCATTGTGCAGC
TCAAATTTGGGTCATTCCCTGTTGTCGTGTGCTCCTCTGTCGAGATGGCT
AAGGCTATTCTCAAAAGTCATGACGCTATTTTTGCTTATCGGCCCAAAAT
GGCTGCCGGCAAGTACACAGGCTACAATTTCTCAAATATCACATGGTCAC
CTTATGGTCCATACTTTAGTCAGGCACGTAAAATATGCACGATGGAATTG
TTTACTGCCAAACGCCTAAAGTCATATGAGTATATAAGAGTAGAAGAATT
AAATGCGCTTCTTAAACACTTGTATGAATCATCTGGAAAGCCTATTGCGT
TGAAAGATCATCTTGCAGACGTGAGTCTTAACGTTATAAGTCGTGTGGTC
TTAGGGAAAAAATATTCAAATGAGCGTCAAAATGGGATTGAGATCACACG
ACATGAGTTGAAGGAAATGATCGATGAATTGATTCTGCTTAATGGTGTAT
TTGATATCGGGGATTCGATTCCATGGCTAGGGTTCTTGGATTTGCAGGGT
AACATA
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