CK935731

Overview
NameCK935731
Unique NameCK935731
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_PROMM (Protein grpE OS=Prochlorococcus marinus (strain MIT 9313) GN=grpE PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.220e-21
Identity = 55/154 (35.71%), Postives = 93/154 (60.39%), Query Frame = 3
Query:  432 EAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGII 893
            E  S+     ++D EAR+  ++ E        SSL  E  + + +  R+ ADF+N RKR  +++  +R       +  +L +VD+FERAR Q++P+ E+ + +  SYQG+YKQ V++++ M  A++  VG+ FDP +HEA++RE SEE  E ++
Sbjct:   33 EGQSSAQSAPLADNEARLQQLEQEH-------SSLREEHETLRSQYMRIAADFDNFRKRQSRDQDDLRFQLICTTLSEILPVVDNFERARQQLEPQGEEAQALHRSYQGLYKQLVDVLKQMGVASMRVVGQVFDPTLHEAVSREPSEEHPEDVV 179          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_GLOVI (Protein grpE OS=Gloeobacter violaceus GN=grpE PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.220e-21
Identity = 54/158 (34.18%), Postives = 96/158 (60.76%), Query Frame = 3
Query:  423 AYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            +Y EA +       S  EA  F+ + +  +L  + S L  ++   ++K TRL ADF+N RKR+++E+  +      ++++ +L + D+F+RAR   +P+ E+E+K+  SYQ +Y+QF+ ++  M   A+  +G+PFDPA HEAI REES   ++  ++
Sbjct:   17 SYAEAATT----EASAAEATGFIARID--QLAAENSDLQKKLADYEQKYTRLMADFDNFRKRTQREKDELAYFVSAKLLKDILPVFDNFDRARAFAQPDNEREEKLHNSYQQVYRQFLSVLEKMGVTAMEAIGQPFDPAQHEAILREESAGVSQETVV 168          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_SYNSC (Protein grpE OS=Synechococcus sp. (strain CC9605) GN=grpE PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.593e-21
Identity = 60/176 (34.09%), Postives = 99/176 (56.25%), Query Frame = 3
Query:  366 ASGSEADQKHLLNLKTLIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGII 893
            AS  E DQ  +      + A +E+  +  E A S+  +      +   +L +++S+L  E  +   +  R+ ADF+N RKR  +++  +R       +  +L +VD+FERAR Q+ PE E+ + +  SYQG+YKQ VE+++    A +  VG+ FDP +HEA+ REES EF E ++
Sbjct:    5 ASTPEQDQNVVSGA---VPATRESSPDAPE-ATSEQASAAVDPADRMQQLEQELSALKQEHDTLNSQYMRIAADFDNFRKRQSRDQDDMRKQLVCSTLTEILPVVDNFERARQQLNPEGEEAQALHRSYQGLYKQLVEVLKQQGVARMDVVGQEFDPNLHEAVLREESSEFAEDVV 176          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_SYNY3 (Protein grpE OS=Synechocystis sp. (strain PCC 6803) GN=grpE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.080e-21
Identity = 53/141 (37.59%), Postives = 86/141 (60.99%), Query Frame = 3
Query:  474 EARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            E  I ++Q +     ++++  S ++ S K++   L A+F+N RKR+++E+       +G  I  LL +VD+FERAR QIKP ++ E +I  SYQG+YK  V+ ++ +  A +   GKPFDP  HEA+ RE + E+ E  +I
Sbjct:   69 EEIIAILQKDLASHRQELAEQSEQLDSIKKRYVALAAEFDNFRKRTQREKEEQAKLIKGRTITELLPVVDNFERARTQIKPNSDGENQIHKSYQGVYKNLVDSLKGLGVAPMRPEGKPFDPKYHEAMLREPTAEYPEDTVI 209          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_PROM3 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9303) GN=grpE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.080e-21
Identity = 55/153 (35.95%), Postives = 92/153 (60.13%), Query Frame = 3
Query:  435 AVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGII 893
            A  N DE   S   A +   +    +L ++ SSL  E  + + +  R+ ADF+N RKR  +++  +R       +  +L +VD+FERAR Q++P+ E+ + +  SYQG+YKQ VE+++ +  A++  VG+ FDP +HEA++RE SEE  E ++
Sbjct:   27 ASMNSDEGQPSAQSAPLADNEARLQQLEQEHSSLREEHETLRSQYMRIAADFDNFRKRQSRDQDDLRLQLICTTLSEILPVVDNFERARQQLEPQGEEAQALHRSYQGLYKQLVEVLKQLGVASMRVVGQAFDPTLHEAVSREPSEEHPEDVV 179          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_PROM2 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9215) GN=grpE PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.717e-21
Identity = 61/180 (33.89%), Postives = 101/180 (56.11%), Query Frame = 3
Query:  360 EQASGSEADQKHLLNLKTLIEAYKEAVSNGDEK-AVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            EQ S +E D+        L    KEA++  + K  +S+ +AR+  ++ E   L              K +  R+ ADF+N RKR  +++  ++     + +  +L +VD+FERAR Q++PE+E+ + +  SYQG+YKQ VE+++    + +  VG+ FDP +HEA+ RE SEE +E  II
Sbjct:   29 EQNSTNENDE--------LTSQKKEAINTEELKNTISNNDARLKQLEKEHETL--------------KNQYVRISADFDNFRKRQSRDQDDLKIQIVSKTLTAILPIVDNFERARQQLQPESEEAQALHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPNLHEAVLREPSEESDEDFII 186          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_PROM4 (Protein grpE OS=Prochlorococcus marinus (strain MIT 9211) GN=grpE PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.548e-21
Identity = 58/165 (35.15%), Postives = 96/165 (58.18%), Query Frame = 3
Query:  402 NLKTLIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            +L  + E  +EA   G E  V+  +A+    Q   NE   ++  L  E  +   +  R+ ADF+N RKR  +++  +R   Q   +  +L +VD+F+RAR Q+ PE E+ + +  SYQG+YKQ V++++ +  A +  VG+ FDP++HEA+ RE S+E  E II+
Sbjct:   33 SLSNVAEGSQEA---GAETDVTSSDAKDSSSQALDNEA--RLEQLEREHETLNSQYMRIAADFDNFRKRQSRDQDDLRLQLQCNTLSSILPVVDNFDRARQQLNPEGEEAQALHKSYQGLYKQLVDVLKQLGVAPMRVVGQTFDPSLHEAVLREPSDELAEDIIV 192          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_SYNS9 (Protein grpE OS=Synechococcus sp. (strain CC9902) GN=grpE PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.634e-21
Identity = 49/132 (37.12%), Postives = 83/132 (62.88%), Query Frame = 3
Query:  498 NEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGII 893
            N   +L ++++SL  E  + + +  R+ ADF+N RKR  +++  +R       +  +L +VD+FERAR Q+ PE E+ + +  SYQG+YKQ V++++    A +  VG+ FDP +HEA+ REE++E  E I+
Sbjct:   49 NRLQQLEQELNSLKQEHEAVQSQYMRIAADFDNFRKRQARDQDDLRQQLVCSTLTEILPVVDNFERARQQLNPEGEEAQALHRSYQGLYKQLVDVLKQQGVARMEVVGQEFDPTLHEAVLREENQEHAEDIV 180          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_SYNJA (Protein grpE OS=Synechococcus sp. (strain JA-3-3Ab) GN=grpE PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.634e-21
Identity = 47/128 (36.72%), Postives = 84/128 (65.62%), Query Frame = 3
Query:  510 ELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGII 893
            +L +++     ++   +E   RL ADFEN R+R+++E+       + + +  +L +VDSFERA+ Q+K ET++E+++  SYQ +Y+  VE ++ M  + + +VG+PFDP +HEAIAR+ S E+ E ++
Sbjct:   54 QLQQELEITRQQLKEKEESYIRLYADFENYRRRTQREKEEFSQKERQKFVLEILPVVDSFERAQQQLKLETDREREVHNSYQSVYRLLVECLKKMGVSRMKSVGQPFDPNLHEAIARQPSSEYPEDVV 181          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_SYNPX (Protein grpE OS=Synechococcus sp. (strain WH8102) GN=grpE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.032e-20
Identity = 48/129 (37.21%), Postives = 81/129 (62.79%), Query Frame = 3
Query:  510 ELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            +L  ++ +L  E  + + +  R+ ADF+N RKR  +++  +R       +  +L +VD+FERAR Q+ PE+E+ + +  SYQG+YKQ V++++    A +  VG+ FDP +HEA+ REES E  E ++I
Sbjct:   48 QLEHELQTLKQEHETLQSQYMRIAADFDNFRKRQSRDQEDIRQQLVCSTLSEILPVVDNFERARQQLNPESEEAQALHRSYQGLYKQLVDVLKQQGVARMEVVGQLFDPTLHEAVLREESTEQPEDVVI 176          
The following BLAST results are available for this feature:
BLAST of CK935731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
GRPE_PROMM1.220e-2135.71Protein grpE OS=Prochlorococcus marinus (strain MI... [more]
GRPE_GLOVI1.220e-2134.18Protein grpE OS=Gloeobacter violaceus GN=grpE PE=3... [more]
GRPE_SYNSC1.593e-2134.09Protein grpE OS=Synechococcus sp. (strain CC9605) ... [more]
GRPE_SYNY32.080e-2137.59Protein grpE OS=Synechocystis sp. (strain PCC 6803... [more]
GRPE_PROM32.080e-2135.95Protein grpE OS=Prochlorococcus marinus (strain MI... [more]
GRPE_PROM22.717e-2133.89Protein grpE OS=Prochlorococcus marinus (strain MI... [more]
GRPE_PROM43.548e-2135.15Protein grpE OS=Prochlorococcus marinus (strain MI... [more]
GRPE_SYNS94.634e-2137.12Protein grpE OS=Synechococcus sp. (strain CC9902) ... [more]
GRPE_SYNJA4.634e-2136.72Protein grpE OS=Synechococcus sp. (strain JA-3-3Ab... [more]
GRPE_SYNPX1.032e-2037.21Protein grpE OS=Synechococcus sp. (strain WH8102) ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_C09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935731 ID=CK935731; Name=CK935731; organism=Citrus sinensis; type=EST; length=897bp
GCCGGGGGGAAGGCAGCACCCAGCTGNNNAGCGAAAACCCTTTGGTGTGA
ATATTGAAAACATAATAAAAGCTAAATTGAGGAAGAGAAAACAGCTCTTG
ACTAAAAGAGTAGGCGTTAATAAATTATCCATCAGTCGAAGTCAATCGAA
TGGCTGTTGCGCTCTCAAACCACTCCTTCTTAGCTTCTCCGCGCCTTTCT
TCTTCTGCTTCTCTGTATAGACACAGAAAAACCCTAGCCCTTCGCTCTTT
CAATCGGAGACCTCCTCTCTTAAACCTAGAACTTCCCCTTCACAACAATA
CCGGGCCTGGCTTCAAGTCTTTCTTCGCTATAAATAACAAGGAGGGTTTC
CATGATGGTGAACAAGCCTCTGGAAGTGAAGCAGATCAGAAACATCTGTT
GAATCTGAAGACGTTGATTGAAGCCTACAAGGAGGCTGTGTCTAATGGAG
ATGAAAAGGCTGTATCTGATATTGAAGCTCGAATTTTTGTAGTACAAAAT
GAGAAGAATGAATTGTTACGCAAAGTTTCCTCACTATCAGCGGAGATAAC
CTCTGGGAAGGAGAAATGCACCCGCTTGCAAGCAGATTTTGAAAATTCTA
GGAAGAGATCAGAGAAGGAGAGGCTGGCTGTAAGGTCTGATGCCCAGGGC
GAAGTGATTGAGAGACTTTTGCTTTTGGTGGACAGTTTTGAGAGAGCGAG
ACTGCAAATCAAACCAGAGACAGAAAAGGAGAAAAAGATAGATACAAGTT
ATCAAGGTATATATAAGCAATTTGTGGAGATCATGAGGAGCATGCAAGCA
GCTGCAGTGCCAACTGTGGGAAAACCTTTTGATCCCGCGGTGCATGAGGC
CATTGCACGAGAGGAATCTGAAGAGTTCAATGAAGGGATTATTATTG
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