CK935731

Overview
NameCK935731
Unique NameCK935731
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_SYNJB (Protein grpE OS=Synechococcus sp. GN=grpE PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.923e-20
Identity = 45/128 (35.16%), Postives = 84/128 (65.62%), Query Frame = 3
Query:  510 ELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGII 893
            +L  ++  +  ++   ++   RL ADFEN R+R+++E+       + + +  +L +VDSFERA+ Q+K ET++E+++  SYQ +Y+  VE ++ M  + + +VG+PFDP +HEAIAR+ S ++ E ++
Sbjct:   54 QLQHELEVVRQQLKEKEDAYLRLYADFENYRRRTQREKEEFSQKERQKFVLEILPVVDSFERAQQQLKLETDRERELHNSYQSVYRLLVECLKKMGVSRMKSVGQPFDPNLHEAIARQPSPDYPEDVV 181          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_PROM1 (Protein grpE OS=Prochlorococcus marinus (strain NATL1A) GN=grpE PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.947e-19
Identity = 55/162 (33.95%), Postives = 90/162 (55.56%), Query Frame = 3
Query:  417 IEAYKEAVSNGDEKAV--SDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            ++  KE  S   E  +  SD EAR+  ++ E   L                +  R+ ADF+N RKR  +++  ++       +  +L +VD+FERAR Q+ PE E+ + +  SYQG+YKQ VE+++++  A +  V + FDP++HEA+ RE S+E  E I+I
Sbjct:   56 VDTAKEQSSTSCESNIKGSDTEARLQQLEKEHETL--------------NSQYMRIAADFDNFRKRQTRDQDDLKIQLTCTTLSEILPIVDNFERARQQLNPEGEEAQALHRSYQGLYKQLVEVLKNLGVAPMRVVDQAFDPSLHEAVMREPSDEKAEDIVI 203          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_PROMT (Protein grpE OS=Prochlorococcus marinus (strain NATL2A) GN=grpE PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.543e-19
Identity = 50/155 (32.26%), Postives = 92/155 (59.35%), Query Frame = 3
Query:  432 EAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            ++V   +E++ +  E+ I     + ++   ++  L  E  +   +  R+ ADF+N RKR  +++  ++       +  +L +VD+FERAR Q+ PE E+ + +  SYQG+YKQ VE+++++  A +  V + FDP++HEA+ RE S+E  E I+I
Sbjct:   54 DSVDTANEQSSTSCESNI-----KGSDTEARLQQLEKEHETLNSQYMRIAADFDNFRKRQTRDQDDLKIQLTCTTLSEILPIVDNFERARQQLNPEGEEAQALHRSYQGLYKQLVEVLKNLGVAPMRVVDQAFDPSLHEAVMREPSDEKAEDIVI 203          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_PROMA (Protein grpE OS=Prochlorococcus marinus GN=grpE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.399e-19
Identity = 57/177 (32.20%), Postives = 100/177 (56.50%), Query Frame = 3
Query:  381 ADQKHLLNLKTLIEAYKEAVSNG---DEKAVSDIEARIFVVQNEKNELLR--KVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            ADQ+ + + ++ +   +E VS     D+ +++D E     +Q+ K  L    ++  L  E  + + +  R+ ADF+N RKR  +++  ++       +  +L +VD+FERAR QI PE E+   I  +YQ +YKQ V++++ +  A +  VG+ FDP +HEA+ RE SE   E +I+
Sbjct:   15 ADQEVIASEESDLSPKEEKVSESTIDDDDSLNDAE-----LQSNKQTLDNEARLEQLEKEHETLRSQYVRIAADFDNFRKRQSRDQDDLKLQLTCNTLSEILPVVDNFERARQQINPEGEEALTIHRNYQNLYKQLVDVLKKLGVAPMRVVGQSFDPTLHEALLREPSELMVEDMIL 186          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_TRIEI (Protein grpE OS=Trichodesmium erythraeum (strain IMS101) GN=grpE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.663e-19
Identity = 56/174 (32.18%), Postives = 96/174 (55.17%), Query Frame = 3
Query:  378 EADQKHLLNLKTLIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLR-KVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            E+ QK  +   T + A   ++    +   S  + +  V+  E  ELL+ ++ +   ++   + +  RL ADF+N RKR++KE+  + +  +   I  LL ++D+FERAR  IKP  + E  I  SYQ +YKQ V+ ++ +  + +   G+ FDP +HEA+ RE + E  EG +I
Sbjct:   32 ESSQK--VESDTELSADNASIDTDIQSTESTSKEKDQVLLKEAYELLQTQLETTKYQLEEKESQYKRLGADFDNFRKRTQKEKEDLDTQVKCSTIMELLPVIDNFERARSHIKPANDGEMAIHKSYQSVYKQMVDSLKRLGVSVMRPEGQEFDPNLHEAVMREATAEHPEGTVI 203          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_SYNPW (Protein grpE OS=Synechococcus sp. (strain WH7803) GN=grpE PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.648e-18
Identity = 48/155 (30.97%), Postives = 89/155 (57.42%), Query Frame = 3
Query:  432 EAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            E  S  D  + +++  +    +    +L R+ ++L  E    + +  R+ ADF+N RKR  +++  ++       +  +L +VD+FERAR Q+ P+ E+ + +  SYQG+YKQ V++++ +  A +  VG+ FDP +HEA+ RE S+   E ++I
Sbjct:   31 ETPSASDPGSAAEVSPQTGNNEARLEQLEREHTTLRDEHDVLRGQYMRIAADFDNFRKRQSRDQDDLKIQLTCSTLSEILPVVDNFERARQQLDPQGEEAQALHRSYQGLYKQLVDVLKQLGVAPMRVVGQEFDPTLHEAVLREPSDAHPEDVVI 185          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_BACP2 (Protein grpE OS=Bacillus pumilus (strain SAFR-032) GN=grpE PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.395e-17
Identity = 53/172 (30.81%), Postives = 90/172 (52.33%), Query Frame = 3
Query:  381 ADQKHLLNLKTLIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            +++K     +  +EA +EAV    E+          V Q+E++    K+  L   +   + K  R+QADFEN ++R+  E   V+      V+  LL  +D+FERA L I P+ E+ K +    Q +Y+Q VE +++     +  VGK FDP +H+A+ + E E F+  I++
Sbjct:    2 SEEKQTPEQEAEVEAQEEAVQADTEE----------VTQDEQSAFQEKIDELQQLLDEKENKILRVQADFENYKRRARTEVETVQKYRSQHVVSDLLPALDNFERA-LGIDPDNEQAKSLLEGMQMVYRQLVEALKNEGVEPIEAVGKEFDPNLHQAVMQVEDENFDSNIVV 162          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_ANOFW (Protein grpE OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=grpE PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.015e-16
Identity = 52/179 (29.05%), Postives = 93/179 (51.96%), Query Frame = 3
Query:  372 GSEADQKHLLNLKTLIEAYKEAVSN-GDEKAVSDIEARIFVVQNEKNELL---RKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            G E  +K        +E +++A S    E+ V  +E      Q EK+EL     K++ L A++   + +  RL ADF+N R+R   +  A        ++  LL ++D+FERA LQ++ E EK K +    + +Y+  +E ++     A+ +VGKPFDP VH+A+ + + + +    ++
Sbjct:    4 GGEKMEKEQRTYDETLEQHEDAQSEQAPEEQVEQVENEA-TQQEEKDELTVAYEKIAQLEAKLAETENRFLRLHADFDNYRRRVRLDMEAAEKYRAQSLVSDLLPILDNFERA-LQVQVEDEKAKLLLQGMEMVYRSLIEALKKEGVEAIESVGKPFDPHVHQAVMQVDDQNYEPNTVV 180          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_BACC1 (Protein grpE OS=Bacillus cereus (strain ATCC 10987) GN=grpE PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.489e-16
Identity = 50/163 (30.67%), Postives = 88/163 (53.99%), Query Frame = 3
Query:  414 LIEAYKEAVSNGD-EKAVSDIEARIFVVQNEKNELLR-KVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            ++E  KE V     E+AV+  ++   V +  +  LL+ KV  L A++T  + +  RLQADFEN ++R + ++ A        ++  +L  +D+FERA +Q++   E+ K +    + +Y+Q +E M      A+  VGK FDP  H+A+ + E  EF    ++
Sbjct:    8 VVEEVKEEVKEAQVEEAVTSEDSEESVEEKSEAALLQEKVDELQAKLTETEGRMLRLQADFENYKRRVQMDKQAAEKYRAQSLVSDILPALDNFERA-MQVEANDEQMKSLLQGMEMVYRQLLEAMTKEGVEAIEAVGKQFDPHEHQAVMQVEDSEFESNAVV 169          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_BACC7 (Protein grpE OS=Bacillus cereus (strain AH187) GN=grpE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.862e-16
Identity = 50/163 (30.67%), Postives = 88/163 (53.99%), Query Frame = 3
Query:  414 LIEAYKEAVSNGD-EKAVSDIEARIFVVQNEKNELLR-KVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            ++E  KE V     E+AV+  ++   V +  +  LL+ KV  L A++T  + +  RLQADFEN ++R + ++ A        ++  +L  +D+FERA +Q++   E+ K +    + +Y+Q +E M      A+  VGK FDP  H+A+ + E  EF    ++
Sbjct:    8 VVEEVKEEVKEAQVEEAVTSEDSEETVEEKSEAALLQEKVDELQAKLTETEGRMLRLQADFENYKRRVQMDKQAAEKYRAQSLVSDILPALDNFERA-MQVEATDEQMKSLLQGMEMVYRQLLEAMTKEGVEAIEAVGKQFDPHEHQAVMQVEDSEFESNAVV 169          
The following BLAST results are available for this feature:
BLAST of CK935731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
GRPE_SYNJB3.923e-2035.16Protein grpE OS=Synechococcus sp. GN=grpE PE=3 SV=... [more]
GRPE_PROM11.947e-1933.95Protein grpE OS=Prochlorococcus marinus (strain NA... [more]
GRPE_PROMT2.543e-1932.26Protein grpE OS=Prochlorococcus marinus (strain NA... [more]
GRPE_PROMA7.399e-1932.20Protein grpE OS=Prochlorococcus marinus GN=grpE PE... [more]
GRPE_TRIEI9.663e-1932.18Protein grpE OS=Trichodesmium erythraeum (strain I... [more]
GRPE_SYNPW1.648e-1830.97Protein grpE OS=Synechococcus sp. (strain WH7803) ... [more]
GRPE_BACP21.395e-1730.81Protein grpE OS=Bacillus pumilus (strain SAFR-032)... [more]
GRPE_ANOFW2.015e-1629.05Protein grpE OS=Anoxybacillus flavithermus (strain... [more]
GRPE_BACC14.489e-1630.67Protein grpE OS=Bacillus cereus (strain ATCC 10987... [more]
GRPE_BACC75.862e-1630.67Protein grpE OS=Bacillus cereus (strain AH187) GN=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_C09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935731 ID=CK935731; Name=CK935731; organism=Citrus sinensis; type=EST; length=897bp
GCCGGGGGGAAGGCAGCACCCAGCTGNNNAGCGAAAACCCTTTGGTGTGA
ATATTGAAAACATAATAAAAGCTAAATTGAGGAAGAGAAAACAGCTCTTG
ACTAAAAGAGTAGGCGTTAATAAATTATCCATCAGTCGAAGTCAATCGAA
TGGCTGTTGCGCTCTCAAACCACTCCTTCTTAGCTTCTCCGCGCCTTTCT
TCTTCTGCTTCTCTGTATAGACACAGAAAAACCCTAGCCCTTCGCTCTTT
CAATCGGAGACCTCCTCTCTTAAACCTAGAACTTCCCCTTCACAACAATA
CCGGGCCTGGCTTCAAGTCTTTCTTCGCTATAAATAACAAGGAGGGTTTC
CATGATGGTGAACAAGCCTCTGGAAGTGAAGCAGATCAGAAACATCTGTT
GAATCTGAAGACGTTGATTGAAGCCTACAAGGAGGCTGTGTCTAATGGAG
ATGAAAAGGCTGTATCTGATATTGAAGCTCGAATTTTTGTAGTACAAAAT
GAGAAGAATGAATTGTTACGCAAAGTTTCCTCACTATCAGCGGAGATAAC
CTCTGGGAAGGAGAAATGCACCCGCTTGCAAGCAGATTTTGAAAATTCTA
GGAAGAGATCAGAGAAGGAGAGGCTGGCTGTAAGGTCTGATGCCCAGGGC
GAAGTGATTGAGAGACTTTTGCTTTTGGTGGACAGTTTTGAGAGAGCGAG
ACTGCAAATCAAACCAGAGACAGAAAAGGAGAAAAAGATAGATACAAGTT
ATCAAGGTATATATAAGCAATTTGTGGAGATCATGAGGAGCATGCAAGCA
GCTGCAGTGCCAACTGTGGGAAAACCTTTTGATCCCGCGGTGCATGAGGC
CATTGCACGAGAGGAATCTGAAGAGTTCAATGAAGGGATTATTATTG
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