CK935731

Overview
NameCK935731
Unique NameCK935731
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_BACTR (Protein grpE OS=Bacillus thermoglucosidasius GN=grpE PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.706e-15
Identity = 51/163 (31.29%), Postives = 84/163 (51.53%), Query Frame = 3
Query:  420 EAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLR----KVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            E  K    NG + A  D        + E+NE L     K++ L A+I   + +  RL ADFEN R+R+ +E  A        ++  LL ++D+FERA L+IK E E+ K I    + +Y+  ++ ++     A+  VGKPFDP +H+A+ + E   +    ++
Sbjct:   40 EQEKVREENGRQDAQKDEIGDPEKAKEEQNEELAAANAKIAELEAKIKEMENRYLRLYADFENFRRRTRREMEAAEKYRAQSLVSDLLPVLDNFERA-LKIKAEDEQAKSILQGMEMVYRSVLDALKKEGVEAIEAVGKPFDPHLHQAVMQVEDSNYEPNTVV 201          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_BACHD (Protein grpE OS=Bacillus halodurans GN=grpE PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.706e-15
Identity = 51/169 (30.18%), Postives = 87/169 (51.48%), Query Frame = 3
Query:  402 NLKTLIEAYKEAVSNGDEKAVSDIEARIFVVQNEK-NELL---RKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            N KT +E  +E     DE    D         NE+ NEL    ++++ L  ++    ++  R+QAD++N R+R  +E+ A        +IE LL  +D+FERA L ++PE E+ K +    + +Y+Q  E ++      + T G+ FDP +H+A+ + E  EF    I+
Sbjct:    4 NEKTSVEETEEKAETEDEMLTEDPSNEDSDEANEEGNELSEEEKRIAELEGQVDELNQRLLRIQADYDNFRRRQREEKEAAAKYRAQSLIEELLPALDNFERA-LLVEPEQEETKTLLKGMEMVYRQVSEALKKEGLEVIETKGETFDPHLHQAVMQVEDAEFESNEIV 171          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_BACSU (Protein grpE OS=Bacillus subtilis GN=grpE PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 2.909e-15
Identity = 46/152 (30.26%), Postives = 83/152 (54.61%), Query Frame = 3
Query:  450 DEKAVSDIEARIFVVQNEKNE---LLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            +E+ + + +A     Q E NE   L  +++ L   +   + K  R+QADFEN ++RS  E  A +      ++  LL  +DSFERA LQ++ + E+ K +    + +++Q VE ++     A+  VG+ FDP +H+A+ + E E +   I++
Sbjct:   14 EEQEIIEEQAAADEQQEETNESELLQNQINELQGLLEEKENKLLRVQADFENYKRRSRLEMEASQKYRSQNIVTDLLPALDSFERA-LQVEADNEQTKSLLQGMEMVHRQLVEALKKEGVEAIEAVGQEFDPNLHQAVMQAEDENYGSNIVV 164          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_BACCN (Protein grpE OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=grpE PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.800e-15
Identity = 51/170 (30.00%), Postives = 89/170 (52.35%), Query Frame = 3
Query:  414 LIEAYKEA------VSNGDEKAVSDIEARIFVVQNEKNE---LLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            ++E  KEA      +    E++V++ EA    V  EK+E   L  KV  L A++T  + +  RLQADFEN ++R + ++ A        ++  +L  +D+FERA +Q++   E+ K +    + +Y+Q +E +       +  VGK FDP  H+A+ + E  EF    ++
Sbjct:    8 VVEETKEAQTEEATIEKNSEESVTE-EATEETVVEEKSEAALLQEKVDELQAKLTETEGRMLRLQADFENYKRRVQLDKQAAEKYRAQSLVSDILPALDNFERA-MQVEASDEQTKSLLQGMEMVYRQLLEALNKEGVEMIEAVGKQFDPHEHQAVMQVEDSEFESNAVV 175          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_BACA2 (Protein grpE OS=Bacillus amyloliquefaciens (strain FZB42) GN=grpE PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.217e-14
Identity = 48/158 (30.38%), Postives = 82/158 (51.90%), Query Frame = 3
Query:  423 AYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            A +E V+   E+A S  +      Q E   L  ++  L   +   + K  R+QADFEN ++RS  E  A +      V+  +L  +D+FERA LQ++ E+E+ K +    + + +Q ++ +      A+  VG+ FDP +H+A+ + E E F   I+I
Sbjct:   14 AEQEEVTEQAEQAASQEQHEETAGQEEA--LQHQIDELQGLLDEKENKLLRVQADFENYKRRSRLEMEAAQKYRSQNVVTEILPALDNFERA-LQVEAESEQTKSLLQGMEMVRRQLMDALEKEGVEAIEAVGQEFDPNLHQAVMQVEDENFGSNIVI 168          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_CLOPH (Protein grpE OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=grpE PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.201e-14
Identity = 55/180 (30.56%), Postives = 85/180 (47.22%), Query Frame = 3
Query:  354 DGEQASGSEADQKHLLNLKTLIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGII 893
            D +Q + SE       N     E Y+E  ++ D       E + F  + EK +   K      E+T   ++  R  A+FEN RKR+EKE+  +      ++IER+L ++D+FER    +  E EK+       + IYKQ V  + +     +   GK FDP  H A+   E EE+ E I+
Sbjct:   32 DIDQENQSEVVDDTTENEDASEEVYEEDTASEDGSK----EKKSFFKKKEKKD---KKDEKIDELT---DRLMRNMAEFENFRKRTEKEKTQMFEVGAKDIIERILPVIDNFERGLAAVSVE-EKDSAFVQGIEKIYKQLVTTLEAAGVKQIEAAGKEFDPDFHNAVMHAEDEEYGENIV 200          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_BACLD (Protein grpE OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=grpE PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.201e-14
Identity = 44/155 (28.39%), Postives = 83/155 (53.55%), Query Frame = 3
Query:  432 EAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            EA +   E+  ++ +A     Q E  E  +++  L   +   + K  R+QADFEN ++R+  +  A        +I  LL  +D+FERA LQI P+ E+ K +    + +++Q +E +++     +P+VG+ FDP +H+A+ + E E +    ++
Sbjct:   20 EAETAEAEQTAAEADAPAEETQTEMLE--KQLKELQERLEEKENKLLRVQADFENYKRRARLDLEAAEKYRSQRIISDLLPALDNFERA-LQIDPDNEQTKSLLQGMEMVHRQILEALKNEGVEQIPSVGEQFDPNMHQAVMQVEDEAYESNAVV 171          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_BACHK (Protein grpE OS=Bacillus thuringiensis subsp. konkukian GN=grpE PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.487e-14
Identity = 48/162 (29.63%), Postives = 86/162 (53.09%), Query Frame = 3
Query:  414 LIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLR-KVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            ++E  KEA     E+AV+   +   V +  +  LL+ KV  L A++T  + +  RLQADFEN ++R + ++ A        ++  +L  +D+FERA +Q++   E+ K +    + +++Q +E +       +  VGK FDP  H+AI + E  EF    ++
Sbjct:    8 VVEEVKEAQV---EEAVTPENSEETVEEKSEAALLQEKVDELQAKLTETEGRTLRLQADFENYKRRVQMDKQAAEKYRAQSLVSDILPALDNFERA-MQVEATDEQTKSLLQGMEMVHRQLLEALNKEGVEVIEAVGKQFDPNEHQAIMQVEDSEFESNAVV 165          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_BACCZ (Protein grpE OS=Bacillus cereus (strain ZK / E33L) GN=grpE PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.487e-14
Identity = 48/162 (29.63%), Postives = 86/162 (53.09%), Query Frame = 3
Query:  414 LIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLR-KVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            ++E  KEA     E+AV+   +   V +  +  LL+ KV  L A++T  + +  RLQADFEN ++R + ++ A        ++  +L  +D+FERA +Q++   E+ K +    + +++Q +E +       +  VGK FDP  H+AI + E  EF    ++
Sbjct:    8 VVEEVKEAQV---EEAVTPENSEETVEEKSEAALLQEKVDELQAKLTETEGRTLRLQADFENYKRRVQMDKQAAEKYRAQSLVSDILPALDNFERA-MQVEATDEQTKSLLQGMEMVHRQLLEALNKEGVEVIEAVGKQFDPNEHQAIMQVEDSEFESNAVV 165          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_BACC0 (Protein grpE OS=Bacillus cereus (strain AH820) GN=grpE PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.487e-14
Identity = 48/162 (29.63%), Postives = 86/162 (53.09%), Query Frame = 3
Query:  414 LIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLR-KVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            ++E  KEA     E+AV+   +   V +  +  LL+ KV  L A++T  + +  RLQADFEN ++R + ++ A        ++  +L  +D+FERA +Q++   E+ K +    + +++Q +E +       +  VGK FDP  H+AI + E  EF    ++
Sbjct:    8 VVEEVKEAQV---EEAVTPENSEETVEEKSEAALLQEKVDELQAKLTETEGRTLRLQADFENYKRRVQMDKQAAEKYRAQSLVSDILPALDNFERA-MQVEATDEQTKSLLQGMEMVHRQLLEALNKEGVEVIEAVGKQFDPNEHQAIMQVEDSEFESNAVV 165          
The following BLAST results are available for this feature:
BLAST of CK935731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
GRPE_BACTR1.706e-1531.29Protein grpE OS=Bacillus thermoglucosidasius GN=gr... [more]
GRPE_BACHD1.706e-1530.18Protein grpE OS=Bacillus halodurans GN=grpE PE=3 S... [more]
GRPE_BACSU2.909e-1530.26Protein grpE OS=Bacillus subtilis GN=grpE PE=1 SV=... [more]
GRPE_BACCN3.800e-1530.00Protein grpE OS=Bacillus cereus subsp. cytotoxis (... [more]
GRPE_BACA23.217e-1430.38Protein grpE OS=Bacillus amyloliquefaciens (strain... [more]
GRPE_CLOPH4.201e-1430.56Protein grpE OS=Clostridium phytofermentans (strai... [more]
GRPE_BACLD4.201e-1428.39Protein grpE OS=Bacillus licheniformis (strain DSM... [more]
GRPE_BACHK5.487e-1429.63Protein grpE OS=Bacillus thuringiensis subsp. konk... [more]
GRPE_BACCZ5.487e-1429.63Protein grpE OS=Bacillus cereus (strain ZK / E33L)... [more]
GRPE_BACC05.487e-1429.63Protein grpE OS=Bacillus cereus (strain AH820) GN=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_C09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935731 ID=CK935731; Name=CK935731; organism=Citrus sinensis; type=EST; length=897bp
GCCGGGGGGAAGGCAGCACCCAGCTGNNNAGCGAAAACCCTTTGGTGTGA
ATATTGAAAACATAATAAAAGCTAAATTGAGGAAGAGAAAACAGCTCTTG
ACTAAAAGAGTAGGCGTTAATAAATTATCCATCAGTCGAAGTCAATCGAA
TGGCTGTTGCGCTCTCAAACCACTCCTTCTTAGCTTCTCCGCGCCTTTCT
TCTTCTGCTTCTCTGTATAGACACAGAAAAACCCTAGCCCTTCGCTCTTT
CAATCGGAGACCTCCTCTCTTAAACCTAGAACTTCCCCTTCACAACAATA
CCGGGCCTGGCTTCAAGTCTTTCTTCGCTATAAATAACAAGGAGGGTTTC
CATGATGGTGAACAAGCCTCTGGAAGTGAAGCAGATCAGAAACATCTGTT
GAATCTGAAGACGTTGATTGAAGCCTACAAGGAGGCTGTGTCTAATGGAG
ATGAAAAGGCTGTATCTGATATTGAAGCTCGAATTTTTGTAGTACAAAAT
GAGAAGAATGAATTGTTACGCAAAGTTTCCTCACTATCAGCGGAGATAAC
CTCTGGGAAGGAGAAATGCACCCGCTTGCAAGCAGATTTTGAAAATTCTA
GGAAGAGATCAGAGAAGGAGAGGCTGGCTGTAAGGTCTGATGCCCAGGGC
GAAGTGATTGAGAGACTTTTGCTTTTGGTGGACAGTTTTGAGAGAGCGAG
ACTGCAAATCAAACCAGAGACAGAAAAGGAGAAAAAGATAGATACAAGTT
ATCAAGGTATATATAAGCAATTTGTGGAGATCATGAGGAGCATGCAAGCA
GCTGCAGTGCCAACTGTGGGAAAACCTTTTGATCCCGCGGTGCATGAGGC
CATTGCACGAGAGGAATCTGAAGAGTTCAATGAAGGGATTATTATTG
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