CK935731

Overview
NameCK935731
Unique NameCK935731
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_STAAT (Protein grpE OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=grpE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.136e-12
Identity = 43/187 (22.99%), Postives = 93/187 (49.73%), Query Frame = 3
Query:  333 NNKEGFHDGEQASGSEADQKHLLNLKTLIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGII 893
            N  E      +++  E + K   N+   +E  +E+  +  ++A+ +      + + +  +  +K++ L       +EK  RL A+FEN ++R +KE    ++     V+  +L  +D+ ERA LQI+ + E  K +    Q +++  +  ++      + T G+ FDP +H+A+ ++++ +F  G I
Sbjct:    3 NKDESVEKNTESTVEETNVKQ--NIDDSVEQAEESKGHLQDEAIEETSDENVIEEIDPKD--QKINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEI 184          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_STAAS (Protein grpE OS=Staphylococcus aureus (strain MSSA476) GN=grpE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.136e-12
Identity = 43/187 (22.99%), Postives = 93/187 (49.73%), Query Frame = 3
Query:  333 NNKEGFHDGEQASGSEADQKHLLNLKTLIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGII 893
            N  E      +++  E + K   N+   +E  +E+  +  ++A+ +      + + +  +  +K++ L       +EK  RL A+FEN ++R +KE    ++     V+  +L  +D+ ERA LQI+ + E  K +    Q +++  +  ++      + T G+ FDP +H+A+ ++++ +F  G I
Sbjct:    3 NKDESVEKNTESTVEETNVKQ--NIDDSVEQAEESKGHLQDEAIEETSDENVIEEIDPKD--QKINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEI 184          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_STAAR (Protein grpE OS=Staphylococcus aureus (strain MRSA252) GN=grpE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.136e-12
Identity = 43/187 (22.99%), Postives = 93/187 (49.73%), Query Frame = 3
Query:  333 NNKEGFHDGEQASGSEADQKHLLNLKTLIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGII 893
            N  E      +++  E + K   N+   +E  +E+  +  ++A+ +      + + +  +  +K++ L       +EK  RL A+FEN ++R +KE    ++     V+  +L  +D+ ERA LQI+ + E  K +    Q +++  +  ++      + T G+ FDP +H+A+ ++++ +F  G I
Sbjct:    3 NKDESVEKNTESTVEETNVKQ--NIDDSVEQAEESKGHLQDEAIEETSDENVIEEIDPKD--QKINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEI 184          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_STAAE (Protein grpE OS=Staphylococcus aureus (strain Newman) GN=grpE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.136e-12
Identity = 43/187 (22.99%), Postives = 93/187 (49.73%), Query Frame = 3
Query:  333 NNKEGFHDGEQASGSEADQKHLLNLKTLIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGII 893
            N  E      +++  E + K   N+   +E  +E+  +  ++A+ +      + + +  +  +K++ L       +EK  RL A+FEN ++R +KE    ++     V+  +L  +D+ ERA LQI+ + E  K +    Q +++  +  ++      + T G+ FDP +H+A+ ++++ +F  G I
Sbjct:    3 NKDESVEKNTESTVEETNVKQ--NIDDSVEQAEESKGHLQDEAIEETSDENVIEEIDPKD--QKINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEI 184          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_STAA8 (Protein grpE OS=Staphylococcus aureus (strain NCTC 8325) GN=grpE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.136e-12
Identity = 43/187 (22.99%), Postives = 93/187 (49.73%), Query Frame = 3
Query:  333 NNKEGFHDGEQASGSEADQKHLLNLKTLIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGII 893
            N  E      +++  E + K   N+   +E  +E+  +  ++A+ +      + + +  +  +K++ L       +EK  RL A+FEN ++R +KE    ++     V+  +L  +D+ ERA LQI+ + E  K +    Q +++  +  ++      + T G+ FDP +H+A+ ++++ +F  G I
Sbjct:    3 NKDESVEKNTESTVEETNVKQ--NIDDSVEQAEESKGHLQDEAIEETSDENVIEEIDPKD--QKINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEI 184          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_STAA3 (Protein grpE OS=Staphylococcus aureus (strain USA300) GN=grpE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.136e-12
Identity = 43/187 (22.99%), Postives = 93/187 (49.73%), Query Frame = 3
Query:  333 NNKEGFHDGEQASGSEADQKHLLNLKTLIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGII 893
            N  E      +++  E + K   N+   +E  +E+  +  ++A+ +      + + +  +  +K++ L       +EK  RL A+FEN ++R +KE    ++     V+  +L  +D+ ERA LQI+ + E  K +    Q +++  +  ++      + T G+ FDP +H+A+ ++++ +F  G I
Sbjct:    3 NKDESVEKNTESTVEETNVKQ--NIDDSVEQAEESKGHLQDEAIEETSDENVIEEIDPKD--QKINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEI 184          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_GEOTN (Protein grpE OS=Geobacillus thermodenitrificans (strain NG80-2) GN=grpE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.136e-12
Identity = 37/125 (29.60%), Postives = 69/125 (55.20%), Query Frame = 3
Query:  522 KVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            +V+ L  ++   +++  RL ADFEN R+R+ +E  A        +   LL ++D+FERA L+I+ E E+ K I    + +Y+  ++ +R      +  VGKPFDP +H+A+ + +   +    ++
Sbjct:   74 QVAELEEKLAEMEKRYLRLYADFENFRRRARQEMEAAEKYRAQSLASDLLPVLDNFERA-LKIETENEQAKSILQGVEMVYRSLLDALRKEGVEVIEAVGKPFDPHLHQAVMQTDEGGYEPNTVV 197          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_BACST (Protein grpE OS=Bacillus stearothermophilus GN=grpE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.136e-12
Identity = 48/179 (26.82%), Postives = 85/179 (47.49%), Query Frame = 3
Query:  360 EQASGSEADQKHLLNLKTLIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGIII 896
            E+  G+E  +++  NL+      ++       KA  +    +    N KN   R      +E      +  RL ADFEN R+R+ +E  A        ++  LL  +D+FERA L+I+ E E+ K I    + +Y+  ++ ++     A+  VGKPFDP +H+A+ + E   +    ++
Sbjct:   28 EERGGNEPQEENAENLQQENTQAQQEALEEQPKAEQEQNDEL-AAANAKNCRTR------SEDKRNGNRYLRLYADFENFRRRTRQEMEAAEKYRAQSLVSDLLPALDNFERA-LKIETENEQAKSILQGMEMVYRSVLDALKKEGVEAIEAVGKPFDPHLHQAVMQVEDSNYEPNTVV 198          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_STAAU (Protein grpE OS=Staphylococcus aureus GN=grpE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.707e-12
Identity = 43/187 (22.99%), Postives = 93/187 (49.73%), Query Frame = 3
Query:  333 NNKEGFHDGEQASGSEADQKHLLNLKTLIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGII 893
            N  E      +++  E + K   N+   +E  +E+  +  ++A+ +      + + +  +  +K++ L       +EK  RL A+FEN ++R +KE    ++     V+  +L  +D+ ERA LQI+ + E  K +    Q +++  +  ++      + T G+ FDP +H+A+ ++++ +F  G I
Sbjct:    3 NKDESVEKNTESTVEETNIKQ--NIDDSVEQAEESKGHLQDEAIEETSDENVIEEIDPKD--QKINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEI 184          
BLAST of CK935731 vs. ExPASy Swiss-Prot
Match: GRPE_STAAN (Protein grpE OS=Staphylococcus aureus (strain N315) GN=grpE PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.707e-12
Identity = 43/187 (22.99%), Postives = 93/187 (49.73%), Query Frame = 3
Query:  333 NNKEGFHDGEQASGSEADQKHLLNLKTLIEAYKEAVSNGDEKAVSDIEARIFVVQNEKNELLRKVSSLSAEITSGKEKCTRLQADFENSRKRSEKERLAVRSDAQGEVIERLLLLVDSFERARLQIKPETEKEKKIDTSYQGIYKQFVEIMRSMQAAAVPTVGKPFDPAVHEAIAREESEEFNEGII 893
            N  E      +++  E + K   N+   +E  +E+  +  ++A+ +      + + +  +  +K++ L       +EK  RL A+FEN ++R +KE    ++     V+  +L  +D+ ERA LQI+ + E  K +    Q +++  +  ++      + T G+ FDP +H+A+ ++++ +F  G I
Sbjct:    3 NKDESVEKNTESTVEETNIKQ--NIDDSVEQAEESKGHLQDEAIEETSDENVIEEIDPKD--QKINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEI 184          
The following BLAST results are available for this feature:
BLAST of CK935731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
GRPE_STAAT5.136e-1222.99Protein grpE OS=Staphylococcus aureus (strain USA3... [more]
GRPE_STAAS5.136e-1222.99Protein grpE OS=Staphylococcus aureus (strain MSSA... [more]
GRPE_STAAR5.136e-1222.99Protein grpE OS=Staphylococcus aureus (strain MRSA... [more]
GRPE_STAAE5.136e-1222.99Protein grpE OS=Staphylococcus aureus (strain Newm... [more]
GRPE_STAA85.136e-1222.99Protein grpE OS=Staphylococcus aureus (strain NCTC... [more]
GRPE_STAA35.136e-1222.99Protein grpE OS=Staphylococcus aureus (strain USA3... [more]
GRPE_GEOTN5.136e-1229.60Protein grpE OS=Geobacillus thermodenitrificans (s... [more]
GRPE_BACST5.136e-1226.82Protein grpE OS=Bacillus stearothermophilus GN=grp... [more]
GRPE_STAAU6.707e-1222.99Protein grpE OS=Staphylococcus aureus GN=grpE PE=3... [more]
GRPE_STAAN6.707e-1222.99Protein grpE OS=Staphylococcus aureus (strain N315... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_C09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935731 ID=CK935731; Name=CK935731; organism=Citrus sinensis; type=EST; length=897bp
GCCGGGGGGAAGGCAGCACCCAGCTGNNNAGCGAAAACCCTTTGGTGTGA
ATATTGAAAACATAATAAAAGCTAAATTGAGGAAGAGAAAACAGCTCTTG
ACTAAAAGAGTAGGCGTTAATAAATTATCCATCAGTCGAAGTCAATCGAA
TGGCTGTTGCGCTCTCAAACCACTCCTTCTTAGCTTCTCCGCGCCTTTCT
TCTTCTGCTTCTCTGTATAGACACAGAAAAACCCTAGCCCTTCGCTCTTT
CAATCGGAGACCTCCTCTCTTAAACCTAGAACTTCCCCTTCACAACAATA
CCGGGCCTGGCTTCAAGTCTTTCTTCGCTATAAATAACAAGGAGGGTTTC
CATGATGGTGAACAAGCCTCTGGAAGTGAAGCAGATCAGAAACATCTGTT
GAATCTGAAGACGTTGATTGAAGCCTACAAGGAGGCTGTGTCTAATGGAG
ATGAAAAGGCTGTATCTGATATTGAAGCTCGAATTTTTGTAGTACAAAAT
GAGAAGAATGAATTGTTACGCAAAGTTTCCTCACTATCAGCGGAGATAAC
CTCTGGGAAGGAGAAATGCACCCGCTTGCAAGCAGATTTTGAAAATTCTA
GGAAGAGATCAGAGAAGGAGAGGCTGGCTGTAAGGTCTGATGCCCAGGGC
GAAGTGATTGAGAGACTTTTGCTTTTGGTGGACAGTTTTGAGAGAGCGAG
ACTGCAAATCAAACCAGAGACAGAAAAGGAGAAAAAGATAGATACAAGTT
ATCAAGGTATATATAAGCAATTTGTGGAGATCATGAGGAGCATGCAAGCA
GCTGCAGTGCCAACTGTGGGAAAACCTTTTGATCCCGCGGTGCATGAGGC
CATTGCACGAGAGGAATCTGAAGAGTTCAATGAAGGGATTATTATTG
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