CK935735
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935735 vs. ExPASy Swiss-Prot
Match: ARP5_DROPS (Actin-related protein 5 OS=Drosophila pseudoobscura pseudoobscura GN=Arp5 PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13 Identity = 55/243 (22.63%), Postives = 114/243 (46.91%), Query Frame = 3 Query: 153 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHT-----------GVMVGMGQK---DAYVGDEAQSKRGILT-LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSL--YASGR---TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQEL 812 LV DNG+ + G+ P F +++ +PR G + + + VG++ + + LK P E I++NW+ E+I+ + F ++ E+ +P++LTEA NP R+ M++++FE + +PA+ I A+ S Y + R + +++ G +H +P+ G + RL++ G + L+ ++ + + + + + ++A+DY +EL Sbjct: 8 LVIDNGSYECRVGWNNTKEPALRFRNVLTKPRKDRKKEAIPDTTDGAPTPVAAEVPAEIQVGNDITNIEAVRAHLKSPFERNIITNWNHQEQIFDYIF-TKMGFEGEQSIANPIVLTEALANPNFCRQNMSELLFECYGIPAVSYGIDALYSWEHYQNRRKKVSDALIISLGYSTTHVIPVLNGKLQLQHVRRLNVGGYHIITYLLCLMQMKYPVHLNAISISRMEKLVHEHCHIAVDYREEL 249
BLAST of CK935735 vs. ExPASy Swiss-Prot
Match: ARP8_ORYSJ (Actin-related protein 8 OS=Oryza sativa subsp. japonica GN=ARP8 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.366e-12 Identity = 53/179 (29.61%), Postives = 88/179 (49.16%), Query Frame = 3 Query: 396 TFYNELRVAPEEHPVLLT----------EAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFR 899 T Y ++V P P+++ A + K R+ + ++F+ NVPA+ QAVL+LYA+ RT+GIV++ G + VPI++G + + + LT L +++ +R F + VR +KEKL YVA DYE A+ + + E+ T+ ERF+ Sbjct: 188 TIYTRMQVKPSTQPIIVVLPLCHSDDTESARASRKQYRDTLYSVLFD-MNVPAVCSVDQAVLALYAAKRTSGIVVNIGFNATSIVPIFQGRVMHEIGVETVGQGALKLTGFLKELMQQRNITFESL---YTVRTIKEKLCYVAADYE-----AEKRKDTQASCEVDGEGWFTLSEERFK 357
BLAST of CK935735 vs. ExPASy Swiss-Prot
Match: ARP8_ORYSI (Actin-related protein 8 OS=Oryza sativa subsp. indica GN=ARP8 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.366e-12 Identity = 53/179 (29.61%), Postives = 88/179 (49.16%), Query Frame = 3 Query: 396 TFYNELRVAPEEHPVLLT----------EAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFR 899 T Y ++V P P+++ A + K R+ + ++F+ NVPA+ QAVL+LYA+ RT+GIV++ G + VPI++G + + + LT L +++ +R F + VR +KEKL YVA DYE A+ + + E+ T+ ERF+ Sbjct: 188 TIYTRMQVKPSTQPIIVVLPLCHSDDTESARASRKQYRDTLYSVLFD-MNVPAVCSVDQAVLALYAAKRTSGIVVNIGFNATSIVPIFQGRVMHEIGVETVGQGALKLTGFLKELMQQRNITFESL---YTVRTIKEKLCYVAADYE-----AEKRKDTQASCEVDGEGWFTLSEERFK 357
BLAST of CK935735 vs. ExPASy Swiss-Prot
Match: ACT4_LYTPI (Actin, cytoskeletal 4 (Fragment) OS=Lytechinus pictus PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.856e-12 Identity = 33/43 (76.74%), Postives = 39/43 (90.70%), Query Frame = 3 Query: 771 EKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFR 899 EKL YVALD+EQE++TA SSSS+EK+YELPDGQ+IT G ERFR Sbjct: 1 EKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITTGNERFR 43
BLAST of CK935735 vs. ExPASy Swiss-Prot
Match: ARP6_DEBHA (Actin-like protein ARP6 OS=Debaryomyces hansenii GN=ARP6 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.511e-11 Identity = 68/260 (26.15%), Postives = 107/260 (41.15%), Query Frame = 3 Query: 147 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDE---AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFY----NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN-------VPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIG 884 Q V DNG+ +KAGF+ DAP +H + YVG+E + + K P +HG + +W+ + +W +TF N+ A H + LTE P QI+FE + PA V + S + +V+DSG + VPI + +L + G L L +I++ R Y E ++ +KEK ++A D+E+ L K + LPD + T G Sbjct: 4 QYFVIDNGSYNIKAGFSNQDAP----------IKHQNALSKARDGLIYVGNEYLVQTNNYSGMIFKRPYDHGHLISWETEKAVWDYTFNKASPNQELDASITH-LTLTETPFQLPQLSMNTDQIVFEEYGFNEYYRCAPASLVPWSNLGSSESKNNDFTLVVDSGYSGTWIVPIIYQNVYWKGVKKLPIGGAALNGLLREIISFRHY--DIADEPVLINTIKEKTCFMATDFEKSLANRK---KYRCEFILPDFKTTTTG 247
BLAST of CK935735 vs. ExPASy Swiss-Prot
Match: ARP9_SCHPO (SWI/SNF and RSC complexes subunit arp9 OS=Schizosaccharomyces pombe GN=arp9 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.973e-11 Identity = 59/203 (29.06%), Postives = 92/203 (45.32%), Query Frame = 3 Query: 339 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKE------KLAYVALDYEQELETAK-------SSSSVEKNYELPD-GQIITIGAER 893 PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ FE VP +A + ++ LYA G G+V+D G + PI +G + A +L L GR +T L +L E ++ + D+ E K + +A E +TAK S+++VE+ D G+II G R Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGRYMTQHLQNLLRESLPTLKSSGQYVSKEDITELFAEQVKCSEIAQVVRDEQDTAKDPVKALTSTNNVEEEDPAEDIGKIIASGQTR 314
BLAST of CK935735 vs. ExPASy Swiss-Prot
Match: ARP8_ARATH (Actin-related protein 8 OS=Arabidopsis thaliana GN=ARP8 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.973e-11 Identity = 56/179 (31.28%), Postives = 88/179 (49.16%), Query Frame = 3 Query: 396 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFR 899 T + ++V P P++++ PL + KA+R ++ +F NVPA+ QAVL+LYA+ RT+GIV++ G V +PI G + + + LT L + + E F + VR +KEKL YVALDY+ EL S + + E+ T+ ERF+ Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNISFQSL---YTVRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQ 351 The following BLAST results are available for this feature:
BLAST of CK935735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 487
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935735 ID=CK935735; Name=CK935735; organism=Citrus sinensis; type=EST; length=903bpback to top |