CK935744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: SCMC2_RAT (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Rattus norvegicus GN=Slc25a25 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18 Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 2 Query: 380 KSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNG--TIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760 + LVAGG AGAVSRT APL+RLK+L+QV H+ + N I G + R G + L++GNG N +I P SA+KF +YEQ + + G++ L RL AG+ AG IA S+ YPM++++ Sbjct: 188 RHLVAGGGAGAVSRTCTAPLDRLKVLMQV---HASRSNNMCIIGGFTQMIREGGAKSLWRGNGINVLKIAPESAIKFMAYEQMKRLV--------GSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLK 305
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: SCMC2_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Mus musculus GN=Slc25a25 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.843e-18 Identity = 54/129 (41.86%), Postives = 78/129 (60.47%), Query Frame = 2 Query: 380 KSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNG--TIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760 + LVAGG AGAVSRT APL+RLK+L+QV H+ + N + G + R G + L++GNG N +I P SA+KF +YEQ + + G++ L RL AG+ AG IA S+ YPM++++ Sbjct: 188 RHLVAGGGAGAVSRTCTAPLDRLKVLMQV---HASRSNNMCIVGGFTQMIREGGAKSLWRGNGINVLKIAPESAIKFMAYEQMKRLV--------GSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLK 305
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: S2542_RAT (Solute carrier family 25 member 42 OS=Rattus norvegicus GN=Slc25a42 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.843e-18 Identity = 53/152 (34.87%), Postives = 84/152 (55.26%), Query Frame = 2 Query: 305 VNLAEEAKLAGEGVKAPSYAVLSICKSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760 V L E+A+ G + + SL++G +AGA+++TAVAPL+R KI+ QV + + L + + EGF L++GN R++P +A++F ++E+ + + H+ G L P RL AGA AG A S TYP+D+VR Sbjct: 10 VRLGEDAEAVLAGAVSTKANHRQVLSSLLSGALAGALAKTAVAPLDRTKIIFQVSSKR-FSAKEAFRLLYFTYLNEGFLSLWRGNSATMVRVIPYAAIQFSAHEEYKR----ILGHYYGFRGEALPPWPRLLAGALAGTTAASLTYPLDLVR 156
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: S2542_DANRE (Solute carrier family 25 member 42 OS=Danio rerio GN=slc25a42 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.843e-18 Identity = 66/167 (39.52%), Postives = 94/167 (56.29%), Query Frame = 2 Query: 272 VKTSESAVSKIVNLAEEAKLAGEGVKAPSYAVLSICKSLVAGGVAGAVSRTAVAPLERLKILLQV-QNPHSIKYNGTIQGLKYIWRT---EGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760 V+ + A+++ L A EG K S+ SLV+G AGAV++TAVAPL+R KI+ QV N S K + + I+RT +GF L++GN R++P +A++F ++EQ KGIL Y G + L P+ RL AG+ AG A TYP+DMVR Sbjct: 5 VQERQGALAQGEVLPRPAASQSEGFKQGR----SVLNSLVSGAFAGAVAKTAVAPLDRTKIIFQVSSNRFSAK-----EAYRLIYRTYLKDGFFSLWRGNSATMVRVIPYAAIQFCAHEQ-YKGILGKYY---GFQGKALPPVPRLLAGSLAGTTAAIITYPLDMVR 158
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: S2542_MOUSE (Solute carrier family 25 member 42 OS=Mus musculus GN=Slc25a42 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.155e-17 Identity = 53/152 (34.87%), Postives = 84/152 (55.26%), Query Frame = 2 Query: 305 VNLAEEAKLAGEGVKAPSYAVLSICKSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760 V L E+A+ G + + SL++G +AGA+++TAVAPL+R KI+ QV + + L + + EGF L++GN R++P +A++F ++E+ + + H+ G L P RL AGA AG A S TYP+D+VR Sbjct: 10 VRLREDAEAVLAGAVSSKRDHRQVLSSLLSGALAGALAKTAVAPLDRTKIIFQVSSKR-FSAKEAFRLLYFTYLNEGFLSLWRGNSATMVRVIPYAAIQFSAHEEYKR----ILGHYYGFRGEALPPWPRLLAGALAGTTAASLTYPLDLVR 156
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: SCM2A_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-A OS=Danio rerio GN=slc25a25a PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.710e-17 Identity = 51/127 (40.16%), Postives = 74/127 (58.27%), Query Frame = 2 Query: 380 KSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760 + LV+GG AGAVSRT APL+RLK+L+QV K + GL + + G R L++GNG N +I P +A+KF +YEQ + + G+ L R AG+ AG+IA S YPM++++ Sbjct: 188 RHLVSGGGAGAVSRTCTAPLDRLKVLMQVHGCQG-KSMCLMSGLTQMIKEGGVRSLWRGNGINVIKIAPETALKFMAYEQIKRVM--------GSSQETLGISERFVAGSLAGVIAQSTIYPMEVLK 305 HSP 2 Score: 21.557 bits (44), Expect = 1.710e-17 Identity = 7/19 (36.84%), Postives = 13/19 (68.42%), Query Frame = 3 Query: 312 WRKRPSLQEKASKPQAMLF 368 W+K P+LQ + P+ +L+ Sbjct: 139 WKKYPTLQPAENIPEIILY 157
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: SCMC3_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Homo sapiens GN=SLC25A23 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.573e-17 Identity = 54/129 (41.86%), Postives = 74/129 (57.36%), Query Frame = 2 Query: 380 KSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYN--GTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760 K LVAG VAGAVSRT APL+RLK+ +QV H+ K N + GL+ + G R L++GNG N +I P SA+KF +YEQ + IL + L R AG+ AG A + YPM++++ Sbjct: 187 KQLVAGAVAGAVSRTGTAPLDRLKVFMQV---HASKTNRLNILGGLRSMVLEGGIRSLWRGNGINVLKIAPESAIKFMAYEQIKRAIL--------GQQETLHVQERFVAGSLAGATAQTIIYPMEVLK 304
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: SCMC1_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Danio rerio GN=slc25a24 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.573e-17 Identity = 51/129 (39.53%), Postives = 74/129 (57.36%), Query Frame = 2 Query: 380 KSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYN--GTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760 K L AGGVAGAVSRT APL+R+K+ +QV HS K N + G K + + G L++GNG N +I P +A+KF +YEQ Y+ + ++ R AG+ AG A +A YPM++++ Sbjct: 197 KQLAAGGVAGAVSRTGTAPLDRMKVFMQV---HSSKTNKISLVNGFKQMIKEGGVASLWRGNGVNVIKIAPETAIKFMAYEQ--------YKKLLSKDGGKVQSHERFMAGSLAGATAQTAIYPMEVMK 314
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: CMC3_CAEEL (Probable calcium-binding mitochondrial carrier F17E5.2 OS=Caenorhabditis elegans GN=F17E5.2 PE=2 SV=4) HSP 1 Score: 89.3521 bits (220), Expect = 2.573e-17 Identity = 50/127 (39.37%), Postives = 78/127 (61.42%), Query Frame = 2 Query: 380 KSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760 + LVAGGVAGA+SRT AP +R+K+ LQV + + K G + + + G + ++GNG N +I P SA+KF Y+Q + + Q + G AEL+ + RL AG+ AG I+ +A YPM++++ Sbjct: 246 RHLVAGGVAGAMSRTCTAPFDRIKVYLQVNSTKTNKL-GVVSCVHLLHAEGGIKSFWRGNGINVIKIAPESAMKFMCYDQIKRWM----QEYKGG--AELSTIERLLAGSSAGAISQTAIYPMEVMK 365
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: SCMC1_RABIT (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.360e-17 Identity = 49/127 (38.58%), Postives = 76/127 (59.84%), Query Frame = 2 Query: 380 KSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760 + L+AGG+AGAVSRT+ APL+RLK+++QV S+ G G + + + G R L++GNGTN +I P +AVKF+ YEQ Y+ E ++ R +G+ AG A + YPM++++ Sbjct: 196 RQLLAGGIAGAVSRTSTAPLDRLKVMMQVHGSKSMNIFG---GFRQMIKEGGVRSLWRGNGTNVIKIAPETAVKFWVYEQ--------YKKLLTEEGQKIGTFERFISGSMAGATAQTFIYPMEVMK 311 The following BLAST results are available for this feature:
BLAST of CK935744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935744 ID=CK935744; Name=CK935744; organism=Citrus sinensis; type=EST; length=796bpback to top |