CK935744

Overview
NameCK935744
Unique NameCK935744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: GDC_MOUSE (Graves disease carrier protein homolog OS=Mus musculus GN=Slc25a16 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.360e-17
Identity = 49/127 (38.58%), Postives = 76/127 (59.84%), Query Frame = 2
Query:  380 KSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            +S +AGG+AG  ++T VAPL+R+K+LLQ  N H  K+ G +  L+ + + EG+ GL+KGNG    RI P  A++F ++E         Y+     +      + RL AG+ AG+ A+  TYP+D+VR
Sbjct:   38 RSFLAGGIAGCCAKTTVAPLDRVKVLLQAHNRH-YKHLGVLSTLRAVPQKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEH--------YKTFITTKLGVSGHVHRLMAGSMAGMTAVICTYPLDVVR 155          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: GDC_BOVIN (Graves disease carrier protein OS=Bos taurus GN=SLC25A16 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.360e-17
Identity = 50/127 (39.37%), Postives = 78/127 (61.42%), Query Frame = 2
Query:  380 KSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            +S +AGG+AG  ++T VAPL+R+K+LLQ  N H  ++ G    L+ + + EG+ GL+KGNG    RI P  A++F ++E   K ++      +G+       + RL AG+ AG+ A+  TYP+DMVR
Sbjct:   36 RSFLAGGIAGCCAKTTVAPLDRVKVLLQAHN-HHYRHLGVFSTLRAVPKKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEH-YKTLITTKLGVSGH-------VHRLMAGSMAGMTAVICTYPLDMVR 153          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: S2542_HUMAN (Solute carrier family 25 member 42 OS=Homo sapiens GN=SLC25A42 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 9.777e-17
Identity = 53/129 (41.09%), Postives = 76/129 (58.91%), Query Frame = 2
Query:  374 ICKSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            +  SL++G +AGA+++TAVAPL+R KI+ QV +          + L Y +  EGF  L++GN     R+VP +A++F ++E+  K IL  Y    G     L P  RL AGA AG  A S TYP+D+VR
Sbjct:   33 VLSSLLSGALAGALAKTAVAPLDRTKIIFQVSSKR-FSAKEAFRVLYYTYLNEGFLSLWRGNSATMVRVVPYAAIQFSAHEE-YKRILGSYYGFRGE---ALPPWPRLFAGALAGTTAASLTYPLDLVR 156          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: TAAC_ARATH (Thylakoid ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana GN=TAAC PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.668e-16
Identity = 59/169 (34.91%), Postives = 94/169 (55.62%), Query Frame = 2
Query:  287 SAVSKIVNLAEE--AKLAGEGVKAPSYAVLSICKS----LVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYN-----GTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            ++VS ++   E+  A  + + +K P  A+LSI         AG  AGA +++  APL+R+K+L+Q     + + +     G I+ +  I + EG +G +KGN     RIVP SAV+ F+YE         Y+     +D +L+ L RLGAGACAG+ +   TYP+D++R
Sbjct:   81 ASVSVVIPKEEDEFAPTSAQLLKNP-IALLSIVPKDAALFFAGAFAGAAAKSVTAPLDRIKLLMQTHGVRAGQQSAKKAIGFIEAITLIGKEEGIKGYWKGNLPQVIRIVPYSAVQLFAYE--------TYKKLFRGKDGQLSVLGRLGAGACAGMTSTLITYPLDVLR 240          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: SCMC3_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Mus musculus GN=Slc25a23 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.178e-16
Identity = 51/127 (40.16%), Postives = 72/127 (56.69%), Query Frame = 2
Query:  380 KSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            K LVAG VAGAVSRT  APL+RLK+ +QV    S + N  + GL+ + +  G   L++GNG N  +I P SA+KF +YEQ  + I          +   L    R  AG+ AG  A +  YPM++++
Sbjct:  186 KQLVAGAVAGAVSRTGTAPLDRLKVFMQVHASKSNRLN-ILGGLRNMIQEGGVLSLWRGNGINVLKIAPESAIKFMAYEQIKRAI--------RGQQETLHVQERFVAGSLAGATAQTIIYPMEVLK 303          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: MCFA_DICDI (Mitochondrial substrate carrier family protein A OS=Dictyostelium discoideum GN=mcfA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.715e-16
Identity = 46/125 (36.80%), Postives = 73/125 (58.40%), Query Frame = 2
Query:  392 AGGVAGAVSRTAVAPLERLKILLQVQN--PHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            +G +AG VSRT  APLER+KIL QV+       KYN  I   K I + EG  GLF+GN  N  +  P SA++F+SY          ++      D  ++ + R+ AGA +G+++++ T+P+D+++
Sbjct:   51 SGLIAGIVSRTLTAPLERIKILNQVEVILKDGTKYNRIIPAFKVIIKEEGIAGLFRGNFVNIIKAGPQSAIRFYSYG--------AFKRMASEPDGSISVINRMWAGASSGVVSVALTHPLDVIK 167          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: MCFV_DICDI (Mitochondrial substrate carrier family protein V OS=Dictyostelium discoideum GN=mcfV PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.276e-16
Identity = 51/145 (35.17%), Postives = 76/145 (52.41%), Query Frame = 2
Query:  386 LVAGGVAGAVSRTAVAPLERLKILLQVQNPH---SIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAE-----------------LTPLLRLGAGACAGIIAMSATYPMDMVR 760
            LV+G +AGA+SR+A A  ERL I+ QVQ      S  Y G I  +K + + EGF+ ++KGNG N  ++ PNS ++F +YE   K  L    +H  +   E                 +T    + +GA AG+ +   TYP+D+VR
Sbjct:  136 LVSGSIAGAISRSATAGFERLTIIQQVQGMSQNLSQGYVGCIAAMKEMVKREGFKSIWKGNGANIVKVSPNSGIRFLTYEFCKKHFLDNSSNHPSSSSIENGIDGNGVGCGSGSEMKMTVPQTMFSGAMAGLTSTFFTYPLDVVR 280          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: GDC_RAT (Graves disease carrier protein (Fragment) OS=Rattus norvegicus GN=Slc25a16 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.081e-15
Identity = 49/130 (37.69%), Postives = 77/130 (59.23%), Query Frame = 2
Query:  380 KSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSA---TYPMDMVR 760
            +S +AG +AG  ++T VAPL+R+K+LLQ  N H  K+ G +  L+ + + EG+ GL+KGNG    RI P  A++F ++E         Y+     +      + RL AG+ AG ++M+A   TYP+D+VR
Sbjct:   38 RSFLAGSIAGCCAKTTVAPLDRVKVLLQAHN-HHYKHLGVLSPLRAVPQKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEH--------YKTFITTKLGVSGHVHRLMAGSMAGKMSMTAVICTYPLDVVR 158          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: EAAC_ARATH (Probable envelope ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana GN=EAAC PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.006e-15
Identity = 46/128 (35.94%), Postives = 74/128 (57.81%), Query Frame = 2
Query:  392 AGGVAGAVSRTAVAPLERLKILLQVQN-----PHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            AG +AGA ++T  APL+R+K+L+Q          + K  G I+ +  I + EG +G +KGN     R++P SAV+  +YE         Y++    +D +L+ + RL AGACAG+ +   TYP+D++R
Sbjct:   93 AGALAGAAAKTVTAPLDRIKLLMQTHGIRLGQQSAKKAIGFIEAITLIAKEEGVKGYWKGNLPQVIRVLPYSAVQLLAYES--------YKNLFKGKDDQLSVIGRLAAGACAGMTSTLLTYPLDVLR 212          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: BT1_MAIZE (Protein brittle-1, chloroplastic/amyloplastic OS=Zea mays GN=BT1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.151e-15
Identity = 47/125 (37.60%), Postives = 72/125 (57.60%), Query Frame = 2
Query:  386 LVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            LV+G +AGAVSRT VAPLE ++  L V    SI  +      ++I + EG+ GLF+GN  N  R+ P+ A++ F+Y+ A K     +    G+E  ++     L AGA AG  +   TYPM++++
Sbjct:  138 LVSGAIAGAVSRTFVAPLETIRTHLMVG---SIGVDSMAGVFQWIMQNEGWTGLFRGNAVNVLRVAPSKAIEHFTYDTAKK-----FLTPKGDEPPKIPIPTPLVAGALAGFASTLCTYPMELIK 254          
The following BLAST results are available for this feature:
BLAST of CK935744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
GDC_MOUSE3.360e-1738.58Graves disease carrier protein homolog OS=Mus musc... [more]
GDC_BOVIN3.360e-1739.37Graves disease carrier protein OS=Bos taurus GN=SL... [more]
S2542_HUMAN9.777e-1741.09Solute carrier family 25 member 42 OS=Homo sapiens... [more]
TAAC_ARATH1.668e-1634.91Thylakoid ADP,ATP carrier protein, chloroplastic O... [more]
SCMC3_MOUSE2.178e-1640.16Calcium-binding mitochondrial carrier protein SCaM... [more]
MCFA_DICDI3.715e-1636.80Mitochondrial substrate carrier family protein A O... [more]
MCFV_DICDI8.276e-1635.17Mitochondrial substrate carrier family protein V O... [more]
GDC_RAT1.081e-1537.69Graves disease carrier protein (Fragment) OS=Rattu... [more]
EAAC_ARATH7.006e-1535.94Probable envelope ADP,ATP carrier protein, chlorop... [more]
BT1_MAIZE9.151e-1537.60Protein brittle-1, chloroplastic/amyloplastic OS=Z... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_A08 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935744 ID=CK935744; Name=CK935744; organism=Citrus sinensis; type=EST; length=796bp
GGGGGCTTATATAGATACACAAATGATGACGTCCAAATGAGCGCACGCCG
TCACTCGCACAGAGTCACAAAAGTTGACACTCCACTTTCAGTCCTCGGAA
GCCGTCAACAAAATCTTCGTCAGTAACAGATGCAAATTATCATCGCCGCC
CGATAATCGCCGGAGATCCGACACCCGACCGATCAATTGAAAGTGCGAAA
GGACACGACTGCTTGCTGTCTGTCTTTTTCTGGTAGCCTAGGGTTTGGTA
TCATTGATGGCTTCGGAGGATGTGAAGACGAGCGAATCGGCGGTGTCGAA
GATCGTTAATCTGGCGGAAGAGGCCAAGCTTGCAGGAGAAGGCGTCAAAG
CCCCAAGCTATGCTGTTCTCAGTATTTGCAAATCTCTCGTTGCTGGAGGA
GTTGCCGGCGCAGTATCTCGCACTGCTGTTGCTCCATTGGAACGATTGAA
AATACTACTACAGGTGCAGAATCCCCACAGTATAAAATATAATGGAACGA
TTCAAGGTTTGAAATATATATGGAGAACTGAAGGATTTCGCGGACTGTTT
AAAGGCAATGGTACCAATTGCGCACGTATTGTTCCAAACTCAGCTGTCAA
ATTTTTCAGCTATGAGCAAGCTTCTAAGGGAATACTGTATCTGTATCAGC
ATCACACTGGAAATGAAGATGCTGAACTCACTCCTCTTTTACGCCTTGGA
GCTGGAGCATGTGCTGGAATAATTGCCATGTCTGCCACTTACCCCATGGA
TATGGTACGGGGGGAGGCTAACTNTTCAGACAGAAAAGTCTCCATA
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