CK935744

Overview
NameCK935744
Unique NameCK935744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: TPC1_ASPTN (Mitochondrial thiamine pyrophosphate carrier 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tpc1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.237e-11
Identity = 51/136 (37.50%), Postives = 73/136 (53.68%), Query Frame = 2
Query:  386 LVAGGVAGAVSRTAVAPLERLKILLQVQ-----NPHSIK------YNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            ++AGG+AG VSR  VAPL+ +KI LQ+Q     +P S +      Y GTI  ++ I R EG  GL+KGN       V    V+F +Y   ++ +  L  H          P+    AGA AG +A +ATYP+D++R
Sbjct:   18 VLAGGIAGLVSRFCVAPLDVVKIRLQLQIHSLSDPSSHRNVSGPIYKGTISTMRAIIREEGITGLWKGNIPAELMYVCYGGVQFTTYRTTTQALAQL-PHRLPQ------PVESFVAGASAGGLATAATYPLDLLR 146          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: S2541_HUMAN (Solute carrier family 25 member 41 OS=Homo sapiens GN=SLC25A41 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.237e-11
Identity = 43/130 (33.08%), Postives = 71/130 (54.62%), Query Frame = 2
Query:  371 SICKSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            ++ K L++G +AGAVSRT  APL+R K+ +QV +  +  +   + GL+ + +  GFR L++GNG N  +I P  A+KF  +EQ       +       E        RL AG+ A  I+ +   PM++++
Sbjct:   91 ALWKFLLSGAMAGAVSRTGTAPLDRAKVYMQVYSSKT-NFTNLLGGLQSMVQEGGFRSLWRGNGINVLKIAPEYAIKFSVFEQCKNYFCGIQGSPPFQE--------RLLAGSLAVAISQTLINPMEVLK 211          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: ADT2_RAT (ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 1.237e-11
Identity = 48/145 (33.10%), Postives = 72/145 (49.66%), Query Frame = 2
Query:  362 AVLSICKSLVAGGVAGAVSRTAVAPLERLKILLQVQNPH-----SIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFF---SYEQASKGIL----YLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            A +S  K  +AGGVA A+S+TAVAP+ER+K+LLQVQ+         +Y G I  +  I + +G    ++GN  N  R  P  A+ F     Y+Q   G +      +++  GN          L +G  AG  ++   YP+D  R
Sbjct:    4 AAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGN----------LASGGAAGATSLCFVYPLDFAR 138          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: ADT2_MOUSE (ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 1.237e-11
Identity = 48/145 (33.10%), Postives = 72/145 (49.66%), Query Frame = 2
Query:  362 AVLSICKSLVAGGVAGAVSRTAVAPLERLKILLQVQNPH-----SIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFF---SYEQASKGIL----YLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            A +S  K  +AGGVA A+S+TAVAP+ER+K+LLQVQ+         +Y G I  +  I + +G    ++GN  N  R  P  A+ F     Y+Q   G +      +++  GN          L +G  AG  ++   YP+D  R
Sbjct:    4 AAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGN----------LASGGAAGATSLCFVYPLDFAR 138          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: ADT2_HUMAN (ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 PE=1 SV=6)

HSP 1 Score: 70.4774 bits (171), Expect = 1.237e-11
Identity = 48/145 (33.10%), Postives = 72/145 (49.66%), Query Frame = 2
Query:  362 AVLSICKSLVAGGVAGAVSRTAVAPLERLKILLQVQNPH-----SIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFF---SYEQASKGIL----YLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            A +S  K  +AGGVA A+S+TAVAP+ER+K+LLQVQ+         +Y G I  +  I + +G    ++GN  N  R  P  A+ F     Y+Q   G +      +++  GN          L +G  AG  ++   YP+D  R
Sbjct:    4 AAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGN----------LASGGAAGATSLCFVYPLDFAR 138          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: ADT2_BOVIN (ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=2 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 1.237e-11
Identity = 48/145 (33.10%), Postives = 72/145 (49.66%), Query Frame = 2
Query:  362 AVLSICKSLVAGGVAGAVSRTAVAPLERLKILLQVQNPH-----SIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFF---SYEQASKGIL----YLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            A +S  K  +AGGVA A+S+TAVAP+ER+K+LLQVQ+         +Y G I  +  I + +G    ++GN  N  R  P  A+ F     Y+Q   G +      +++  GN          L +G  AG  ++   YP+D  R
Sbjct:    4 AAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGN----------LASGGAAGATSLCFVYPLDFAR 138          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: TPC1_NEUCR (Mitochondrial thiamine pyrophosphate carrier 1 OS=Neurospora crassa GN=tpc-1 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.615e-11
Identity = 48/141 (34.04%), Postives = 76/141 (53.90%), Query Frame = 2
Query:  392 AGGVAGAVSRTAVAPLERLKILLQVQNPHSIK-----------------YNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLR-LGAGACAGIIAMSATYPMDMVR 760
            AG  AG +SR  +APL+ +KI LQ+Q+ HS+                  Y GT+  +++I RTEG  GL+KGN       V  +AV+F +Y   ++   +L      +++ +L P +    AGA AG +A + TYP+D++R
Sbjct:   20 AGATAGLISRFVIAPLDVVKIRLQLQH-HSLSDPLLHQRRAEIIGGGPVYKGTLPTIRHILRTEGLTGLWKGNIPAELLYVSYAAVQFTTYRSITQ---FLQAAFPKDQNKQLPPSVESFIAGASAGGVATAVTYPLDLLR 156          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: ADT_DICDI (Mitochondrial substrate carrier family protein ancA OS=Dictyostelium discoideum GN=ancA PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.615e-11
Identity = 44/137 (32.12%), Postives = 68/137 (49.64%), Query Frame = 2
Query:  365 VLSICKSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHS-----IKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            V S  K  + GG AG VS+T VAP+ER+K+LLQVQ+  +      +Y G +     + + +G   L++GN  N  R  P  A+ F   ++  K     +  HT  E+     +  L +G  AG  ++   YP+D  R
Sbjct:    9 VSSFVKDSLIGGTAGGVSKTIVAPIERVKLLLQVQSASTQIAADKQYKGIVDCFVRVSKEQGVISLWRGNLANVIRYFPTQALNFAFKDKYKK----FFVRHTAKENPTKFFIGNLLSGGAAGATSLLFVYPLDFAR 141          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: ADT2_PONAB (ADP/ATP translocase 2 OS=Pongo abelii GN=SLC25A5 PE=2 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 2.110e-11
Identity = 48/145 (33.10%), Postives = 72/145 (49.66%), Query Frame = 2
Query:  362 AVLSICKSLVAGGVAGAVSRTAVAPLERLKILLQVQNPH-----SIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFF---SYEQASKGIL----YLYQHHTGNEDAELTPLLRLGAGACAGIIAMSATYPMDMVR 760
            A +S  K  +AGGVA A+S+TAVAP+ER+K+LLQVQ+         +Y G I  +  I + +G    ++GN  N  R  P  A+ F     Y+Q   G +      +++  GN          L +G  AG  ++   YP+D  R
Sbjct:    4 AAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRHFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGN----------LASGGAAGATSLCFVYPLDFAR 138          
BLAST of CK935744 vs. ExPASy Swiss-Prot
Match: TPC1_YARLI (Mitochondrial thiamine pyrophosphate carrier 1 OS=Yarrowia lipolytica GN=TPC1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.755e-11
Identity = 50/135 (37.04%), Postives = 69/135 (51.11%), Query Frame = 2
Query:  368 LSICKSLVAGGVAGAVSRTAVAPLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYLYQHHTGNEDAELTPL----LRLGAGACAGIIAMSATYPMDMVR 760
            +S  +S++ GG+AG VSR  +APL+ +KI LQ+Q   S  Y G  Q ++ I R EG   L+KGN       V   A +F +Y   ++ I      +  NE AE   +        AGA AG  A  ATYP D+ R
Sbjct:   11 ISSTESMLCGGIAGMVSRFCIAPLDVVKIRLQLQKDGSRYYRGIFQTMQQIVRDEGVTALWKGNIPAELLYVFYGATQFVTYHHVNQVI------NAYNETAEKWKISSGAQSFIAGATAGAGATIATYPFDLFR 139          
The following BLAST results are available for this feature:
BLAST of CK935744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
TPC1_ASPTN1.237e-1137.50Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
S2541_HUMAN1.237e-1133.08Solute carrier family 25 member 41 OS=Homo sapiens... [more]
ADT2_RAT1.237e-1133.10ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc2... [more]
ADT2_MOUSE1.237e-1133.10ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 P... [more]
ADT2_HUMAN1.237e-1133.10ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 P... [more]
ADT2_BOVIN1.237e-1133.10ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=... [more]
TPC1_NEUCR1.615e-1134.04Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
ADT_DICDI1.615e-1132.12Mitochondrial substrate carrier family protein anc... [more]
ADT2_PONAB2.110e-1133.10ADP/ATP translocase 2 OS=Pongo abelii GN=SLC25A5 P... [more]
TPC1_YARLI2.755e-1137.04Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_A08 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935744 ID=CK935744; Name=CK935744; organism=Citrus sinensis; type=EST; length=796bp
GGGGGCTTATATAGATACACAAATGATGACGTCCAAATGAGCGCACGCCG
TCACTCGCACAGAGTCACAAAAGTTGACACTCCACTTTCAGTCCTCGGAA
GCCGTCAACAAAATCTTCGTCAGTAACAGATGCAAATTATCATCGCCGCC
CGATAATCGCCGGAGATCCGACACCCGACCGATCAATTGAAAGTGCGAAA
GGACACGACTGCTTGCTGTCTGTCTTTTTCTGGTAGCCTAGGGTTTGGTA
TCATTGATGGCTTCGGAGGATGTGAAGACGAGCGAATCGGCGGTGTCGAA
GATCGTTAATCTGGCGGAAGAGGCCAAGCTTGCAGGAGAAGGCGTCAAAG
CCCCAAGCTATGCTGTTCTCAGTATTTGCAAATCTCTCGTTGCTGGAGGA
GTTGCCGGCGCAGTATCTCGCACTGCTGTTGCTCCATTGGAACGATTGAA
AATACTACTACAGGTGCAGAATCCCCACAGTATAAAATATAATGGAACGA
TTCAAGGTTTGAAATATATATGGAGAACTGAAGGATTTCGCGGACTGTTT
AAAGGCAATGGTACCAATTGCGCACGTATTGTTCCAAACTCAGCTGTCAA
ATTTTTCAGCTATGAGCAAGCTTCTAAGGGAATACTGTATCTGTATCAGC
ATCACACTGGAAATGAAGATGCTGAACTCACTCCTCTTTTACGCCTTGGA
GCTGGAGCATGTGCTGGAATAATTGCCATGTCTGCCACTTACCCCATGGA
TATGGTACGGGGGGAGGCTAACTNTTCAGACAGAAAAGTCTCCATA
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