CK935747

Overview
NameCK935747
Unique NameCK935747
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.765e-50
Identity = 106/164 (64.63%), Postives = 121/164 (73.78%), Query Frame = 3
Query:  120 MSLIPSLFGNRRSS-VFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            MSLIP +FG+RRSS +FDPFS+DV+DPFR+                 GE SAF NTR+DWKETPEAHVFKADLPGL              LQISG+RN+EKEDK+D W RVERSSG F RRFRLPENAKMD++KASMENGVLTVTVPK EE KK  V++I+ISG
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPGTNS---------GETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPK-EEMKKPDVKSIEISG 154          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.933e-50
Identity = 103/166 (62.05%), Postives = 119/166 (71.69%), Query Frame = 3
Query:  120 MSLIPSLFGNRR--SSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEA-KKAHVRAIQISG 608
            MSLIPS FGN R  +S+FDPFSLDVWDPF++                 GE SA  N RVDWKET EAHVFKADLPG+              L+ISG+R++EKE+K DTWHRVERSSG FSR+F+LPEN KMD++KASMENGVLTVTVPK EEA KKA V++I ISG
Sbjct:    1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLS---------GETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.549e-49
Identity = 101/163 (61.96%), Postives = 115/163 (70.55%), Query Frame = 3
Query:  120 MSLIPSLFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            MS+IPS FG RRS+VFDPFSLDVWDPF+D                  E +AFVNT +DWKETP+AHVFKADLPGL              LQISG+RN EKE+K+D WHRVERSSG F RRFRLPENAK+D +KA+M NGV+TVTVPK  E KK  V+AI ISG
Sbjct:    1 MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSASEFGK-----ETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKV-EIKKPEVKAIDISG 157          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.386e-47
Identity = 99/167 (59.28%), Postives = 116/167 (69.46%), Query Frame = 3
Query:  120 MSLIPSLFGNRR---SSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAE-EAKKAHVRAIQISG 608
            MSLIPS FGN R   +++FDPFSLDVWDPF++                   +SA  N RVDWKET EAHVFKADLPG+              L+ISG+R++EKE+K DTWHRVERSSG FSR+FRLPEN KMD++KASMENGVLTVTVPK E   KKA V++I ISG
Sbjct:    1 MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKELQFPS------------SSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKKAQVKSIDISG 155          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 9.066e-47
Identity = 96/163 (58.90%), Postives = 110/163 (67.48%), Query Frame = 3
Query:  120 MSLIPSLFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            MS+IPS F ++RS++FDPFSLD WDPF+                   E +A VN R+DWKETPEAHV KADLPG+              LQISG+R  E+E+K DTWHRVERSSG F RRFRLPENAKMD +KA MENGVLTV VPK EE KK  V+AI ISG
Sbjct:    1 MSIIPSFFTSKRSNIFDPFSLDTWDPFQGIISTEPAR----------ETAAIVNARIDWKETPEAHVLKADLPGMKKEEVKVEVEDGRVLQISGERCREQEEKDDTWHRVERSSGKFIRRFRLPENAKMDEVKAMMENGVLTVVVPKEEEEKKPMVKAIDISG 153          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.184e-46
Identity = 94/163 (57.67%), Postives = 114/163 (69.94%), Query Frame = 3
Query:  120 MSLIPSLFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            MSL+PS FG RR++VFDPFSLDVWDPF                    + +AF N +VDW+ETPEAHVFKAD+PGL              LQISG+R+ E E+KSDTWHRVERSSG F RRFRLPENAK++ +KASMENGVL+VTVPK +E+ K  V+++ ISG
Sbjct:    1 MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAPAK------DVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQES-KPEVKSVDISG 156          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.546e-46
Identity = 97/163 (59.51%), Postives = 112/163 (68.71%), Query Frame = 3
Query:  120 MSLIPSLFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            MSLIPS+FG RRS+VFDPFS D+WDPF                    + +AF N RVDWKETPEAHVFKADLPGL              LQISG+R+ E E+K+D WHRVER+SG F RRFRLPENAKM+ +KA+MENGVLTV VPKA E KK  V++I ISG
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTAR---DVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPE-KKPQVKSIDISG 159          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 4.499e-46
Identity = 97/163 (59.51%), Postives = 114/163 (69.94%), Query Frame = 3
Query:  120 MSLIPSLFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            MSLIPS+FG RR++VFDPFSLDV+DPF                    + +AF N +VDW+ETPEAHVFKADLPGL              LQISG+R+ E E+K+D WHRVERSSG F+RRFRLPENAKM+ IKASMENGVL+VTVPK  E KK  V++I ISG
Sbjct:    1 MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAM-----DVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTVPKVPE-KKPEVKSIDISG 157          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.876e-46
Identity = 95/163 (58.28%), Postives = 112/163 (68.71%), Query Frame = 3
Query:  120 MSLIPSLFGNRRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            MS+IPS FG+RRS+V +PFSLD+WDPF+D                  E +AF NT +DWKETP+AHVFKADLPGL              LQISG+RN EKE+K++ WHRVE SSG F RRFRLPENA +D +KA MENGVLTVTVPK  E KK  V++I ISG
Sbjct:    1 MSIIPSFFGSRRSNVLNPFSLDIWDPFQDYPLITSSGTSSEFGK---ETAAFANTHIDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGVLTVTVPKV-EMKKPEVKSIHISG 159          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.809e-45
Identity = 94/146 (64.38%), Postives = 106/146 (72.60%), Query Frame = 3
Query:  168 DPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQIS 605
            DPFSLDVWDPF+D                  E SAFV+TR+DWKETPEAHVFKADLPGL              LQISG+RN+EKEDK+D WHRVERSSG F RRFRLPENAKMD++KA+MENGVLTVTVPK EE KK  V++I+IS
Sbjct:    1 DPFSLDVWDPFKDFPFTNSALSASSFPQ---ENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPK-EEIKKPEVKSIEIS 142          
The following BLAST results are available for this feature:
BLAST of CK935747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
HSP11_SOLPE1.765e-5064.6317.7 kDa class I heat shock protein OS=Solanum per... [more]
HS178_ARATH3.933e-5062.0517.8 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP11_DAUCA2.549e-4961.9617.8 kDa class I heat shock protein OS=Daucus caro... [more]
HS17A_ARATH2.386e-4759.2817.6 kDa class I heat shock protein 1 OS=Arabidops... [more]
HSP11_HELAN9.066e-4758.9017.6 kDa class I heat shock protein OS=Helianthus ... [more]
HSP17_ARATH1.184e-4657.6717.4 kDa class I heat shock protein OS=Arabidopsis... [more]
HS181_ARATH1.546e-4659.5118.1 kDa class I heat shock protein OS=Arabidopsis... [more]
HS17C_ARATH4.499e-4659.5117.6 kDa class I heat shock protein 3 OS=Arabidops... [more]
HSP12_DAUCA5.876e-4658.2818.0 kDa class I heat shock protein OS=Daucus caro... [more]
HSP11_MEDSA3.809e-4564.3818.1 kDa class I heat shock protein (Fragment) OS=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_A12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935747 ID=CK935747; Name=CK935747; organism=Citrus sinensis; type=EST; length=797bp
GGGACCAGAAAGCAACTTTCCCAAAGGCACTTACTTTTTCTGCATTCGGT
GACAAGTACTTTTTATTAGTCGATAGAGGAAACAGAGAGGGAAAACAAAA
AACAGGAAAGATAAGGAAAATGTCGCTGATTCCAAGCCTCTTCGGCAACC
GACGCAGCAGTGTGTTCGATCCGTTCTCACTCGACGTTTGGGATCCATTC
AGGGACTTCCCTCTCTCTGCTTCTTCTTTTCCATCTGCGGTGTCCTCTCA
GTTCCCTGGAGAAGCCTCTGCTTTCGTTAATACCCGCGTGGACTGGAAGG
AAACCCCAGAGGCCCACGTGTTCAAGGCTGATCTTCCGGGGCTAAGGAAA
GAGGAGGTGAAGGTCGAGGTTGAGGATGATAGGGTGCTTCAGATAAGCGG
GCAGAGGAACATTGAGAAGGAAGACAAGAGCGACACGTGGCATCGCGTGG
AGCGTAGCAGTGGCATGTTCTCGAGGAGGTTCAGGCTGCCGGAGAATGCG
AAGATGGACCGCATTAAGGCTTCAATGGAGAACGGTGTGCTTACTGTTAC
CGTTCCTAAAGCGGAGGAGGCCAAGAAAGCTCATGTCAGGGCTATTCAAA
TCTCTGGCTGACTAATTAATAAACAAAGACAATAAATAATTGTATGATAA
GTTTTATGGTTTGGTTTGGTCTATGTATCATGTGAAGTCTGTCTTTGTCT
ACTGAGATCGAGTGTCTTTGTTTGTAATGGGGATGTCAGAATGGGAATAA
TAATGTAATTTCGTAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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