CK935747

Overview
NameCK935747
Unique NameCK935747
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3579 contig Csv1_Contig3579:100..896. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.183e-44
Identity = 92/153 (60.13%), Postives = 106/153 (69.28%), Query Frame = 3
Query:  150 RRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            RRS+VFDPFSLD+WDPF                    + +AF N R+DWKETPE+HVFKADLPG+              L ISGQR+ EKEDK+D WHRVERSSG F RRFRLPENAK+D++KA MENGVLTVTVPKA E KK  V+AI+ISG
Sbjct:    5 RRSNVFDPFSLDLWDPFDSVFRSVVPATSD------NDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVTVPKA-EVKKPEVKAIEISG 150          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.600e-43
Identity = 91/153 (59.48%), Postives = 106/153 (69.28%), Query Frame = 3
Query:  150 RRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            RRS+VFDPFSLD+WDPF                    + +AF N R+DWKETPE+HVFKADLPG+              L ISGQR+ EKEDK+D WHRVERSSG F RRFRLPENAK+D++KA +ENGVLTVTVPKA E KK  V+AI+ISG
Sbjct:    5 RRSNVFDPFSLDLWDPFDSVFRSVVPATSD------NDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTVPKA-EVKKPEVKAIEISG 150          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.656e-43
Identity = 93/158 (58.86%), Postives = 107/158 (67.72%), Query Frame = 3
Query:  150 RRSSVFDPFSLDVWDPFR-----DXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            RRS+VFDPFSLD+WDPF                         E +AF   R+DWKETPEAHVFKAD+PGL              LQISG+RN E+E+K+D WHRVERSSG F RRFRLP+NAK ++IKASMENGVLTVTVPK EEAKK  V++IQISG
Sbjct:    5 RRSNVFDPFSLDLWDPFDGFPFGSGGSSSGSIFPSFPRGASSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASMENGVLTVTVPK-EEAKKPDVKSIQISG 161          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.769e-42
Identity = 94/164 (57.32%), Postives = 111/164 (67.68%), Query Frame = 3
Query:  120 MSLIPSLFGN--RRSSVFDPFSLD-VWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQI 602
            MSLIP+ + N  RRS++FDPFSLD +WDPF                    E +AF N R+DWKETPEAHVFKADLPG+              L+ISGQR  EKE+K+DTWHRVERSSG F R+FRLPENAK+D++KA MENGVLTVTVPK  EA K  V+AI +
Sbjct:    1 MSLIPNNWFNTGRRSNIFDPFSLDEIWDPF---FGLPSTLSTVPRSETAAETAAFANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENGVLTVTVPK-NEAPKPQVKAINV 160          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.781e-42
Identity = 92/153 (60.13%), Postives = 105/153 (68.63%), Query Frame = 3
Query:  150 RRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            RRS+VFDPF+ D WDPF                    + +AF N RVDWKETPE+HVFKADLPG+              L ISGQR+ EKEDK+D WHRVERSSG F RRFRLPENAK+D++KASMENGVLTVTVPKA E KK  V+AI+ISG
Sbjct:    5 RRSNVFDPFA-DFWDPFDGVFRSLVPATSDR------DTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPKA-EVKKPEVKAIEISG 149          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 1.147e-41
Identity = 90/153 (58.82%), Postives = 105/153 (68.63%), Query Frame = 3
Query:  150 RRSSVFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            RRS+VFDPFSLD+WDPF                    +A+AF   R+DWKETPEAHVFKAD+PGL              LQISG+R  E+E+K+D WHRVERSSG F RRFRLPEN K ++IKASMENGVLTVTVPK EE KK  V++IQI+G
Sbjct:    5 RRSNVFDPFSLDLWDPF--DGFPFGSGSGSLFPRANSDAAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPK-EEPKKPDVKSIQITG 154          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.555e-41
Identity = 89/158 (56.33%), Postives = 105/158 (66.46%), Query Frame = 3
Query:  150 RRSSVFDPFSLDVWDPFR-----DXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            RRS+VFDPFSLD+WDPF                         E +AF   R+DWKETPEAHVFKAD+PGL              LQISG+R+ E+E+K+D WHRVERSSG F RRFRLPEN K ++IKASMENGVLTVTVPK EE KK  V++IQ++G
Sbjct:    5 RRSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPK-EEPKKPDVKSIQVTG 161          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.709e-41
Identity = 89/156 (57.05%), Postives = 103/156 (66.03%), Query Frame = 3
Query:  150 RRSSVFDPFSLDVWDP---FRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            RR + FDPFSLD+WDP   F                    +A+AF   R+DWKETPE HVFKAD+PGL              LQISG+R+ E+E+KSD WHRVERSSG F RRFRLPEN K ++IKASMENGVLTVTVPK EE KK  V++IQISG
Sbjct:    5 RRGNAFDPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPK-EEPKKPDVKSIQISG 159          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.024e-38
Identity = 87/154 (56.49%), Postives = 103/154 (66.88%), Query Frame = 3
Query:  150 RRSSVFDPFSLDVW-DPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            RRS+VFDPF+ D+W DPF                    E +AF N RVDWKETPEAHVFK DLPG+              L +SG+R+ EKEDK+D WHRVERSSG F RRFRLPE+AK++ +KA +ENGVLTVTVPKA E KK  V+AI+ISG
Sbjct:    5 RRSNVFDPFA-DLWADPF-----DTFRSIVPAISGGSSETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVLTVTVPKA-EVKKPEVKAIEISG 151          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.923e-37
Identity = 86/154 (55.84%), Postives = 102/154 (66.23%), Query Frame = 3
Query:  150 RRSSVFDPFSLDVW-DPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            RR++VFDPF+ D+W DPF                    E +AF N R+DWKETPEAHVFKADLPG+              L +SG+R  EKEDK+D WHRVERSSG F RRFRL E+AK++ +KA +ENGVLTVTVPKA E KK  V+AIQISG
Sbjct:    5 RRTNVFDPFA-DLWADPF-----DTFRSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKA-EVKKPEVKAIQISG 151          
The following BLAST results are available for this feature:
BLAST of CK935747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
HS16B_ORYSJ7.183e-4460.1316.9 kDa class I heat shock protein 2 OS=Oryza sat... [more]
HS16A_ORYSJ1.600e-4359.4816.9 kDa class I heat shock protein 1 OS=Oryza sat... [more]
HS17A_ORYSJ4.656e-4358.8617.9 kDa class I heat shock protein OS=Oryza sativ... [more]
HSP11_CHERU1.769e-4257.3218.3 kDa class I heat shock protein OS=Chenopodium... [more]
HS16C_ORYSJ8.781e-4260.1316.9 kDa class I heat shock protein 3 OS=Oryza sat... [more]
HS174_ORYSJ1.147e-4158.8217.4 kDa class I heat shock protein OS=Oryza sativ... [more]
HS181_ORYSJ2.555e-4156.3318.1 kDa class I heat shock protein OS=Oryza sativ... [more]
HS177_ORYSJ9.709e-4157.0517.7 kDa class I heat shock protein OS=Oryza sativ... [more]
HS16A_WHEAT2.024e-3856.4916.9 kDa class I heat shock protein 1 OS=Triticum ... [more]
HS16B_WHEAT2.923e-3755.8416.9 kDa class I heat shock protein 2 OS=Triticum ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_A12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935747 ID=CK935747; Name=CK935747; organism=Citrus sinensis; type=EST; length=797bp
GGGACCAGAAAGCAACTTTCCCAAAGGCACTTACTTTTTCTGCATTCGGT
GACAAGTACTTTTTATTAGTCGATAGAGGAAACAGAGAGGGAAAACAAAA
AACAGGAAAGATAAGGAAAATGTCGCTGATTCCAAGCCTCTTCGGCAACC
GACGCAGCAGTGTGTTCGATCCGTTCTCACTCGACGTTTGGGATCCATTC
AGGGACTTCCCTCTCTCTGCTTCTTCTTTTCCATCTGCGGTGTCCTCTCA
GTTCCCTGGAGAAGCCTCTGCTTTCGTTAATACCCGCGTGGACTGGAAGG
AAACCCCAGAGGCCCACGTGTTCAAGGCTGATCTTCCGGGGCTAAGGAAA
GAGGAGGTGAAGGTCGAGGTTGAGGATGATAGGGTGCTTCAGATAAGCGG
GCAGAGGAACATTGAGAAGGAAGACAAGAGCGACACGTGGCATCGCGTGG
AGCGTAGCAGTGGCATGTTCTCGAGGAGGTTCAGGCTGCCGGAGAATGCG
AAGATGGACCGCATTAAGGCTTCAATGGAGAACGGTGTGCTTACTGTTAC
CGTTCCTAAAGCGGAGGAGGCCAAGAAAGCTCATGTCAGGGCTATTCAAA
TCTCTGGCTGACTAATTAATAAACAAAGACAATAAATAATTGTATGATAA
GTTTTATGGTTTGGTTTGGTCTATGTATCATGTGAAGTCTGTCTTTGTCT
ACTGAGATCGAGTGTCTTTGTTTGTAATGGGGATGTCAGAATGGGAATAA
TAATGTAATTTCGTAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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