CK935747

Overview
NameCK935747
Unique NameCK935747
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.526e-28
Identity = 73/159 (45.91%), Postives = 87/159 (54.72%), Query Frame = 3
Query:  150 RRSSVFDPFSLDVW---DPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKE---DKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            R  +V DP S+D W   DPF                          N RVDWKETP AHVF ADLPG+              L ISG+R  E++      + WH VERSSG F RRFRLP  A++D++ ASM+NGVLTVTVPK EE KK  ++AI ISG
Sbjct:    5 RSGNVLDPMSVDFWADADPF------------GAVRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPK-EETKKPQLKAIPISG 150          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.172e-26
Identity = 58/74 (78.38%), Postives = 67/74 (90.54%), Query Frame = 3
Query:  387 LQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            LQISG+RN+EKEDK+DTWHRVERSSG F R FRLP+NAK+D++KASMENGVLTVTVPK EE KK  V+AI+ISG
Sbjct:    2 LQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPK-EEIKKPDVKAIEISG 74          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.408e-23
Identity = 57/117 (48.72%), Postives = 71/117 (60.68%), Query Frame = 3
Query:  261 EAS-AFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            EAS A    RVDWKETPE HV   D+PGL              L++SG+R  E+E K D WHRVERS G F R+FRLP+N  +D +KA +ENGVLT+T+ K    K    R + I+G
Sbjct:   59 EASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPGKIKGPRVVSIAG 175          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.469e-22
Identity = 51/108 (47.22%), Postives = 66/108 (61.11%), Query Frame = 3
Query:  279 NTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQI 602
            + RVDWKETPE HV   D+PGL              L++SG+R  E++ K D WHRVERS G F R+F+LP+N  +D +KA MENGVLT+T+ K    K    R + I
Sbjct:   74 HARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTLHKLSHDKIKGPRMVSI 181          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.917e-22
Identity = 63/179 (35.20%), Postives = 88/179 (49.16%), Query Frame = 3
Query:  120 MSLIPSLFGNRRSSV-----------------FDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQIS 605
            MS+I S+ G ++++                   +P S+D+ +PF D                   A       +DWKET  AHVF AD+PG+              L+ISGQR    E+K + WHRVERSS  F R  RLP NA  D + A+++NGVLT+T+PK +  +K H R I I+
Sbjct:    1 MSMITSMLGRKQNAQQKGGGGGGRTGGGGGGEIEPVSVDIMEPFMDAISLTAFAAAPSAAA--AAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVLTITIPK-DNDRKPHARIIPIT 176          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.458e-20
Identity = 48/107 (44.86%), Postives = 63/107 (58.88%), Query Frame = 3
Query:  285 RVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQIS 605
            RVDWKET E H    D+PGL              L++SG+R  E+E K D WHRVERS G F R+F+LP+N  M+ +KA +ENGVLT+ + K    K    R + I+
Sbjct:   72 RVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSPEKVKGPRVVNIA 178          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.998e-19
Identity = 52/145 (35.86%), Postives = 78/145 (53.79%), Query Frame = 3
Query:  162 VFDPFSLDVWDPFRDXXXXXXXXXXXXXXXXXGEASAFVNTRVDWKETPEAHVFKADLP-GLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRA 593
            +FD  + D W+PF                    + SAF NT ++ +ET EA+VF+ADLP G+              L I+G+R++ +E+K    H +ERS   F  RF LP++A +D ++ASM+ G+LTVTVPK    K+  + A
Sbjct:    6 LFDTLAFDAWNPFS-----IFGTTVAADAWLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGMLTVTVPKVVTDKQPAIAA 145          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.573e-17
Identity = 51/125 (40.80%), Postives = 69/125 (55.20%), Query Frame = 3
Query:  258 GEASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXX-LQISGQRNI-----EKEDKSD--TWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQISG 608
            GE +A    R DWKETPEAHV   D+PG+               L++SG+R       E+E + D   WHR ER++G F RRFR+P  A + R+ A +++GVLTVTVPK    +    R + I G
Sbjct:   64 GEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVLTVTVPKVPGHRGREPRVVAIDG 188          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 9.151e-15
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 3
Query:  285 RVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRN----IEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPK 560
            RVDW+ET +AH    D+PG+              L+ISG+R      E++   D WHR ERS G F R+ RLP+NA +D I AS++NGVLTV   K
Sbjct:   77 RVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVLTVRFRK 172          
BLAST of CK935747 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.477e-14
Identity = 41/111 (36.94%), Postives = 61/111 (54.95%), Query Frame = 3
Query:  288 VDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSS-----GMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKAHVRAIQIS 605
            +DW E+  +H+FK ++PG               L I G+   E++ ++  WH  ER +       F RR  LPEN K+D++KA +ENGVLTV VPK   +K + VR + I+
Sbjct:   24 IDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTVVVPKDTSSKSSKVRNVNIT 134          
The following BLAST results are available for this feature:
BLAST of CK935747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
HS166_ORYSJ5.526e-2845.9116.6 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP12_SOYBN5.172e-2678.38Class I heat shock protein (Fragment) OS=Glycine m... [more]
HSP41_SOYBN1.408e-2348.7222.0 kDa class IV heat shock protein OS=Glycine ma... [more]
HSP41_PEA3.469e-2247.2222.7 kDa class IV heat shock protein OS=Pisum sati... [more]
HS189_ORYSJ5.917e-2235.2018.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP22_ARATH1.458e-2044.8622.0 kDa heat shock protein OS=Arabidopsis thalian... [more]
HS17B_ORYSJ7.998e-1935.8617.9 kDa heat shock protein 2 OS=Oryza sativa subs... [more]
HS219_ORYSJ2.573e-1740.8021.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS232_ORYSJ9.151e-1544.7923.2 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS157_ARATH3.477e-1436.9415.7 kDa heat shock protein, peroxisomal OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_A12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935747 ID=CK935747; Name=CK935747; organism=Citrus sinensis; type=EST; length=797bp
GGGACCAGAAAGCAACTTTCCCAAAGGCACTTACTTTTTCTGCATTCGGT
GACAAGTACTTTTTATTAGTCGATAGAGGAAACAGAGAGGGAAAACAAAA
AACAGGAAAGATAAGGAAAATGTCGCTGATTCCAAGCCTCTTCGGCAACC
GACGCAGCAGTGTGTTCGATCCGTTCTCACTCGACGTTTGGGATCCATTC
AGGGACTTCCCTCTCTCTGCTTCTTCTTTTCCATCTGCGGTGTCCTCTCA
GTTCCCTGGAGAAGCCTCTGCTTTCGTTAATACCCGCGTGGACTGGAAGG
AAACCCCAGAGGCCCACGTGTTCAAGGCTGATCTTCCGGGGCTAAGGAAA
GAGGAGGTGAAGGTCGAGGTTGAGGATGATAGGGTGCTTCAGATAAGCGG
GCAGAGGAACATTGAGAAGGAAGACAAGAGCGACACGTGGCATCGCGTGG
AGCGTAGCAGTGGCATGTTCTCGAGGAGGTTCAGGCTGCCGGAGAATGCG
AAGATGGACCGCATTAAGGCTTCAATGGAGAACGGTGTGCTTACTGTTAC
CGTTCCTAAAGCGGAGGAGGCCAAGAAAGCTCATGTCAGGGCTATTCAAA
TCTCTGGCTGACTAATTAATAAACAAAGACAATAAATAATTGTATGATAA
GTTTTATGGTTTGGTTTGGTCTATGTATCATGTGAAGTCTGTCTTTGTCT
ACTGAGATCGAGTGTCTTTGTTTGTAATGGGGATGTCAGAATGGGAATAA
TAATGTAATTTCGTAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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