CK935750

Overview
NameCK935750
Unique NameCK935750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length342
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: CYP11_CAEEL (Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorhabditis elegans GN=cyn-11 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.014e-24
Identity = 57/106 (53.77%), Postives = 69/106 (65.09%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNK-PVVIADCGQL 322
            FM Q             SIYGSKF DENF  KH GPG+LSMANAG  TNG QFF+  AKT++LD KHVVFG+V++GM  V+ IE V + +    K P+V+  CGQL
Sbjct:   78 FMIQGGDFCNGDGTGLMSIYGSKFRDENFELKHIGPGMLSMANAGSDTNGCQFFITCAKTDFLDNKHVVFGRVLDGMLTVRKIENVPTGANNKPKLPIVVVQCGQL 183          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: RBP2_MOUSE (E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.436e-24
Identity = 55/105 (52.38%), Postives = 65/105 (61.90%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQL 322
            F+CQ            +SIYG KF DENF  KHTGPG+LSMAN G  TN SQFF+   K E LD KHVVFG V +GMD V+ IE   S  G  ++ + I +CGQL
Sbjct: 2949 FICQGGDITKYNGTGGQSIYGDKFDDENFDLKHTGPGLLSMANYGQNTNSSQFFITLKKAEHLDFKHVVFGFVKDGMDTVRKIESFGSPKGSVSRRICITECGQL 3053          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPID_BOVIN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Bos taurus GN=PPID PE=1 SV=6)

HSP 1 Score: 110.153 bits (274), Expect = 3.436e-24
Identity = 57/105 (54.29%), Postives = 65/105 (61.90%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQL 322
            FM Q            ESIYG KF DENF  KH   G+LSMANAG  TNGSQFF+ T  T  LDGKHVVFGQV++GM V K +E V     +  K  VIA+CG+L
Sbjct:   80 FMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAKLCVIAECGEL 184          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIB_ARTBE (Peptidyl-prolyl cis-trans isomerase B OS=Arthroderma benhamiae GN=CPR2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.436e-24
Identity = 57/106 (53.77%), Postives = 68/106 (64.15%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKV-RSSSGRTNKPVVIADCGQL 322
            FM Q            +SIYG+KF DENF  +HT  G+LSMANAG  TNGSQFF+ TA T WLDGKHVVFG+V+EG D+V  I+ V +    R  K V I  CG+L
Sbjct:   91 FMIQGGDFTNGDGTGGKSIYGNKFEDENFKLRHTKKGVLSMANAGKDTNGSQFFITTAITAWLDGKHVVFGEVLEGYDIVDKIQVVPKGFQDRPTKDVKIVKCGEL 196          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIA_STRCH (Peptidyl-prolyl cis-trans isomerase A OS=Streptomyces chrysomallus GN=ppiA PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.436e-24
Identity = 59/107 (55.14%), Postives = 69/107 (64.49%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVV--EGMDVVKAIEKVRSSSGRTNKPVVIADCGQL 322
            FM Q            +SIYG KFADENF  KH   G+LSMANAG  TNGSQFF+ T  T WLDGKHVVFG+V   + M +V+ IE + SSSGRT+  V IA+ G L
Sbjct:   59 FMLQGGDFTRGDGTGGKSIYGEKFADENFQLKHDRVGLLSMANAGKNTNGSQFFITTVLTPWLDGKHVVFGEVADDDSMALVRKIEALGSSSGRTSAKVTIAESGAL 165          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIH_ASPFU (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus fumigatus GN=cyp3 PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 4.487e-24
Identity = 51/89 (57.30%), Postives = 68/89 (76.40%), Query Frame = 2
Query:   59 SIYGS-KFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQL 322
            +IYG+ KFADENFV KH   G+LSMAN+GP TNG QFF+ T  T +L+GKHVVFGQVV+GMD+V+ IE  R+   + ++ V+I  CG++
Sbjct:   93 TIYGTPKFADENFVLKHDRAGVLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVVDGMDIVRMIENTRTIRDKPSQDVIITQCGEM 181          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPID_CRYNE (Peptidyl-prolyl cis-trans isomerase D OS=Cryptococcus neoformans GN=CPR6 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.487e-24
Identity = 56/107 (52.34%), Postives = 68/107 (63.55%), Query Frame = 2
Query:    5 GFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQLS 325
            GFM Q            ESIYG KF DENF  KH  P +LSMANAGPGTNGSQFF+ T  T  LDGKHVVFG+V+    +V+ IE + ++S R ++ V I+  G LS
Sbjct:   65 GFMLQGGDFTRGDGTGGESIYGEKFEDENFELKHDKPMLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGRVIYNRSLVRRIENIPTTSDRPDQAVTISSAGVLS 171          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIA_PARPR (Peptidyl-prolyl cis-trans isomerase OS=Paramecium primaurelia PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.861e-24
Identity = 53/103 (51.46%), Postives = 63/103 (61.17%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCG 316
            FM Q            +SIYG KFADENF  KHT P +LSMANAGP TNGSQFF+      WLDGKHVVFG+VV+G D ++  +K  S  G+    + I D G
Sbjct:   58 FMAQGGDFTNFNGTGGKSIYGEKFADENFKLKHTKPALLSMANAGPNTNGSQFFITFVPCPWLDGKHVVFGEVVDGFDTLELFKKNSSQQGKPKTTIKIVDSG 160          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIH_CRYNE (Peptidyl-prolyl cis-trans isomerase H OS=Cryptococcus neoformans GN=CYP3 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.654e-24
Identity = 53/91 (58.24%), Postives = 69/91 (75.82%), Query Frame = 2
Query:   59 SIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKP---VVIADCGQL 322
            SIYG++F DENF  KHTGPG+LSMAN+GP TNG QFF+ TA  E+LDGKH VFG+V++G+  V+ IE V   +G  N+P   V IA+CG++
Sbjct:   91 SIYGAQFEDENFKVKHTGPGLLSMANSGPNTNGCQFFITTAPAEFLDGKHCVFGRVIDGLLTVRKIENV--PTGANNRPKLQVRIAECGEM 179          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: CYP40_ARATH (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana GN=CYP40 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.654e-24
Identity = 57/107 (53.27%), Postives = 69/107 (64.49%), Query Frame = 2
Query:    5 GFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVR-SSSGRTNKPVVIADCGQL 322
            GFM Q            ESIYG KF DENF  KH   G+LSMAN+GP TNGSQFF+ T +T  LDGKHVVFG+V +GM VV++IE V        ++ VVI DCG++
Sbjct:   67 GFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQDVVIHDCGEI 173          
The following BLAST results are available for this feature:
BLAST of CK935750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
CYP11_CAEEL2.014e-2453.77Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorha... [more]
RBP2_MOUSE3.436e-2452.38E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=R... [more]
PPID_BOVIN3.436e-2454.2940 kDa peptidyl-prolyl cis-trans isomerase OS=Bos ... [more]
PPIB_ARTBE3.436e-2453.77Peptidyl-prolyl cis-trans isomerase B OS=Arthroder... [more]
PPIA_STRCH3.436e-2455.14Peptidyl-prolyl cis-trans isomerase A OS=Streptomy... [more]
PPIH_ASPFU4.487e-2457.30Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
PPID_CRYNE4.487e-2452.34Peptidyl-prolyl cis-trans isomerase D OS=Cryptococ... [more]
PPIA_PARPR5.861e-2451.46Peptidyl-prolyl cis-trans isomerase OS=Paramecium ... [more]
PPIH_CRYNE7.654e-2458.24Peptidyl-prolyl cis-trans isomerase H OS=Cryptococ... [more]
CYP40_ARATH7.654e-2453.27Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_B03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935750 ID=CK935750; Name=CK935750; organism=Citrus sinensis; type=EST; length=342bp
GGGGGGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCG
GAGGCGAATCAATCTACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAG
AAGCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAAC
CAACGGATCTCAGTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATG
GGAAGCACGTTGTGTTCGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAG
GCCATCGAGAAAGTGAGGTCCAGCTCCGGCAGGACCAACAAGCCCGTCGT
GATCGCTGATTGCGGTCAATTGTCTTAGATTTGATCATGATA
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