CK935750

Overview
NameCK935750
Unique NameCK935750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length342
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.306e-23
Identity = 57/106 (53.77%), Postives = 66/106 (62.26%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNK-PVVIADCGQL 322
            FM Q            ESIYG KF DENF  KHT P  LSMANAG  TNGSQFF+ T  T WLDGKHVVFG+V+EG D+V AIE   + +    K  + IAD G++
Sbjct:   88 FMIQGGDFTRGDGTGGESIYGRKFPDENFQLKHTKPYKLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGQDIVDAIENAPTGARSNPKVDITIADAGEI 193          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPID_SCHPO (40 kDa peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=wis2 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.705e-23
Identity = 54/103 (52.43%), Postives = 64/103 (62.14%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCG 316
            FM Q            ESIYG KF DENF  KH  P +LSMANAGP TNGSQFF+ T  T  LDGKHVVFG+V++G   V+ IE + + +     PVVI +CG
Sbjct:   63 FMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLETKNDDPVVPVVIEECG 165          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.705e-23
Identity = 57/107 (53.27%), Postives = 68/107 (63.55%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSG-RTNKPVVIADCGQLS 325
            FM Q            ESIYG+KF DE F  KH  P +LSMANAGP TNGSQFF+ T  T  LDGKHVVFG+V+ G  VV+ IE + + SG R  K  +I DCG+L+
Sbjct:   74 FMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVLNGKSVVRQIENLTTQSGDRPAKEALIVDCGELT 180          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: RBP2_HUMAN (E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 2.227e-23
Identity = 54/105 (51.43%), Postives = 63/105 (60.00%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQL 322
            F+CQ            +SIYG KF DENF  KHTGPG+LSMAN G  TN SQF +   K E LD KHVVFG V +GMD VK IE   S  G   + + I +CGQ+
Sbjct: 3120 FVCQGGDITKHDGTGGQSIYGDKFEDENFDVKHTGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFVKDGMDTVKKIESFGSPKGSVCRRITITECGQI 3224          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPID_CANAL (Peptidyl-prolyl cis-trans isomerase D OS=Candida albicans GN=CPR6 PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 2.227e-23
Identity = 54/92 (58.70%), Postives = 65/92 (70.65%), Query Frame = 2
Query:   56 ESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPV---VIADCGQL 322
            ESIYG KF DENF   H  P +LSMAN+GP TNGSQFF+ T  T  LDGKHVVFG+V+EG  +V+ +E  RS  G  ++PV    IADCG+L
Sbjct:   87 ESIYGEKFEDENFKLNHNKPFLLSMANSGPNTNGSQFFITTVPTPHLDGKHVVFGEVIEGKSIVRQLE--RSEKGANDRPVEDWKIADCGEL 176          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIH_HUMAN (Peptidyl-prolyl cis-trans isomerase H OS=Homo sapiens GN=PPIH PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.909e-23
Identity = 53/108 (49.07%), Postives = 71/108 (65.74%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNK---PVVIADCGQL 322
            FM Q             SIY   FADENF  +H+ PG+LSMAN+GP TNG QFF+  +K +WLDGKHVVFG++++G+ V++ IE V   +G  NK   PVVI+ CG++
Sbjct:   72 FMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENV--PTGPNNKPKLPVVISQCGEM 177          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIH_BOVIN (Peptidyl-prolyl cis-trans isomerase H OS=Bos taurus GN=PPIH PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.909e-23
Identity = 53/108 (49.07%), Postives = 71/108 (65.74%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNK---PVVIADCGQL 322
            FM Q             SIY   FADENF  +H+ PG+LSMAN+GP TNG QFF+  +K +WLDGKHVVFG++++G+ V++ IE V   +G  NK   PVVI+ CG++
Sbjct:   72 FMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENV--PTGPNNKPKLPVVISQCGEM 177          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPID_HUMAN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPID PE=1 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 2.909e-23
Identity = 55/105 (52.38%), Postives = 65/105 (61.90%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQL 322
            FM Q            ESIYG KF DENF  KH   G+LSMANAG  TNGSQFF+ T  T  LDGKHVVFGQV++G+ V + +E V     +  K  VIA+CG+L
Sbjct:   80 FMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEVKGEKPAKLCVIAECGEL 184          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPID_DEBHA (Peptidyl-prolyl cis-trans isomerase D OS=Debaryomyces hansenii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.909e-23
Identity = 55/108 (50.93%), Postives = 68/108 (62.96%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPV---VIADCGQL 322
            FMCQ            ESIYG KF DENF   H  P +LSMANAG  TNGSQFF+ T  T  L+GKHVVFG+V++G  +V+ +E  R   G  +KPV   +I+DCG+L
Sbjct:   72 FMCQGGDFTHGSGIGGESIYGEKFEDENFQLTHDKPFLLSMANAGANTNGSQFFITTVPTPHLNGKHVVFGEVIQGKSIVRQLE--RCDKGENDKPVEDWIISDCGEL 177          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIB_SCHPO (Peptidyl-prolyl cis-trans isomerase B OS=Schizosaccharomyces pombe GN=cyp4 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.799e-23
Identity = 55/107 (51.40%), Postives = 67/107 (62.62%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSS-GRTNKPVVIADCGQLS 325
            FM Q            +SIYGS+F DENF   H  PG+LSMANAGP +NGSQFF+ T KT WLDG HVVFG+V+ G D+VK I K  + +  +  + V I   GQLS
Sbjct:   83 FMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKISKAETDNRDKPLEDVKIIKSGQLS 189          
The following BLAST results are available for this feature:
BLAST of CK935750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
PPIB_YARLI1.306e-2353.77Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]
PPID_SCHPO1.705e-2352.4340 kDa peptidyl-prolyl cis-trans isomerase OS=Schi... [more]
PPID_GIBZE1.705e-2353.27Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
RBP2_HUMAN2.227e-2351.43E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=R... [more]
PPID_CANAL2.227e-2358.70Peptidyl-prolyl cis-trans isomerase D OS=Candida a... [more]
PPIH_HUMAN2.909e-2349.07Peptidyl-prolyl cis-trans isomerase H OS=Homo sapi... [more]
PPIH_BOVIN2.909e-2349.07Peptidyl-prolyl cis-trans isomerase H OS=Bos tauru... [more]
PPID_HUMAN2.909e-2352.3840 kDa peptidyl-prolyl cis-trans isomerase OS=Homo... [more]
PPID_DEBHA2.909e-2350.93Peptidyl-prolyl cis-trans isomerase D OS=Debaryomy... [more]
PPIB_SCHPO3.799e-2351.40Peptidyl-prolyl cis-trans isomerase B OS=Schizosac... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_B03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935750 ID=CK935750; Name=CK935750; organism=Citrus sinensis; type=EST; length=342bp
GGGGGGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCG
GAGGCGAATCAATCTACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAG
AAGCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAAC
CAACGGATCTCAGTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATG
GGAAGCACGTTGTGTTCGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAG
GCCATCGAGAAAGTGAGGTCCAGCTCCGGCAGGACCAACAAGCCCGTCGT
GATCGCTGATTGCGGTCAATTGTCTTAGATTTGATCATGATA
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