CK935750

Overview
NameCK935750
Unique NameCK935750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length342
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPID_YARLI (Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia lipolytica GN=CPR6 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.222e-21
Identity = 52/106 (49.06%), Postives = 64/106 (60.38%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRS-SSGRTNKPVVIADCGQL 322
            FM Q            ESIYG KF DE F   H  P +LSMANAGP TNGSQFF+ T +T  LD KHVVFG+++ G  +V+ IE+  +    R  +PV I DCG+L
Sbjct:   67 FMVQGGDFTAGNGTGGESIYGEKFPDEAFPYPHDQPFLLSMANAGPNTNGSQFFITTTETPHLDNKHVVFGKLLSGKGIVRQIERTETGEQDRPKQPVTIVDCGEL 172          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIH_USTMA (Peptidyl-prolyl cis-trans isomerase H (Fragment) OS=Ustilago maydis GN=CYP3 PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 2.722e-21
Identity = 52/108 (48.15%), Postives = 66/108 (61.11%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKP---VVIADCGQL 322
            FMCQ             SIYG KF DENF  KH   G+LSMAN+GPGTNG QFF+      +LDGKHVVFG+VV+G+  ++ +E V   +G  N+P   V I  CG++
Sbjct:   51 FMCQGGDFINADGTGSRSIYGDKFDDENFTLKHDKAGLLSMANSGPGTNGCQFFITAQPCPFLDGKHVVFGKVVDGLLTLRKMENV--PTGANNRPKMAVRITQCGEM 156          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPID_CANGA (Peptidyl-prolyl cis-trans isomerase D OS=Candida glabrata GN=CPR6 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.722e-21
Identity = 56/108 (51.85%), Postives = 66/108 (61.11%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKP---VVIADCGQL 322
            FM Q            ESIYG KF DENF  KH  P +LSMANAGP TNGSQ F+    T  LDGKHVVFG+V+EG  +V+ IEK ++  G T+KP   V +  CG L
Sbjct:   69 FMIQFGDFTNFDGTGGESIYGEKFEDENFEIKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIEGKRLVRLIEKQQTEDG-TDKPMHDVKVEGCGLL 175          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPID_YEAST (Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccharomyces cerevisiae GN=CPR6 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.556e-21
Identity = 55/108 (50.93%), Postives = 63/108 (58.33%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKP---VVIADCGQL 322
            FMCQ            ESIY  KF DENF  KH  P +LSMANAGP TNGSQ F+    T  LDGKHVVFG+V++G  +V+ IE  +      NKP   V I DCG L
Sbjct:   69 FMCQFGDFTNFNGTGGESIYDEKFEDENFTVKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIQGKRIVRLIEN-QQCDQENNKPLRDVKIDDCGVL 175          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPID_DICDI (Peptidyl-prolyl cis-trans isomerase D, mitochondrial OS=Dictyostelium discoideum GN=cypD PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.556e-21
Identity = 56/106 (52.83%), Postives = 64/106 (60.38%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSS-SGRTNKPVVIADCGQL 322
            FM Q            ESIYG  F DENF+ KH   G LSMANAG  TNGSQFF+ TA+T  L+G H VFG+VVEG D+VK +E   +  S R     VI DCGQL
Sbjct:   70 FMVQGGDFTHGTGIGGESIYGRTFNDENFLVKHK-IGCLSMANAGKNTNGSQFFITTAETPHLNGGHTVFGEVVEGFDIVKKVENAETDRSDRPKAACVIEDCGQL 174          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPID_KLULA (Peptidyl-prolyl cis-trans isomerase D OS=Kluyveromyces lactis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.644e-21
Identity = 53/106 (50.00%), Postives = 62/106 (58.49%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIE-KVRSSSGRTNKPVVIADCGQL 322
            FMCQ            ESIYG KF DENF  KH  P +LSMANAG  TNGSQ F+    T  LDGKHVVFG+V++G  +V+ IE      + +  K V I DCG L
Sbjct:   71 FMCQFGDFTNFNGTGGESIYGEKFEDENFTLKHDKPFLLSMANAGANTNGSQCFITCVPTPHLDGKHVVFGEVIQGKRLVRTIENNATDEADKPAKEVKIEDCGVL 176          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: CYPB_YEAST (Peptidyl-prolyl cis-trans isomerase B OS=Saccharomyces cerevisiae GN=CPR2 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.644e-21
Identity = 55/106 (51.89%), Postives = 65/106 (61.32%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTA-KTEWLDGKHVVFGQVVEGMDVVKAIEKV-RSSSGRTNKPVVIADCGQ 319
            FM Q            +SIYG  F DENF  KH   G LSMAN G  TNGSQFF+ T  +  WLDGKHVVFGQVV+GMDVV  I+ V R ++ +  + V IA CG+
Sbjct:   93 FMVQGGDFTDGTGVGGKSIYGDTFPDENFTLKHDRKGRLSMANRGKDTNGSQFFITTTEEASWLDGKHVVFGQVVDGMDVVNYIQHVSRDANDKPLEAVKIAKCGE 198          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.065e-21
Identity = 45/86 (52.33%), Postives = 64/86 (74.42%), Query Frame = 2
Query:   68 GSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSS-SGRTNKPVVIADCGQL 322
            G +FADENF++KHTG G+LSMAN+GP +NG QFF+     ++LDGKHVVFG++V+G+  ++ IE V +  + R   PV I +CGQ+
Sbjct:   93 GDRFADENFIEKHTGAGLLSMANSGPNSNGCQFFITCDACDFLDGKHVVFGRLVDGLLTLRKIENVATGPNNRPKLPVKITECGQM 178          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: CYP11_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizopus oryzae GN=cyp11 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.921e-21
Identity = 53/107 (49.53%), Postives = 66/107 (61.68%), Query Frame = 2
Query:    5 GFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIE-KVRSSSGRTNKPVVIADCGQL 322
            GFMCQ            ESIYG+ F DE+F +KH   G+LSMAN GP T  SQFF+ T  T  LDGKHVVFG+VV G +VV+ +E +      R    V+IA+CG+L
Sbjct:   67 GFMCQGGDFTHRTGKGGESIYGANFPDESFSRKHDTHGLLSMANRGPNTQTSQFFITTRPTPHLDGKHVVFGRVVSGYNVVEMMENEPVDDQDRPLHNVMIANCGEL 173          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIH_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizosaccharomyces pombe GN=cyp3 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.765e-20
Identity = 50/108 (46.30%), Postives = 66/108 (61.11%), Query Frame = 2
Query:    5 GFMCQXXXXXXXXXXXXESIYGSK-FADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVR-SSSGRTNKPVVIADCGQL 322
            GFM Q             +I+ S+ F DENF  KH  PG+LSMANAG  +NG QFF+ T   ++LDGKHVVFG+V+EG D+VK IE     ++ R    V I +CG++
Sbjct:   66 GFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAIVECGEM 173          
The following BLAST results are available for this feature:
BLAST of CK935750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
PPID_YARLI1.222e-2149.06Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia ... [more]
PPIH_USTMA2.722e-2148.15Peptidyl-prolyl cis-trans isomerase H (Fragment) O... [more]
PPID_CANGA2.722e-2151.85Peptidyl-prolyl cis-trans isomerase D OS=Candida g... [more]
PPID_YEAST3.556e-2150.93Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccha... [more]
PPID_DICDI3.556e-2152.83Peptidyl-prolyl cis-trans isomerase D, mitochondri... [more]
PPID_KLULA4.644e-2150.00Peptidyl-prolyl cis-trans isomerase D OS=Kluyverom... [more]
CYPB_YEAST4.644e-2151.89Peptidyl-prolyl cis-trans isomerase B OS=Saccharom... [more]
PPIH_RHIOR6.065e-2152.33Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
CYP11_RHIOR7.921e-2149.53Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizo... [more]
PPIH_SCHPO1.765e-2046.30Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_B03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935750 ID=CK935750; Name=CK935750; organism=Citrus sinensis; type=EST; length=342bp
GGGGGGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCG
GAGGCGAATCAATCTACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAG
AAGCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAAC
CAACGGATCTCAGTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATG
GGAAGCACGTTGTGTTCGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAG
GCCATCGAGAAAGTGAGGTCCAGCTCCGGCAGGACCAACAAGCCCGTCGT
GATCGCTGATTGCGGTCAATTGTCTTAGATTTGATCATGATA
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