CK935750

Overview
NameCK935750
Unique NameCK935750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length342
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11875 contig Csv1_Contig11875:259..600. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIF_MOUSE (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Mus musculus GN=Ppif PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.756e-36
Identity = 71/106 (66.98%), Postives = 78/106 (73.58%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQLS 325
            FMCQ             SIYGS+F DENF  KH GPG+LSMANAGP TNGSQFF+CT KT+WLDGKHVVFG V EGMDVVK IE   S SG+T+K +VI DCGQLS
Sbjct:  101 FMCQAGDFTNHNGTGGRSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGKTSKKIVITDCGQLS 206          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIA_RABIT (Peptidyl-prolyl cis-trans isomerase A OS=Oryctolagus cuniculus GN=PPIA PE=2 SV=3)

HSP 1 Score: 150.984 bits (380), Expect = 1.756e-36
Identity = 70/106 (66.04%), Postives = 82/106 (77.36%), Query Frame = 2
Query:    5 GFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQL 322
            GFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM +V+A+E   S +G+T+K + IA+CGQL
Sbjct:   59 GFMCQGGDFTRHNGTGGKSIYGEKFEDENFLLKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGRVKEGMSIVEAMEHFGSENGKTSKKITIANCGQL 164          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 5.111e-36
Identity = 72/106 (67.92%), Postives = 79/106 (74.53%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQLS 325
            FMCQ            ESIYG KF DE FV+K   PG+LSMANAGP TNGSQFF+CT  T WLDGKHVVFGQVVEGMDVVKAIEKV + +G T+K V +ADCGQLS
Sbjct:   67 FMCQGGDFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSMANAGPNTNGSQFFICTVATPWLDGKHVVFGQVVEGMDVVKAIEKVGTRNGSTSKVVKVADCGQLS 172          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: CYP3_CAEEL (Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhabditis elegans GN=cyn-3 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.942e-35
Identity = 71/105 (67.62%), Postives = 79/105 (75.24%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQL 322
            FM Q            ESIYG KF DENF +KHTGPG+LSMANAGP TNGSQFF+CT KTEWLDGKHVVFG+VVEG+DVVKA+E   S SG+  K  +IADCGQL
Sbjct:   67 FMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPVKDCMIADCGQL 171          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 5.650e-35
Identity = 70/106 (66.04%), Postives = 79/106 (74.53%), Query Frame = 2
Query:    5 GFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQL 322
            GFMCQ            ESIYGSKF DENF  KHTGPGILSMAN+GP TNGSQFF+CT KT WLDGKHVVFG+VV+G +VVKA+E V S  G  ++ VVI DCG+L
Sbjct:   66 GFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIA_HEMPU (Peptidyl-prolyl cis-trans isomerase OS=Hemicentrotus pulcherrimus PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.259e-34
Identity = 67/106 (63.21%), Postives = 77/106 (72.64%), Query Frame = 2
Query:    5 GFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQL 322
            GFMCQ            +SIYG KFADENF  KHT PGILSMANAG  TNGSQFF+CTA T WLDGKHVVFG V +G+D++K +E   S SG+T+K + IADCGQL
Sbjct:   59 GFMCQGGDFTRHNGTGGKSIYGEKFADENFTLKHTQPGILSMANAGVNTNGSQFFICTAVTSWLDGKHVVFGAVTQGLDIIKKVESYGSDSGKTSKKITIADCGQL 164          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIA_BLAGE (Peptidyl-prolyl cis-trans isomerase OS=Blattella germanica GN=CYPA PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.147e-34
Identity = 67/105 (63.81%), Postives = 77/105 (73.33%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQL 322
            FMCQ            +SIYG+KF DENF  KHTGPGIL MANAGP TNGSQFF+ TAKT WLD +HVVFG VVEGMDVVK +E + S SG+TNK + + DCGQ+
Sbjct:   60 FMCQGGDFTNHNGTGGKSIYGTKFEDENFQLKHTGPGILWMANAGPNTNGSQFFITTAKTSWLDNRHVVFGSVVEGMDVVKKLESLGSQSGKTNKKIAVVDCGQI 164          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIE_RHIOR (Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus oryzae GN=cyp10 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 4.783e-34
Identity = 68/105 (64.76%), Postives = 78/105 (74.29%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQL 322
            FMCQ            +SIYG KF DENFV KHTGPG LSMANAG  TNGSQFF+CT KT WLDGKHVVFGQVV GM+VV+ +E+  S+SG+ +K VVI DCG+L
Sbjct:  211 FMCQGGDFTKGNGTGGKSIYGGKFEDENFVLKHTGPGTLSMANAGSNTNGSQFFICTEKTTWLDGKHVVFGQVVSGMNVVREMERCGSASGKPSKRVVIVDCGEL 315          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIA_DICDI (Peptidyl-prolyl cis-trans isomerase A OS=Dictyostelium discoideum GN=ppiA PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 4.783e-34
Identity = 70/105 (66.67%), Postives = 76/105 (72.38%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQL 322
            FMCQ            ESIYG+KFADENF  KH G G LSMANAG  TNGSQFF+C A T+WLDGKHVVFG V EGMDVVK +E   S SG+T KPVVIA+CGQL
Sbjct:   75 FMCQGGDFTMGNGTGGESIYGNKFADENFKLKHFGQGTLSMANAGANTNGSQFFICVAPTDWLDGKHVVFGFVTEGMDVVKKMEAAGSQSGKTTKPVVIANCGQL 179          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: CYP7_CAEEL (Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhabditis elegans GN=cyn-7 PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 4.049e-33
Identity = 67/105 (63.81%), Postives = 75/105 (71.43%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQL 322
            FM Q            ESIYG KF DENF +KHTGPG+LSMANAGP TNGSQFF+CT KT WLDGKHVVFG+VVEG+D+V  +E   SSSG      +IADCGQL
Sbjct:   67 FMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTAWLDGKHVVFGRVVEGLDIVSKVEGNGSSSGTPKSECLIADCGQL 171          
The following BLAST results are available for this feature:
BLAST of CK935750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
PPIF_MOUSE1.756e-3666.98Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIA_RABIT1.756e-3666.04Peptidyl-prolyl cis-trans isomerase A OS=Oryctolag... [more]
CYPH_MAIZE5.111e-3667.92Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]
CYP3_CAEEL1.942e-3567.62Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhab... [more]
CP19C_ARATH5.650e-3566.04Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Ara... [more]
PPIA_HEMPU1.259e-3463.21Peptidyl-prolyl cis-trans isomerase OS=Hemicentrot... [more]
PPIA_BLAGE2.147e-3463.81Peptidyl-prolyl cis-trans isomerase OS=Blattella g... [more]
PPIE_RHIOR4.783e-3464.76Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus ... [more]
PPIA_DICDI4.783e-3466.67Peptidyl-prolyl cis-trans isomerase A OS=Dictyoste... [more]
CYP7_CAEEL4.049e-3363.81Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhab... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_B03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935750 ID=CK935750; Name=CK935750; organism=Citrus sinensis; type=EST; length=342bp
GGGGGGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCG
GAGGCGAATCAATCTACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAG
AAGCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAAC
CAACGGATCTCAGTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATG
GGAAGCACGTTGTGTTCGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAG
GCCATCGAGAAAGTGAGGTCCAGCTCCGGCAGGACCAACAAGCCCGTCGT
GATCGCTGATTGCGGTCAATTGTCTTAGATTTGATCATGATA
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