CK935750

Overview
NameCK935750
Unique NameCK935750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length342
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.663e-27
Identity = 60/106 (56.60%), Postives = 70/106 (66.04%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQLS 325
            FM Q            ESIYG+KF DENF  KH  P +LSMANAGPGTNGSQFFV T  T  LDGKHVVFG+V+ G  VV+ IE +++   +  K  VIADCG+LS
Sbjct:   75 FMIQGGDFTAGNGTGGESIYGAKFEDENFQLKHDRPFLLSMANAGPGTNGSQFFVTTVPTPHLDGKHVVFGEVLSGKSVVRQIENLKTQGDKPTKDAVIADCGELS 180          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: CYP5_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizopus oryzae GN=cyp5 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.663e-27
Identity = 58/106 (54.72%), Postives = 68/106 (64.15%), Query Frame = 2
Query:    5 GFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQL 322
            GFM Q            ESIYG KF DENF  KHTG G+LSMANAGP TNGSQFF+   KT WLDG H VFGQ+VEG  V++ +E+  + SG     V I DCG++
Sbjct:   69 GFMAQGGDFTMGNGRGGESIYGHKFNDENFTLKHTGKGVLSMANAGPNTNGSQFFITFDKTPWLDGNHTVFGQLVEGNQVLEILEQHGTQSGMPTAKVEIVDCGEI 174          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIE_DROME (Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster GN=cyp33 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.397e-27
Identity = 56/105 (53.33%), Postives = 69/105 (65.71%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQL 322
            FMCQ            +SIYG KF DENF  KH   G LSMAN+G  TNGSQFF+CT KT+WLD KHVVFG V+ G +VV+ +E+  S SG  ++ +VI  CG+L
Sbjct:  195 FMCQGGDFTNNNGTGGKSIYGKKFNDENFNLKHNSFGTLSMANSGANTNGSQFFICTTKTDWLDNKHVVFGHVISGAEVVRKMERCGSKSGTPSQKIVIYSCGEL 299          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIB_RAT (Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=2 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 7.397e-27
Identity = 58/106 (54.72%), Postives = 72/106 (67.92%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSS-GRTNKPVVIADCGQL 322
            FM Q            +SIYG +F DENF  KH GPG +SMANAG  TNGSQFF+ T KT WLDGKHVVFG+V+EGMDVV+ +E  ++ S  +  K V+I DCG++
Sbjct:  100 FMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVIIVDCGKI 205          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIB_HUMAN (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 9.660e-27
Identity = 58/106 (54.72%), Postives = 73/106 (68.87%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSS-GRTNKPVVIADCGQL 322
            FM Q            +SIYG +F DENF  KH GPG +SMANAG  TNGSQFF+ T KT WLDGKHVVFG+V+EGM+VV+ +E  ++ S  +  K V+IADCG++
Sbjct:  100 FMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKI 205          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.660e-27
Identity = 57/89 (64.04%), Postives = 66/89 (74.16%), Query Frame = 2
Query:   59 SIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSS-GRTNKPVVIADCGQL 322
            SIYG+KF DENF  KHTGPGILSMANAGP TNGSQFF+CT KT WLD KHVVFGQV+EGM +V+ +E   + +     K   I  CG+L
Sbjct:  168 SIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKKGCRIYACGEL 256          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPID_AMAMU (Peptidyl-prolyl cis-trans isomerase D OS=Amanita muscaria GN=Cyp40 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.262e-26
Identity = 61/108 (56.48%), Postives = 72/108 (66.67%), Query Frame = 2
Query:    5 GFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNK-PVVIADCGQLS 325
            GFMCQ            ESIYG KF DE F   H+ P +LSMANAGP TNGSQFF+  + T  LDGKHVVFG+V++G  VV+ IE   +++G   K PVVIADCGQLS
Sbjct:   67 GFMCQGGDFTAGNGTGGESIYGEKFEDEGFPVHHSRPFLLSMANAGPNTNGSQFFITVSATPHLDGKHVVFGEVIKGRSVVRTIENNPATNGDVPKEPVVIADCGQLS 174          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIB_CHICK (Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus GN=PPIB PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.262e-26
Identity = 59/106 (55.66%), Postives = 71/106 (66.98%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSS-GRTNKPVVIADCGQL 322
            FM Q            +SIYG +F DENF  KH GPG +SMANAG  TNGSQFF+ T KT WLDGKHVVFG+V+EGMDVV+ +E  ++ S  +  K V IADCG +
Sbjct:   91 FMIQGGDFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVTIADCGTI 196          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIA2_RHIOR (Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.648e-26
Identity = 58/105 (55.24%), Postives = 68/105 (64.76%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSSGRTNKPVVIADCGQL 322
            FM Q            +SIYG KFADENF  KH+ PG+LSMANAGP TNGSQFF+ T    WLDG HVVFG+V + M++V  IE + S+SG     VVI DCG L
Sbjct:   57 FMLQGGDFTRGDGTGGKSIYGEKFADENFKLKHSEPGLLSMANAGPNTNGSQFFITTVPCSWLDGAHVVFGKVTKNMELVSKIESLGSASGAVKAKVVIEDCGVL 161          
BLAST of CK935750 vs. ExPASy Swiss-Prot
Match: PPIB_BOVIN (Peptidyl-prolyl cis-trans isomerase B OS=Bos taurus GN=PPIB PE=1 SV=4)

HSP 1 Score: 117.472 bits (293), Expect = 2.152e-26
Identity = 58/106 (54.72%), Postives = 71/106 (66.98%), Query Frame = 2
Query:    8 FMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVRSSS-GRTNKPVVIADCGQL 322
            FM Q            +SIYG +F DENF  KH GPG +SMANAG  TNGSQFF+ T KT WLDGKHVVFG+V+EGMDVV+ +E  ++    +  K V IADCG++
Sbjct:  100 FMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVESTKTDGRDKPLKDVTIADCGKI 205          
The following BLAST results are available for this feature:
BLAST of CK935750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
PPID_NEUCR5.663e-2756.6041 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]
CYP5_RHIOR5.663e-2754.72Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizop... [more]
PPIE_DROME7.397e-2753.33Peptidyl-prolyl cis-trans isomerase E OS=Drosophil... [more]
PPIB_RAT7.397e-2754.72Peptidyl-prolyl cis-trans isomerase B OS=Rattus no... [more]
PPIB_HUMAN9.660e-2754.72Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]
CP20C_ARATH9.660e-2764.04Peptidyl-prolyl cis-trans isomerase CYP20-3, chlor... [more]
PPID_AMAMU1.262e-2656.48Peptidyl-prolyl cis-trans isomerase D OS=Amanita m... [more]
PPIB_CHICK1.262e-2655.66Peptidyl-prolyl cis-trans isomerase B OS=Gallus ga... [more]
PPIA2_RHIOR1.648e-2655.24Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus... [more]
PPIB_BOVIN2.152e-2654.72Peptidyl-prolyl cis-trans isomerase B OS=Bos tauru... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_B03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935750 ID=CK935750; Name=CK935750; organism=Citrus sinensis; type=EST; length=342bp
GGGGGGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCG
GAGGCGAATCAATCTACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAG
AAGCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAAC
CAACGGATCTCAGTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATG
GGAAGCACGTTGTGTTCGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAG
GCCATCGAGAAAGTGAGGTCCAGCTCCGGCAGGACCAACAAGCCCGTCGT
GATCGCTGATTGCGGTCAATTGTCTTAGATTTGATCATGATA
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