CK935751

Overview
NameCK935751
Unique NameCK935751
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6120 contig Csv1_Contig6120:343..1219. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935751 vs. ExPASy Swiss-Prot
Match: CP1A1_HUMAN (Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.887e-11
Identity = 44/151 (29.14%), Postives = 77/151 (50.99%), Query Frame = 1
Query:  439 FKDILGNGVKLGAPVTLAEYTPWLRWMFPLEEEKYVEHNERRDKLAKTIMAEHTLARQKGG-----GAAKPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRXMTEADFQNLHY 876
            F +++G+G         A++ P LR++       + + NE+     + ++ EH    +KG       +   H  +  L+     +LSD+ II ++ ++  AG DT T  + W++  L+ NPRVQ+K QEELD V+G +R    +D  +L Y
Sbjct:  224 FGEVVGSG-------NPADFIPILRYLPNPSLNAFKDLNEKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPY 367          
BLAST of CK935751 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.887e-11
Identity = 70/303 (23.10%), Postives = 126/303 (41.58%), Query Frame = 1
Query:    1 GPIMSVWFGSTLNVVISSSELAKQVLKENDQQXXXXXXXXXXXXXXXXGKDLIWADYGPHYVKVRKVSTXXXXXXXXXXALRPIREDEVTAMVESIFRDCTNPEKKGQNMKLRDYLSAVSFNNITRLVLGKRFMSPEGVLNEQGIEFKDILGNGVKLGAPVTLAEYTP--WLRWMFPLEEEKYVEHNERRDKLAKTIMAEHTLARQKGGGAAKPH--FVDALLNLQ------EEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNR-XMTEADFQNLHY 876
            G +M +  G     VISS E A++VL+ +D                   KDL +  YG  + + R+             +   I+E E   +V+ +     +      +  L    +++ F    R+  G+ F   E    ++     +++          T +++ P   L W+      ++   N+   KL    + +H +      G +K H   VD +L++       +   L+ D I GLL N+IIAG+DT  +T+ W M EL +NP + +K Q E+   +G NR  +T+ D   + +
Sbjct:   62 GHVMLLHLGFVPVTVISSREAAEEVLRTHDLDCCSRPNLVGSRLISRGFKDLNFTPYGEEWKERRRFLVGELFCSKKLQSFIYIKEVECNFLVKKLSESAVDQSPVDLSKTLFWLAASILF----RVAFGQSFHESEFTDTDK---IDELVFETETAQGSFTCSDFFPIAGLGWLVDWISGQHKRLNDVFLKL--DALLQHVIDDHSNPGRSKDHKDIVDVMLDVMHKQGKDDSLRLTIDHIKGLLTNIIIAGIDTGALTMIWTMTELARNPEIMKKVQGEIRDRLGNNRERITKEDLDKVPF 355          
BLAST of CK935751 vs. ExPASy Swiss-Prot
Match: CP1A1_SHEEP (Cytochrome P450 1A1 OS=Ovis aries GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 42/134 (31.34%), Postives = 68/134 (50.75%), Query Frame = 1
Query:  490 AEYTPWLRWMFPLEEEKYVEHNERRDKLAKTIMAEHTLARQKGG-----GAAKPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRXMTEADFQNLHY 876
            A++ P LR++     + + + N R     + I+ EH    +KG       +   H  D  L+     +LSD+ II ++ ++  AG DT T  + W++  L+ +PRVQ+K QEELD V+G  R    +D   L Y
Sbjct:  241 ADFIPVLRYLPNTALDLFKDLNRRFYVFVQKIVKEHYKTFEKGHIRDITDSLIEHCQDKRLDENANIQLSDEKIINVVMDLFGAGFDTVTTAISWSLLYLVTSPRVQKKIQEELDTVIGRARWPQLSDRPQLPY 374          
The following BLAST results are available for this feature:
BLAST of CK935751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
CP1A1_HUMAN1.887e-1129.14Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1... [more]
C71BH_ARATH1.887e-1123.10Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
CP1A1_SHEEP9.366e-1131.34Cytochrome P450 1A1 OS=Ovis aries GN=CYP1A1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_B04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_B04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935751 ID=CK935751; Name=CK935751; organism=Citrus sinensis; type=EST; length=877bp
GGGCCTATAATGTCCGTTTGGTTCGGTTCCACTTTAAACGTCGTTATTTC
GAGCTCGGAGTTGGCCAAGCAAGTTCTTAAAGAAAATGATCAACAATTAT
CAAATAGGCGCAGAAGTAGAGCAGCTCTTAGGCTTTCTAGAAATGGAAAA
GACCTTATTTGGGCTGACTATGGTCCTCATTATGTTAAGGTTAGAAAAGT
TTCTACTCTTGAGCTTCTGTCTTCCAAAAAGCTTGAGGCCCTTAGGCCAA
TTAGGGAAGATGAAGTCACTGCCATGGTTGAATCCATCTTTAGAGACTGC
ACTAACCCAGAGAAAAAGGGGCAGAATATGAAACTGAGGGATTACTTGTC
AGCAGTATCATTCAACAACATTACAAGACTTGTTCTTGGAAAGCGATTTA
TGAGCCCAGAAGGTGTACTGAACGAGCAAGGTATTGAGTTCAAGGACATT
CTTGGAAATGGAGTCAAGCTCGGGGCTCCTGTAACATTAGCAGAATACAC
TCCATGGCTAAGATGGATGTTTCCACTAGAGGAAGAGAAATATGTGGAGC
ACAATGAACGCAGAGATAAGCTTGCGAAAACCATAATGGCAGAACATACC
CTTGCTCGTCAAAAGGGTGGAGGAGCTGCTAAGCCACACTTCGTTGATGC
GTTGCTCAATTTGCAAGAGGAATATGAACTTAGTGATGATACAATTATTG
GGCTACTTTGGAACATGATAATAGCAGGCATGGACACCACAACAATAACT
GTAGAATGGGCAATGGCAGAGCTCATAAAAAACCCTAGAGTGCAACAAAA
AGCTCAGGAAGAACTAGACCAAGTAGTAGGCCCTAATCGNNNNATGACAG
AAGCAGACTTTCAAAACCTGCACTATC
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