CK935754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.962e-68 Identity = 126/232 (54.31%), Postives = 158/232 (68.10%), Query Frame = 2 Query: 155 FAGGPWQSAHTTFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGG--WCNPPRPHFDLAMPMFLKLAQCRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK-GANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTG-SDRRTSTSWNVAPANWQFGQTFSGK 838 F W AH TFYG AS TMGGACGYGNLY+ GYG +TAALST LF +G CG C++++C G C G+PAI +TATN CPPN+A+ D GG WCNPPR HFDL+ P F+++A RAGIVPV YRRVPC + GG+RF + G Y+ L V NVAGAGD+ + VK G W+ MS NWG ++Q+ AQL GQALSF+VT + +T + V PA+W FG T+ + Sbjct: 32 FRAMQWTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFKVTSYTTGQTILAAGVTPASWCFGLTYQAR 262
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 3.621e-66 Identity = 123/227 (54.19%), Postives = 149/227 (65.64%), Query Frame = 2 Query: 158 AGGPWQSAHTTFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKC--GGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQCRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFS 832 A W TFYGG+D SGTMGGACGYGNLY Q YG+N AALST LFN+G SCG C+ + C G P WC G AI +T TN+ GGWCN RP+FD++ P + + AGIVP+ Y++V C + GG+RF INGF YF LVLVTN+AG+G IV +SVKG+ T W+ M+RNWG NWQ A L GQALSF VT + +T + PA W FGQTFS Sbjct: 19 ARSDWLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGK-AITVTGTNY-----------GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTFS 233
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 250.751 bits (639), Expect = 8.067e-66 Identity = 115/232 (49.57%), Postives = 155/232 (66.81%), Query Frame = 2 Query: 149 GVFAGGPWQSAHTTFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQCRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNF 844 G A W+SA ++Y +D +GGACG+G+L GYG+ T LSTALF G +CG C+E+KC D ++C PG +I++TATNFC PNF P+D GG CNPP HF L + F K+A +AG++P+ YRRV C + GG+RF + G +F VL++NV GAGD+ V +KG + WLSM RNWGQ W N+ GQ LSF +T SD +T T++NV P W FG+T++GK F Sbjct: 26 GSSALSEWRSAKASYYA-ADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGT-SIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPKEWDFGKTYTGKQF 255
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 8.919e-65 Identity = 116/227 (51.10%), Postives = 158/227 (69.60%), Query Frame = 2 Query: 170 WQSAHTTFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG--GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLA-QCRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQ-WLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGK 838 W AH T+YG +D+ ++GGACGY N Y G+G +TAALS LF +G SCG C++++C DP+WC G A+ +TATNFCP N +N GWCN PR HFD++ P F ++A + GIVPV YRRV C++RGG+RFT+ G FN+V+++NV G G + V+V+G+ + WL M+RNWG NWQS+ L GQ LSF+VT +D +T T NV P++W FGQTFS + Sbjct: 27 WIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRG-AAVTVTATNFCPTN-----NNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSWWFGQTFSSR 247
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 242.662 bits (618), Expect = 2.197e-63 Identity = 119/224 (53.12%), Postives = 147/224 (65.62%), Query Frame = 2 Query: 170 WQSAHTTFYGGSDASGT-MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQCRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGK 838 W A +YG GT + GACGYG+L GYG+ TAALSTALFN+G SCGAC+E+ C +PQ C G+ I ITAT+ CPP A WC P HFDL++PMF+K+AQ +A +VPV YRRVPC K GG++F + G +L NV GAGDI+ VS KG+ T W+ MSR WGQNW +N L GQ++S RVT SD T +V PA+W FGQTF GK Sbjct: 45 WYDARAAYYGDIHGGGTELEGACGYGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGS--IKITATDLCPPGSA-------WCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASWGFGQTFDGK 259
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.574e-61 Identity = 107/227 (47.14%), Postives = 150/227 (66.08%), Query Frame = 2 Query: 170 WQSAHTTFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQCRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNF 844 W+ A T D S ++ GGACGYG+L + +A LS LFN G SCGAC E++C +WC G+P++++TAT+FCPPN SD GGWCN P+ H +L+ F +A+ RA ++P+ YRRV C +RGG+RF+++G +F VL++NV G++V V VKG T W+ M+RNWGQNW S+ L+GQ+LSF VT +T S++VAP W+FG T+ GK F Sbjct: 28 WKIATATLSRDRDGSSSVATGGACGYGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIASYDVAPPYWRFGMTYQGKQF 254
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 2.686e-61 Identity = 107/207 (51.69%), Postives = 139/207 (67.15%), Query Frame = 2 Query: 224 GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQCRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNF 844 GGACGYG+L YG TA +S ALF G +CG C+E++C WC G+P +++TAT+FC PN D GGWCN P+ HF+++ FL++A+ +A IVPV +RRV C + GG+RFTI G F VL+TNVA G++ V VKG+ T W+ M RNWGQNWQ +A L GQ LSF VTG RT +++VAP +W F QTF GK F Sbjct: 52 GGACGYGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPPDWMFAQTFEGKQF 258
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.291e-55 Identity = 115/240 (47.92%), Postives = 152/240 (63.33%), Query Frame = 2 Query: 137 AKIPGVFAG----GPWQSAHTTFYGGSDASGTM-GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQCRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGA-NTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGK 838 AK+P V G GPW H TFYGG DASGT GGACGY + + GYG TAA+S ALF+NG CGAC+ELK GD +++TATN PP NG HFDL MP FL +A+ + G+VPVSYR+V C ++GGI++TI G +N+V+V NV GAGD+V+++VKG +W + R+WGQ W++ A L G++L+FRV D R +TSW VAP +W + T+ K Sbjct: 67 AKMPHVNHGRYKCGPWVDGHATFYGGRDASGTTEGGACGYKD--ADGYGAMTAAVSPALFDNGAGCGACYELK--GD------SGKTVVVTATNQAPPPV-----NG----MKGEHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDWTYDNTYQAK 287
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 9.251e-54 Identity = 108/231 (46.75%), Postives = 136/231 (58.87%), Query Frame = 2 Query: 170 WQSAHTTFYGGSDASGT-MGGACGY-GNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQCRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK--GANTQWLSMSRNWGQNWQSNAQL---VGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKN 841 W TFYG G GGACGY N Y TAALST LF +G CG C+EL+C P WCNPG+P+++IT TN CPPN+ P+D+GGWCNPPR HFD+A P FLKLAQ AGIVPV YRRVPC++ GG+RF + G Y+ L+ V NV GAGD+ +SVK G W+ + NWG +Q A L G + + ++T + W G + G N Sbjct: 52 WHDGSATFYGDPSGMGDDFGGACGYVSNDIVSLYSTKTAALSTPLFADGNGCGQCYELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQVFAALDNSDGLTVKLTTYSTPQQTIIVSDAISPWWITGLCYQGSN 281
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.139e-27 Identity = 83/245 (33.88%), Postives = 123/245 (50.20%), Query Frame = 2 Query: 170 WQSAHTTFYGGSDASGTMGGACGY-GNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------CRAGIVPVSYRRVPCRKRG---GIRFTINGFRYFNLVLVTNVAGAGDIVRVSV-----KGANTQWLSMSRNWGQNWQSNA--QLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTF-SGKNFR 847 W T+YG ++ SGT GGACGY G++ + AA S +++ +G CG+C+++KC G+P C+ G P + + T+ CP GG C HFDL+ F +A+ AG +PV Y RVPC+ +G R +Y+ VLV + G GD+ V + G W +M ++WG W+ N+ + +S R+T RT + NV PA WQ G T+ S NFR Sbjct: 38 WSIGGATWYGPANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPS-CS-GKP-VTVVLTDLCP---------GGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWKYNSGPAPLQAPMSIRLTSGSGRTLVASNVIPAGWQPGGTYRSIVNFR 270 The following BLAST results are available for this feature:
BLAST of CK935754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 96
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935754 ID=CK935754; Name=CK935754; organism=Citrus sinensis; type=EST; length=895bpback to top |