CK935754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 2.805e-26 Identity = 81/236 (34.32%), Postives = 123/236 (52.12%), Query Frame = 2 Query: 170 WQSAHTTFYGGSDASGTMGGACGY-GNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLA------QCR-AGIVPVSYRRVPCRKRGGIRFTI-----NGFRYFNLVLVTNVAGAGDI--VRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQA-LSFRVTGSDRRTSTSWNVAPANWQFGQTF 829 W + T+YG ++ +G+ GGACGY G ++ + AA S +++ +GL CG+C+++KC G+ C+ GNP + + T+ CP GG C HFDL+ F +A Q R AG++ + Y RVPC GG++ T + YF VLV G GD+ V + GA W M ++WG W+ NA QA S R+T S +T + NV P+ W+ G ++ Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSA-CS-GNP-VTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVKLTFVVDVGSNPNYF-AVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLNAGSALQAPFSIRLTSSSGKTLVASNVIPSGWKPGMSY 258
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.392e-25 Identity = 74/238 (31.09%), Postives = 114/238 (47.90%), Query Frame = 2 Query: 161 GGPWQSAHTTFYGGSDASGTMGGACGYGNLYSQ-GYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------CRAGIVPVSYRRVPCRKRGGIRFTINGFR--YFNLVLVTNVAGAGDIVRVSVKGA--NTQWLSMSRNWGQNWQSNAQL---VGQALSFRVTGSDRRTSTSWNVAPANWQFGQTF 829 G W S T+YGG G+ GGACGY + Q + AA +LF NG CG+C+++KC G+ + C+ G P + + T+ CP GG C HFD++ F +A AG++ + Y+RVPCR + F ++ Y+ +LV G GD+ V + A W +M ++WG W+ N+ + S R+T + + NV P+ WQ G T+ Sbjct: 42 GYGWSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGN-RACS-GRP-VTVVITDSCP---------GGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWGATWRLNSNTGKPLSPPFSIRLTSGSGKVLVANNVIPSGWQAGLTY 267
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 9.023e-25 Identity = 80/237 (33.76%), Postives = 122/237 (51.48%), Query Frame = 2 Query: 170 WQSAHTTFYGGSDASGTMGGACGYGNLYSQG-YGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLA------QCR-AGIVPVSYRRVPCRKRGGIRFTI-----NGFRYFNLVLVTNVAGAGDIVRVSV--KGANTQWLSMSRNWGQNWQSNAQLVGQA-LSFRVTGSDRRTSTSWNVAPANWQFGQTFS 832 W + T+YG ++ +G+ GGACGY Q + AA S +++ +GL CG+C+++KC G+ C+ GNP + + T+ CP GG C HFDL+ F +A Q R AG++ + Y RVPC GG+ T + YF VLV G GD+ + + GA W M ++WG W+ +A QA LS R+T S +T + NV P+ W+ G +++ Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSA-CS-GNP-VTVVLTDECP---------GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVMLTFAVDAGSNPSYF-AVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWGAVWKLSAGAALQAPLSIRLTSSSGKTLVASNVIPSGWKPGASYT 259
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.429e-24 Identity = 85/245 (34.69%), Postives = 119/245 (48.57%), Query Frame = 2 Query: 146 PGVFAGGPWQSAHTTFYGGSDASGTMGGACGYGNLYSQ-GYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------CRAGIVPVSYRRVPCRKRG-GIRFTI----NGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQAL----SFRVTGSDRRTSTSWNVAPANWQFGQTF 829 P V W +A T+YG + G+ GGACGY Q + AA S +L+ G CGAC+E+KC + C+ G PA ++ T+ CP GG C HFD++ +A+ AGI+ V YRRVPC+ G I F + N F YF VL+ G GD+ V + A W M +NWG W+ N+ G+AL S R+T + + NV PA+W+ G T+ Sbjct: 56 PSVTVTTGWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCTTNAA-CS-GQPATVV-ITDECP---------GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPF-YFE-VLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWGALWRYNSN-TGKALKAPFSLRLTSDSGKVLVANNVIPASWKPGVTY 285
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXB17_ORYSJ (Expansin-B17 OS=Oryza sativa subsp. japonica GN=EXPB17 PE=3 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.441e-22 Identity = 77/236 (32.63%), Postives = 114/236 (48.31%), Query Frame = 2 Query: 170 WQSAHTTFYGGSDASGTMGGACGYGNLYS-QGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQCRA-------GIVPVSYRRVPCRKRG-GIRFTIN--GFRYFNLVLVTNVAGAGDIVRVSVKGANT-QWLSMSRNWGQNW-QSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGK 838 W+ A T+YG ++ G+ GGACGYG+L ++S LF +G CGAC+++KC D C+ A+ + T+ CP GG C R HFDL+ F ++A A G + V YRR C+ G I F +N ++ +LV G GDI + +K AN+ +WL M WG W LVG T S ++ T+ +V P NW+ T++ + Sbjct: 48 WRPATATWYGDAEGDGSTGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKVKC-LDHGICS--RRAVTVIVTDECP---------GGLCAFGRTHFDLSGAAFSRMAVAGAGGHLRDRGQLSVVYRRTACKYGGKNIAFRVNEGSTNFWLSLLVEFEDGQGDIGSMQIKQANSVEWLDMKHVWGATWCLVRGPLVGPFSVRLTTLSAQKALTARDVIPRNWKPTATYTSR 271
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXB16_ORYSJ (Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.441e-22 Identity = 78/236 (33.05%), Postives = 110/236 (46.61%), Query Frame = 2 Query: 170 WQSAHTTFYGGSDASGTMGGACGYGNLYS-QGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQC-------RAGIVPVSYRRVPCRKRG-GIRFTIN--GFRYFNLVLVTNVAGAGDIVRVSVKGANT-QWLSMSRNWGQNWQ-SNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGK 838 W A T+YG +D G+ GGACGYG L A+S LF G CGAC++++C D C+ A+ + T+ CP GG C R HFDL+ F +LA G + V YRR C+ G I F +N ++ +LV G GDI + +K AN+ QW M WG W + LVG T + R+T ++ +V P NW T++ + Sbjct: 45 WHPATATWYGSADGDGSDGGACGYGTLVDVVPMKTRVGAVSPVLFKGGEGCGACYKVRC-LDASICS--RRAVTVIVTDECP---------GGVCAFGRTHFDLSGAAFARLAVAGHGGQLQNRGEISVVYRRTACKYGGKNIAFHVNEGSTTFWLSLLVEFEDGDGDIGSMQLKQANSAQWQDMKHIWGATWSLTPGPLVGPFSVRLTTLTTRQTLSAQDVIPKNWTPKATYTSR 268
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXPB3_ARATH (Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 1.220e-21 Identity = 74/236 (31.36%), Postives = 112/236 (47.46%), Query Frame = 2 Query: 170 WQSAHTTFYGGSDASGTMGGACGYGNLYS-QGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQC-------RAGIVPVSYRRVPCRKRG-GIRFTIN--GFRYFNLVLVTNVAGAGDIVRVSVKGANT-QWLSMSRNWGQNWQSNAQLVGQALSFRVTG-SDRRTSTSWNVAPANWQFGQTFSGK 838 W A T+YG + G+ GGACGYG L + A++ LF NG CGAC++++C D C+ A+ + T+ CP C+ HFDL+ +F +LA G++PV YRR C+ RG I F +N ++ +LV G GDI + ++ A +WL M WG NW + S ++T S +T ++ +V P NW T+S + Sbjct: 36 WLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKVRC-LDKSICS--RRAVTVIITDECP-----------GCSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYSSR 257
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXPB2_ARATH (Putative expansin-B2 OS=Arabidopsis thaliana GN=EXPB2 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 2.080e-21 Identity = 83/241 (34.44%), Postives = 121/241 (50.21%), Query Frame = 2 Query: 170 WQSAHTTFYGGSDASGTMGGACGYGNLYSQ-GYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLA------QCR-AGIVPVSYRRVPCRKRG-GIRFTINGFRYFN--LVLVTNVAGAGDIVRVSVKGA--NTQWLSMSRNWGQNWQSNAQLVGQA-LSFRVTGSDR-RTSTSWNVAPANWQFGQTF-SGKNF 844 W A +T+YG G+ GGACGYGN +Q + +A +LF +G CGAC+++KC C+ NP + + T+ CP C HFDL+ F +A Q R G + + Y++V C G + F ++ N VLV V G G+I R+ +K A + +WLSMS++WG W+ + +A LS RVT + +T + NV PANWQ G + S NF Sbjct: 47 WSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSA-CSK-NP-VTVVITDECP-----------GCVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXPB1_ARATH (Expansin-B1 OS=Arabidopsis thaliana GN=EXPB1 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.124e-20 Identity = 72/236 (30.51%), Postives = 113/236 (47.88%), Query Frame = 2 Query: 170 WQSAHTTFYGGSDASGTMGGACGYGNLYS-QGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLA-------QCRAGIVPVSYRRVPCRKRG-GIRFTIN--GFRYFNLVLVTNVAGAGDIVRVSVKGANT-QWLSMSRNWGQNW-QSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGK 838 W A T+YG ++ G+ GGACGYG+L + + A+S LF G CGAC++++C D C+ A+ I AT+ P +G HFDL+ F +A G++ + YRR C+ RG I F +N Y+ +L+ G GDI + ++ A + +W+SM WG NW L G T S+ +T ++ +V P+NW T++ + Sbjct: 40 WLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRC-LDKTICS--KRAVTIIATDQSP--------SGPSAKAKHTHFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANWCIVEGPLKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYTSR 264
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.740e-20 Identity = 73/249 (29.32%), Postives = 114/249 (45.78%), Query Frame = 2 Query: 161 GGPWQSAHTTFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------CRAGIVPVSYRRVPCRKRG-GIRFTI--NGFRYFNLVLVTNVAGAGDIVRV----------SVKGANT-QWLSMSRNWGQNWQ--SNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFS 832 GG W +A T+YG + +G GGACG+ N+ + T+ + LF +G CG+C++++C G P C+ ++IT N+ P + HFDL+ F +A+ AGI+ + +RRVPC+ G + F + + +LV G GD+V+V V G T W M +WG W+ +N L G S R+T +T + V PA+WQ +S Sbjct: 89 GGGWLNARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPA-CSGLPETVIITDMNYYPVSLY--------------HFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDLMESRYSTGGVDGTPTGVWTPMRESWGSIWRLDTNHPLQG-PFSLRITNESGKTLIADQVIPADWQPNTVYS 321 The following BLAST results are available for this feature:
BLAST of CK935754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 96
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935754 ID=CK935754; Name=CK935754; organism=Citrus sinensis; type=EST; length=895bpback to top |