CK935754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXLA1_ARATH (Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12 Identity = 60/220 (27.27%), Postives = 104/220 (47.27%), Query Frame = 2 Query: 203 SDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMF-LKLAQCRAGIVPVSYRRVPC---RKRGGIRFTINGFR--YFNLVLVTNVAGAGDIVRVSVK--GANTQWLSMSRNWGQNWQSNAQLVGQALSFR--VTGS-DRRTSTSWNVAPANWQFGQTF 829 S AS GAC YG++ + + + AA +++ +G CGACF+++C +P+ C+ ++IT N S+ R +A P+ + GIV + Y+RVPC K +R + Y + L+ G ++V + + G++ W M+R+ G W ++ G A+ FR VTG D + S +V P+NW+ G+ + Sbjct: 34 SSASALSSGACAYGSMATSFFAGHIAAAIPSIYKDGAGCGACFQVRC-KNPKLCSTKGTIVMITDLN--------KSNQTDLVLSSRAFRAMAKPIVGADKDLLKQGIVDIEYQRVPCDYGNKNMNVRVEEASKKPNYLEIKLLYQ-GGQTEVVSIDIAQVGSSPNWGYMTRSHGAVWVTDKVPTG-AIQFRFVVTGGYDGKMIWSQSVLPSNWEAGKIY 242
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXLB1_ARATH (Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.765e-12 Identity = 63/228 (27.63%), Postives = 98/228 (42.98%), Query Frame = 2 Query: 176 SAHTTFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQCRAGIVPVSYRRVPCRKRG-GIRFTINGFRY---FNLVLVTNVAGAGDIVRVSVKGAN-TQWLSMSRNWGQ-NWQSNAQLVGQALSFRVTGSDRRTSTSW----NVAPANWQFGQTF 829 ++ T+YG D G CGYG + +S L+NNG CGAC++++C P G + + AT+ + D + P+ + +A P + G+V V Y+R+PCR G + + I+ Y + +LV V G DI+ V V + +W M R +G + N L F V GS +W N PA+W G T+ Sbjct: 29 NSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQVRCKIPPHCSEEG---VYVVATD------SGEGDGTDFILSPKAYGRMARP-GTENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCKEWRRMRRVFGAVHDLQNPPRGTLTLRFLVYGS---AGINWIQSPNAIPADWTAGATY 243
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXPB5_ARATH (Expansin-B5 OS=Arabidopsis thaliana GN=EXPB5 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 3.011e-12 Identity = 66/241 (27.39%), Postives = 97/241 (40.25%), Query Frame = 2 Query: 170 WQSAHTTFYGGSDASGTMGGACGYGNLYSQ-GYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------CRAGIVPVSYRRVPCRKRG---GIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQ-SNAQLVGQALSFRVTGS-DRRTSTSWNVAPANWQFGQTFSGK-NFRV 850 W +A T+YG + GT GGACGYG+ ++ Y +A +LF +G CGAC+ LKC D C ++I SD C HFDL+ F LA+ G + VSY+R C+ I Y+ V G G+ + V+ A Q++ M W+ S + + R+T + + + V P W G + K NF V Sbjct: 34 WNTAGITWYGDREGPGTTGGACGYGDAVAKHPYRCMVSAGGPSLFKDGKGCGACYRLKC--DHPLCTKKPIKVMI-------------SDECPGCTKESVHFDLSGKAFGALAKRGKGDQLRNLGELKVSYKRACCKHPKTMIAIHVDAGANPYYMSFAVKFANGDGNFACIEVQPAGGQYMKMEEMRSAVWRLSPGVPLKGPFNIRLTSAVSGKKIIAKGVIPEKWSPGAIYHSKVNFPV 259
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXLA2_ARATH (Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.011e-12 Identity = 57/219 (26.03%), Postives = 103/219 (47.03%), Query Frame = 2 Query: 203 SDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMF-LKLAQCRAGIVPVSYRRVPC---RKRGGIRF--TINGFRYFNLVLVTNVAGAGDIVRVSV-KGANTQWLSMSRNWGQNWQSNAQLVGQALSFR---VTGSDRRTSTSWNVAPANWQFGQTF 829 S AS GAC YG++ + + + AA +++ +G CGACF+++C +P C+ +++T N ++ R +A P+ + GIV + YRRVPC K+ +R + Y + L+ G ++V + + + ++ W M+R+ G W ++ ++ AL FR G D + S V PANW+ G+++ Sbjct: 35 SSASALSSGACAYGSMATGFFAGHIAAALPSIYKDGSGCGACFQVRC-KNPTLCSSKGTTVIVTDLN--------KTNQTDLVLSSRAFRAMAKPVVGADRDLLKQGIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQ-GGQTEVVAIYIAQVGSSHWSYMTRSHGAVWVTD-KVPNGALQFRFVVTAGYDGKMVWSQRVLPANWEAGKSY 242
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXLA2_ORYSJ (Expansin-like A2 OS=Oryza sativa subsp. japonica GN=EXLA2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.760e-12 Identity = 63/212 (29.72%), Postives = 95/212 (44.81%), Query Frame = 2 Query: 227 GACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMP-MFLKLAQCRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNV-----AGAGDIVRVSVKG-ANTQWLSMSRNWGQNWQSNAQLVGQALSFRVT---GSDRR-TSTSWNVAPANWQFGQTF 829 G+CGYG+L + G + AA S ALF G+ CGACF+++C D + C+ +++T + A+ ++ + +A P M +L RA V V Y+RVPC G +I ++ G DIV V V ++ W M+R++G W S AQ L FRV G D + V P W G+ + Sbjct: 52 GSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRC-KDGKLCSTAGAKVVVT-------DEARSTNRTDLVLSAAAYAAMARPGMAAQLRTRRA--VDVEYKRVPCEYAAGRNLSIRVEEKSRPPRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRDYGPAW-STAQAPAGPLQFRVVVTGGYDGKWVWADGEVLPRRWTAGRVY 252
BLAST of CK935754 vs. ExPASy Swiss-Prot
Match: EXLB1_ORYSJ (Expansin-like B1 OS=Oryza sativa subsp. japonica GN=EXLB1 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.329e-11 Identity = 62/228 (27.19%), Postives = 94/228 (41.23%), Query Frame = 2 Query: 179 AHTTFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQCRAGIVPVSYRRVPCR-KRGGIRFTINGFRYFNLVLVTNV---AGAGDIVRVSV-KGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSD--RRTSTSW----NVAPANWQFGQTF 829 + +Y SD GT GAC YG + + S +L+ +G+ CGAC++++C +P +C+P I+IT + SD + +A A G+V + YRRV C I F I F L + G DI+ V + + N +SR G W + + G LS R+ S R +W N+ P NW G T+ Sbjct: 31 SRAAYYPNSDIKGTENGACEYG-AFGATLNNGDVSASASLYRDGVGCGACYQVRC-TNPYYCSPNGVTIVITDSG--------ASDGTDFILSQHAFTRMAQSTDAGTALLTLGVVGIEYRRVSCTYPNKNIVFKITESSNFPNYLEFEIWYQQGNQDIIAVQLCETVNLTCQLLSRTHGAVWAAVSPPSG-PLSIRMLFSSGAPRGGDTWLVPTNIVPQNWTAGATY 247 The following BLAST results are available for this feature:
BLAST of CK935754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 96
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935754 ID=CK935754; Name=CK935754; organism=Citrus sinensis; type=EST; length=895bpback to top |