CK935759
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_BDEBA (Glycine dehydrogenase [decarboxylating] OS=Bdellovibrio bacteriovorus GN=gcvP PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 3.898e-56 Identity = 104/180 (57.78%), Postives = 137/180 (76.11%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLM 540 LP H +V G + + +APWGSA ILPIS+ YI MMG++GL +A+ ++IL+ANY+AK+LE HYP+L++G NG VAHE IVD+R +K T+GI+ DVAKRLMD+GFH PTMS+PV GTLMIEPTESESK+ELDR+ +++++IR+EIA +E GK D NN LK APH +LM Sbjct: 731 LPKHSLVPEAG-----PANGISATTSAPWGSASILPISWAYITMMGAQGLRKATLVSILSANYIAKKLEAHYPVLYKGKNGLVAHECIVDVREIKKTSGIDVTDVAKRLMDFGFHAPTMSFPVAGTLMIEPTESESKKELDRFIESMVTIRKEIAAVETGKMDKENNALKNAPHTAQMLM 905
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_PSEFS (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas fluorescens (strain SBW25) GN=gcvP PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 8.685e-56 Identity = 108/178 (60.67%), Postives = 138/178 (77.53%), Query Frame = 1 Query: 7 SHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLM 540 SH G A E+ + G + AAP+GSA ILPI++ YI+MMG GL AS++AILNANY+++RLE+HYP+L+ G NG VAHE I+DLR LK+++GI +DVAKRL+D+GFH PTMS+PV GTLMIEPTESESKEELDR+CDA+I+IREEI +ENG D +N LK APH + L+ Sbjct: 720 SHLTPFLPGHAAMERKE--GAVCAAPFGSASILPITWMYISMMGGAGLKRASQLAILNANYISRRLEEHYPVLYTGSNGLVAHECILDLRPLKDSSGISVDDVAKRLIDFGFHAPTMSFPVAGTLMIEPTESESKEELDRFCDAMIAIREEIRAVENGTLDKDDNPLKNAPHTAAELV 895
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_HAHCH (Glycine dehydrogenase [decarboxylating] OS=Hahella chejuensis (strain KCTC 2396) GN=gcvP PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 1.935e-55 Identity = 102/154 (66.23%), Postives = 127/154 (82.47%), Query Frame = 1 Query: 61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPH 522 + I+AAPWGSA ILPIS+TYI MMG +GLTEA+K AILNANY+AKRLE HYP+L+ G G VAHE I+D+R K++ G+ +D+AKRL+D+GFH PTMS+PVPGTLMIEPTESES ELDR+CDA+I+IREEI IENG+ D+ ++ L APH Sbjct: 749 IAPISAAPWGSAGILPISWTYIRMMGGEGLTEATKSAILNANYIAKRLEPHYPVLYTGSQGFVAHECIIDVRPFKDSCGVTVDDIAKRLIDFGFHAPTMSFPVPGTLMIEPTESESLAELDRFCDAMIAIREEIRAIENGEYDVDHSPLHHAPH 902
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_BURM1 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=gcvP PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 2.527e-55 Identity = 102/159 (64.15%), Postives = 131/159 (82.39%), Query Frame = 1 Query: 61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLL 537 +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL HYP+L+ G G VAHE I+DLR +K ++GI +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESESKEELDR+ DA+I+IR+EI +E G+AD +N L+ APH +++ Sbjct: 764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKESSGITVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKEELDRFIDAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVV 922
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP1_PSEF5 (Glycine dehydrogenase [decarboxylating] 1 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=gcvP1 PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 2.527e-55 Identity = 103/159 (64.78%), Postives = 130/159 (81.76%), Query Frame = 1 Query: 64 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLM 540 G + AAP+GSA ILPI++ YI+MMG GL AS++AILNANY+++RLE+HYP+L+ G NG VAHE I+DLR LK+++GI +DVAKRL+D+GFH PTMS+PV GTLMIEPTESESKEELDR+CDA+I IREEI +ENG D +N LK APH + L+ Sbjct: 740 GAVCAAPFGSASILPITWMYISMMGGAGLKRASQLAILNANYISRRLEEHYPVLYTGSNGLVAHECILDLRPLKDSSGISVDDVAKRLIDFGFHAPTMSFPVAGTLMIEPTESESKEELDRFCDAMIRIREEIRAVENGALDKDDNPLKNAPHTAAELV 898
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP1_PSEPF (Glycine dehydrogenase [decarboxylating] 1 OS=Pseudomonas fluorescens (strain Pf0-1) GN=gcvP1 PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 4.310e-55 Identity = 103/159 (64.78%), Postives = 129/159 (81.13%), Query Frame = 1 Query: 64 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLM 540 G + AAP+GSA ILPI++ YI MMG GL AS++AILNANY+++RLE+HYP+L+ G NG VAHE I+DLR LK+++GI +DVAKRL+D+GFH PTMS+PV GTLMIEPTESESKEELDR+CDA+I IREEI +ENG D +N LK APH + L+ Sbjct: 741 GAVCAAPFGSASILPITWMYIRMMGGAGLKRASQLAILNANYISRRLEEHYPVLYTGSNGLVAHECILDLRPLKDSSGISVDDVAKRLIDFGFHAPTMSFPVAGTLMIEPTESESKEELDRFCDAMIRIREEIRAVENGTLDKDDNPLKNAPHTAAELV 899
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_PSE14 (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=gcvP PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 5.629e-55 Identity = 100/153 (65.36%), Postives = 127/153 (83.01%), Query Frame = 1 Query: 64 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPH 522 G + AAP+GSA ILPI++ YI MMG +GL AS++AILNANY+++RLE+HYP+L+ G NG VAHE I+DLR +K+++GI +DVAKRL+D+GFH PTMS+PV GTLMIEPTESES+EELDR+CDA+I IREEI +ENG D +N LK APH Sbjct: 743 GAVCAAPFGSASILPITWMYIRMMGGEGLKRASQLAILNANYISRRLEEHYPVLYTGTNGLVAHECILDLRPIKDSSGISVDDVAKRLIDFGFHAPTMSFPVAGTLMIEPTESESREELDRFCDAMIKIREEIRAVENGTLDKDDNPLKNAPH 895
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_BURCM (Glycine dehydrogenase [decarboxylating] OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=gcvP PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 7.352e-55 Identity = 102/159 (64.15%), Postives = 130/159 (81.76%), Query Frame = 1 Query: 61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLL 537 +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL HYP+L+ G G VAHE I+DLR +K T+GI +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+ A+I+IREEI +E G+AD +N L+ APH +++ Sbjct: 764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKETSGISVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFIAAMIAIREEIRAVEEGRADREDNPLRHAPHTAAVV 922
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_BURCJ (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=gcvP PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 7.352e-55 Identity = 102/159 (64.15%), Postives = 130/159 (81.76%), Query Frame = 1 Query: 61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLL 537 +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL HYP+L+ G G VAHE I+DLR +K T+GI +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+ A+I+IREEI +E G+AD +N L+ APH +++ Sbjct: 764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKETSGISVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFIAAMIAIREEIRAVEEGRADREDNPLRHAPHTAAVV 922
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_BURCH (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cenocepacia (strain HI2424) GN=gcvP PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 7.352e-55 Identity = 102/159 (64.15%), Postives = 130/159 (81.76%), Query Frame = 1 Query: 61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLL 537 +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL HYP+L+ G G VAHE I+DLR +K T+GI +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+ A+I+IREEI +E G+AD +N L+ APH +++ Sbjct: 764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKETSGISVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFIAAMIAIREEIRAVEEGRADREDNPLRHAPHTAAVV 922 The following BLAST results are available for this feature:
BLAST of CK935759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 368
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935759 ID=CK935759; Name=CK935759; organism=Citrus sinensis; type=EST; length=541bpback to top |