CK935759
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_BURPP (Glycine dehydrogenase [decarboxylating] OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=gcvP PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 1.638e-54 Identity = 104/174 (59.77%), Postives = 137/174 (78.74%), Query Frame = 1 Query: 19 VSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLM 540 +S+G AP +G ++ AP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AK+L HYP+L+ G G VAHE I+DLR +K T+GI +DVAKRL DYGFH PTMS+PVPGTLM+EPTESESKEELDR+ +A+I+IREEI +E+G++D +N LK APH ++++ Sbjct: 756 ISSGYERAPNG---IGAVSGAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYVAKKLAPHYPVLYSGPGGLVAHECILDLRPIKETSGITVDDVAKRLADYGFHAPTMSFPVPGTLMVEPTESESKEELDRFIEAMIAIREEIRAVEDGRSDREDNPLKHAPHTAAVVI 926
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_PSESM (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas syringae pv. tomato GN=gcvP PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 2.139e-54 Identity = 99/153 (64.71%), Postives = 127/153 (83.01%), Query Frame = 1 Query: 64 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPH 522 G + AAP+GSA ILPI++ YI MMG +GL AS++AILNANY+++RLE+HYP+L+ G NG VAHE I+DLR +K+++GI +DVAKRL+D+GFH PTMS+PV GTLMIEPTESES+EELDR+CDA+I IREEI +E+G D +N LK APH Sbjct: 743 GAVCAAPFGSASILPITWMYIRMMGGEGLKRASQLAILNANYISRRLEEHYPVLYTGTNGLVAHECILDLRPIKDSSGISVDDVAKRLIDFGFHAPTMSFPVAGTLMIEPTESESREELDRFCDAMIKIREEIRAVEDGTLDKDDNPLKNAPH 895
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_BURXL (Glycine dehydrogenase [decarboxylating] OS=Burkholderia xenovorans (strain LB400) GN=gcvP PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 2.139e-54 Identity = 104/174 (59.77%), Postives = 136/174 (78.16%), Query Frame = 1 Query: 19 VSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLM 540 +S+G AP +G ++ AP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AK+L HYP+L+ G G VAHE I+DLR +K T+GI +DVAKRL DYGFH PTMS+PVPGTLM+EPTESESKEELDR+ +A+I+IREEI +E G++D +N LK APH ++++ Sbjct: 756 ISSGYERAPNG---IGAVSGAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYVAKKLAPHYPVLYSGPGGLVAHECILDLRPIKETSGITVDDVAKRLADYGFHAPTMSFPVPGTLMVEPTESESKEELDRFIEAMIAIREEIRAVEEGRSDREDNPLKHAPHTAAVVI 926
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_BURCC (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cenocepacia (strain MC0-3) GN=gcvP PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 2.139e-54 Identity = 101/159 (63.52%), Postives = 130/159 (81.76%), Query Frame = 1 Query: 61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLL 537 +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL HYP+L+ G G VAHE I+DLR +K ++GI +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+ A+I+IREEI +E G+AD +N L+ APH +++ Sbjct: 764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKESSGISVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFIAAMIAIREEIRAVEEGRADREDNPLRHAPHTAAVV 922
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_NITHX (Glycine dehydrogenase [decarboxylating] OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=gcvP PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 2.794e-54 Identity = 102/174 (58.62%), Postives = 131/174 (75.29%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPH 522 LP HP PA +G ++AAP+GSA IL ISY Y+ MMG +GLT A+++AILNANY+A+RL+ H+P+L+R V G VAHE I+D R LK G+ +D+AKRL+DYGFH PTMS+PVPGTLMIEPTESESK ELDR+CDA+I+IR EIA+IE G+ + + L+ APH Sbjct: 729 LPGHPATDGATPPA------VGAVSAAPFGSASILTISYIYVLMMGGEGLTRATEVAILNANYVAQRLDPHFPVLYRNVKGRVAHECIIDPRALKAETGVTVDDIAKRLIDYGFHAPTMSFPVPGTLMIEPTESESKAELDRFCDAMIAIRREIAEIEAGRWSVEASPLRHAPH 896
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_LEPBL (Glycine dehydrogenase [decarboxylating] OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=gcvP PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 3.649e-54 Identity = 100/157 (63.69%), Postives = 129/157 (82.17%), Query Frame = 1 Query: 64 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSL 534 G ++AAPWGSA I+ IS+ YIA+MGS+GLT A++I+ILNANY+AKRLEK YP+L++G NG VAHE I+D+R K +A IE EDVAKRL+DYGFH PTMS+PVPGTLMIEPTESES EELDR+C+A++ I +EI ++NG D +N LK +PH ++ Sbjct: 754 GAVSAAPWGSASIVLISWIYIALMGSEGLTNATRISILNANYIAKRLEKAYPVLYKGKNGFVAHECILDVRPFKKSAEIEVEDVAKRLIDYGFHAPTMSFPVPGTLMIEPTESESLEELDRFCEAMLLIHQEILDVQNGTLDKIDNPLKNSPHTAAM 910
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_LEPBJ (Glycine dehydrogenase [decarboxylating] OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=gcvP PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 3.649e-54 Identity = 100/157 (63.69%), Postives = 129/157 (82.17%), Query Frame = 1 Query: 64 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSL 534 G ++AAPWGSA I+ IS+ YIA+MGS+GLT A++I+ILNANY+AKRLEK YP+L++G NG VAHE I+D+R K +A IE EDVAKRL+DYGFH PTMS+PVPGTLMIEPTESES EELDR+C+A++ I +EI ++NG D +N LK +PH ++ Sbjct: 754 GAVSAAPWGSASIVLISWIYIALMGSEGLTNATRISILNANYIAKRLEKAYPVLYKGKNGFVAHECILDVRPFKKSAEIEVEDVAKRLIDYGFHAPTMSFPVPGTLMIEPTESESLEELDRFCEAMLLIHQEILDVQNGTLDKIDNPLKNSPHTAAM 910
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_LEPIC (Glycine dehydrogenase [decarboxylating] OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gcvP PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 4.765e-54 Identity = 100/158 (63.29%), Postives = 130/158 (82.28%), Query Frame = 1 Query: 64 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLL 537 G ++AAPWGSA I+ IS+ YIA+MGS+GLT A++ +ILNANY+AKRLEK YP+L++G NG VAHE I+DLR K +AGIE EDVAKRL+DYGFH PTMS+PVPGTLMIEPTESES EELDR+C+A++ I +EI +++G D +N LK +PH +++ Sbjct: 754 GAVSAAPWGSASIVLISWVYIALMGSEGLTNATRNSILNANYIAKRLEKVYPVLYKGKNGFVAHECILDLRPFKKSAGIEVEDVAKRLIDYGFHAPTMSFPVPGTLMIEPTESESLEELDRFCEAMLLIYQEILDVQSGTLDKTDNPLKNSPHTAAMV 911
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_BURTA (Glycine dehydrogenase [decarboxylating] OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=gcvP PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 4.765e-54 Identity = 100/159 (62.89%), Postives = 131/159 (82.39%), Query Frame = 1 Query: 61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLL 537 +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL HYP+L+ G G VAHE I+DLR +K+++GI +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+ A+I+IR+EI +E G+AD +N L+ APH +++ Sbjct: 764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKDSSGITVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFVAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVV 922
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_BURS3 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia sp. (strain 383) GN=gcvP PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 4.765e-54 Identity = 100/159 (62.89%), Postives = 130/159 (81.76%), Query Frame = 1 Query: 61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLL 537 +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL HYP+L+ G G VAHE I+DLR +K ++GI +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+ A+I+IR+EI +E G+AD +N L+ APH +++ Sbjct: 764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKESSGISVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVV 922 The following BLAST results are available for this feature:
BLAST of CK935759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 368
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935759 ID=CK935759; Name=CK935759; organism=Citrus sinensis; type=EST; length=541bpback to top |