CK935759

Overview
NameCK935759
Unique NameCK935759
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1849 contig Csv1_Contig1849:1..541. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_BURPS (Glycine dehydrogenase [decarboxylating] OS=Burkholderia pseudomallei GN=gcvP PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 4.765e-54
Identity = 100/159 (62.89%), Postives = 131/159 (82.39%), Query Frame = 1 
Query:   61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLL 537
            +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL  HYP+L+ G  G VAHE I+DLR +K+++GI  +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+  A+I+IR+EI  +E G+AD  +N L+ APH  +++
Sbjct:  764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKDSSGITVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVV 922
[Close]
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_BURP6 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia pseudomallei (strain 668) GN=gcvP PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 4.765e-54
Identity = 100/159 (62.89%), Postives = 131/159 (82.39%), Query Frame = 1 
Query:   61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLL 537
            +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL  HYP+L+ G  G VAHE I+DLR +K+++GI  +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+  A+I+IR+EI  +E G+AD  +N L+ APH  +++
Sbjct:  764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKDSSGITVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVV 922
[Close]
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_BURP1 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia pseudomallei (strain 1710b) GN=gcvP PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 4.765e-54
Identity = 100/159 (62.89%), Postives = 131/159 (82.39%), Query Frame = 1 
Query:   61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLL 537
            +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL  HYP+L+ G  G VAHE I+DLR +K+++GI  +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+  A+I+IR+EI  +E G+AD  +N L+ APH  +++
Sbjct:  764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKDSSGITVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVV 922
[Close]
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_BURP0 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia pseudomallei (strain 1106a) GN=gcvP PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 4.765e-54
Identity = 100/159 (62.89%), Postives = 131/159 (82.39%), Query Frame = 1 
Query:   61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLL 537
            +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL  HYP+L+ G  G VAHE I+DLR +K+++GI  +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+  A+I+IR+EI  +E G+AD  +N L+ APH  +++
Sbjct:  759 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKDSSGITVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVV 917
[Close]
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_BURMS (Glycine dehydrogenase [decarboxylating] OS=Burkholderia mallei (strain SAVP1) GN=gcvP PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 4.765e-54
Identity = 100/159 (62.89%), Postives = 131/159 (82.39%), Query Frame = 1 
Query:   61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLL 537
            +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL  HYP+L+ G  G VAHE I+DLR +K+++GI  +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+  A+I+IR+EI  +E G+AD  +N L+ APH  +++
Sbjct:  764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKDSSGITVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVV 922
[Close]
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_BURMA (Glycine dehydrogenase [decarboxylating] OS=Burkholderia mallei GN=gcvP PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 4.765e-54
Identity = 100/159 (62.89%), Postives = 131/159 (82.39%), Query Frame = 1 
Query:   61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLL 537
            +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL  HYP+L+ G  G VAHE I+DLR +K+++GI  +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+  A+I+IR+EI  +E G+AD  +N L+ APH  +++
Sbjct:  764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKDSSGITVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVV 922
[Close]
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_BURM9 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia mallei (strain NCTC 10229) GN=gcvP PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 4.765e-54
Identity = 100/159 (62.89%), Postives = 131/159 (82.39%), Query Frame = 1 
Query:   61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLL 537
            +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL  HYP+L+ G  G VAHE I+DLR +K+++GI  +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+  A+I+IR+EI  +E G+AD  +N L+ APH  +++
Sbjct:  764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKDSSGITVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVV 922
[Close]
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_BURM7 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia mallei (strain NCTC 10247) GN=gcvP PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 4.765e-54
Identity = 100/159 (62.89%), Postives = 131/159 (82.39%), Query Frame = 1 
Query:   61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLL 537
            +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL  HYP+L+ G  G VAHE I+DLR +K+++GI  +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+  A+I+IR+EI  +E G+AD  +N L+ APH  +++
Sbjct:  764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKDSSGITVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVV 922
[Close]
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_TERTT (Glycine dehydrogenase [decarboxylating] OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=gcvP PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 6.224e-54
Identity = 104/174 (59.77%), Postives = 131/174 (75.29%), Query Frame = 1 
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPH 522
            L +HP+    G  A       GT++AAPWGSA ILPIS+ YI MMG+KG+  AS+ AILNANY+AKRL+ H+PIL+ G +G VAHE ++DLR LK  +G+  ED+AKRLMD+GFH PTMS+PV GTLMIEPTESE++ ELDR+CDA+I IREEI +IE G+    +N L  APH
Sbjct:  735 LAAHPLQEIPGTVAAN-----GTVSAAPWGSASILPISWMYIRMMGAKGMKMASEYAILNANYIAKRLKNHFPILYSGKHGFVAHECLLDLRPLKEASGVSEEDIAKRLMDFGFHAPTMSFPVAGTLMIEPTESENQFELDRFCDAMIQIREEIRKIEQGELPADDNPLVNAPH 903
[Close]
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_BRAJA (Glycine dehydrogenase [decarboxylating] OS=Bradyrhizobium japonicum GN=gcvP PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 6.224e-54
Identity = 100/164 (60.98%), Postives = 128/164 (78.05%), Query Frame = 1 
Query:   31 GIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPH 522
            G PA     P+G ++AAP+GSA IL ISY YI MMG +GL  A++IAILNANY+A RL+ H+P+L++   G VAHE IVD R LK T+G+  +D+AKRL+DYGFH PTMS+PVPGTLMIEPTESESK ELDR+CDA+I+IR+EI ++E G+  I  + L+ APH
Sbjct:  730 GHPATRGDAPVGPVSAAPFGSASILTISYIYILMMGGEGLKRATEIAILNANYIAARLDAHFPVLYKNARGRVAHECIVDPRALKTTSGVTVDDIAKRLIDYGFHAPTMSFPVPGTLMIEPTESESKAELDRFCDAMIAIRKEIGEVEAGRFKIEASPLRHAPH 893
The following BLAST results are available for this feature:
BLAST of CK935759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSP_BURPS4.765e-5462.89Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BURP64.765e-5462.89Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BURP14.765e-5462.89Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BURP04.765e-5462.89Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BURMS4.765e-5462.89Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BURMA4.765e-5462.89Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BURM94.765e-5462.89Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BURM74.765e-5462.89Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_TERTT6.224e-5459.77Glycine dehydrogenase [decarboxylating] OS=Teredin... [more]
GCSP_BRAJA6.224e-5460.98Glycine dehydrogenase [decarboxylating] OS=Bradyrh... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004552_A06 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_A06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935759 ID=CK935759; Name=CK935759; organism=Citrus sinensis; type=EST; length=541bp
CTGCCTTCACATCCTGTGGTATCCACAGGTGGTATTCCTGCCCCTGAAAA
GTCTCAACCCCTGGGCACAATTGCAGCTGCACCCTGGGGCTCTGCACTTA
TCCTGCCAATATCATATACGTACATAGCTATGATGGGTTCTAAAGGACTC
ACTGAGGCTTCAAAGATAGCTATTCTGAATGCAAACTACATGGCAAAACG
TTTGGAGAAACATTACCCCATCCTTTTCCGTGGTGTCAATGGAACAGTTG
CTCATGAATTCATTGTGGACTTAAGAGGCTTGAAGAATACTGCCGGGATA
GAGCCCGAAGATGTTGCCAAACGTCTTATGGATTATGGATTCCATGGACC
AACAATGTCATGGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAA
GTGAAAGCAAGGAAGAGTTGGACAGGTATTGTGATGCTCTCATCTCCATC
AGAGAAGAAATTGCACAGATTGAAAATGGGAAGGCAGATATCCACAACAA
TGTCCTGAAGGGGGCGCCTCATCCACCATCTTTGCTCATGG
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