CK935759
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_SYNS9 (Glycine dehydrogenase [decarboxylating] OS=Synechococcus sp. (strain CC9902) GN=gcvP PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 3.415e-52 Identity = 100/180 (55.56%), Postives = 130/180 (72.22%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLM 540 LP HP + + + +G ++AA GSA ILPIS+ Y+ MMG+ L +AS +A+L+ANY+A RL+ H+P+LFRG G VAHE I+DLR LK AGI+ +D+AKRLMDYGFH PT+SWPV GT+M+EPTESES ELDR+ DALI+IR+E+ IE G D NN LK APH + +M Sbjct: 731 LPGHPFEN-------QTASAIGPVSAAALGSASILPISWMYLRMMGADALRQASAVALLSANYLAHRLDDHFPVLFRGATGRVAHECILDLRPLKRDAGIDVDDIAKRLMDYGFHAPTVSWPVAGTVMVEPTESESLSELDRFADALIAIRDEVRAIETGAMDALNNPLKRAPHTMAAVM 903
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_RALME (Glycine dehydrogenase [decarboxylating] OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=gcvP PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 3.415e-52 Identity = 100/160 (62.50%), Postives = 128/160 (80.00%), Query Frame = 1 Query: 61 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLM 540 +G ++AAP+GSA ILPIS+ YIAMMGS GLT A++ AIL ANY+A+RL H+P+L+ G +G VAHE I+DLR L+ GI EDVAKRLMDYGFH PTMS+PVPGTLMIEPTESE+ ELDR+ DA+I+IR EIA++E+G D +N LK APH ++++ Sbjct: 761 IGGVSAAPFGSASILPISWMYIAMMGSAGLTAATENAILTANYVARRLSPHFPVLYTGQHGLVAHECILDLRPLQKATGISNEDVAKRLMDYGFHAPTMSFPVPGTLMIEPTESEALHELDRFIDAMIAIRGEIARVEDGSFDREDNPLKHAPHTAAVVV 920
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_VIBCM (Glycine dehydrogenase [decarboxylating] OS=Vibrio cholerae serotype O1 (strain M66-2) GN=gcvP PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 7.608e-52 Identity = 98/151 (64.90%), Postives = 120/151 (79.47%), Query Frame = 1 Query: 70 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPH 522 ++AA GSA ILPIS+ YIAMMG+ GL EA+K+AILNANY+ +RL HYPIL+RG NG VAHE I+D+R LK GI ED+AKRLMDYGFH PTMS+PV GTLM+EPTESE ELDR+CDALI+IR EI +++NG+ + +N L APH Sbjct: 745 VSAADLGSASILPISWAYIAMMGADGLAEATKLAILNANYVMERLRPHYPILYRGANGRVAHECIIDIRPLKEETGISEEDIAKRLMDYGFHAPTMSFPVAGTLMVEPTESEDLAELDRFCDALIAIRGEIDKVKNGEWPLESNPLVHAPH 895
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_VIBC3 (Glycine dehydrogenase [decarboxylating] OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=gcvP PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 7.608e-52 Identity = 98/151 (64.90%), Postives = 120/151 (79.47%), Query Frame = 1 Query: 70 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPH 522 ++AA GSA ILPIS+ YIAMMG+ GL EA+K+AILNANY+ +RL HYPIL+RG NG VAHE I+D+R LK GI ED+AKRLMDYGFH PTMS+PV GTLM+EPTESE ELDR+CDALI+IR EI +++NG+ + +N L APH Sbjct: 745 VSAADLGSASILPISWAYIAMMGADGLAEATKLAILNANYVMERLRPHYPILYRGANGRVAHECIIDIRPLKEETGISEEDIAKRLMDYGFHAPTMSFPVAGTLMVEPTESEDLAELDRFCDALIAIRGEIDKVKNGEWPLESNPLVHAPH 895
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_ROSDO (Glycine dehydrogenase [decarboxylating] OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=gcvP PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 7.608e-52 Identity = 93/153 (60.78%), Postives = 121/153 (79.08%), Query Frame = 1 Query: 64 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPH 522 G ++AAP+GS +LPIS+ Y MMG GLT+A+++AILNANY+AKRLE + +L+RG G VAHE ++D+R + +AG+ ED+AKRL+D GFH PTMSWPV GTLM+EPTESE+K ELDR+CDA+++IR EIA IE G+ D NN LK APH Sbjct: 736 GAVSAAPFGSPSLLPISWAYCLMMGGDGLTQATRVAILNANYIAKRLEGAFDVLYRGPTGRVAHECVIDVRPFEKSAGVSVEDIAKRLIDCGFHAPTMSWPVAGTLMVEPTESETKAELDRFCDAMLAIRAEIADIEEGRMDAANNPLKNAPH 888
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_RALSO (Glycine dehydrogenase [decarboxylating] OS=Ralstonia solanacearum GN=gcvP PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 7.608e-52 Identity = 98/165 (59.39%), Postives = 130/165 (78.79%), Query Frame = 1 Query: 46 EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLM 540 + SQ +G ++AAP+GSA ILPIS+ YIAMMG+ GLT A++ AIL+ANY+A+RL +YP+L+ G +G VAHE I+D+R L+ +GI ED+AKRLMD+GFH PTMS+PVPGTLMIEPTESE K ELDR+ DA+I+IR E+ Q+ +G D +N LK APH ++M Sbjct: 764 DASQNIGAVSAAPFGSASILPISWMYIAMMGAAGLTAATEAAILSANYVARRLSPYYPVLYTGAHGLVAHECILDIRPLQKESGISNEDIAKRLMDFGFHAPTMSFPVPGTLMIEPTESEPKVELDRFIDAMIAIRGEVDQVISGAFDREDNPLKHAPHTAQVVM 928
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_STRCO (Glycine dehydrogenase [decarboxylating] OS=Streptomyces coelicolor GN=gcvP PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 9.936e-52 Identity = 98/179 (54.75%), Postives = 130/179 (72.63%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLL 537 LP+HP+ PA +G I+AAPWGSA ILPIS++Y+ +MG +GL A+++A+L+ANY+AKRLE H+P+L+ G G VAHE I+DLR L G+ +DVAKRL+DYGFH PTMS+PV GTLMIEPTESE ELDR+C+A+I+IR EI ++ +G +N L+GAPH L Sbjct: 735 LPNHPLQ-----PAAGPQTGVGPISAAPWGSAGILPISWSYVRLMGGEGLKRATQVAVLSANYIAKRLEPHFPVLYNGPGGLVAHECIIDLRPLTKATGVSVDDVAKRLIDYGFHAPTMSFPVAGTLMIEPTESEDLAELDRFCEAMIAIRAEIEKVGSGAWPADDNPLRGAPHTADAL 908
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_ALISL (Glycine dehydrogenase [decarboxylating] OS=Aliivibrio salmonicida (strain LFI1238) GN=gcvP PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 9.936e-52 Identity = 97/157 (61.78%), Postives = 121/157 (77.07%), Query Frame = 1 Query: 70 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLM 540 ++AA GSA ILPIS+ YIAMMG GLTEA+K+AILNANY+ RL HYP+L+RG NG +AHE I+D+R LK GI ED+AKRLMD+GFH PTMS+PV GTLMIEPTESE ELDR+C+A+I+IREE+ +++ G+ + NN L APH LM Sbjct: 746 VSAADLGSASILPISWAYIAMMGEMGLTEATKVAILNANYVMDRLRPHYPVLYRGTNGRIAHECIIDIRPLKEATGISEEDIAKRLMDFGFHAPTMSFPVAGTLMIEPTESEDLAELDRFCEAMIAIREEMNKVQQGEWPLDNNPLVNAPHTQVDLM 902
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP_PROMA (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus GN=gcvP PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 1.695e-51 Identity = 97/161 (60.25%), Postives = 126/161 (78.26%), Query Frame = 1 Query: 40 APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPH 522 A + + +G I+A+P GSA ILPIS+ YI MMG+ GL +AS +AIL+ANY+A +L+ ++ +LF+ NG VAHE I+DLR +K GIE +DVAKRLMDYGFH PT+SWPV GTLMIEPTESES EE++R+C+A+ISIR EI IE+G D+ NN L+ APH Sbjct: 744 ASDNNAAIGAISASPLGSASILPISWMYIRMMGADGLRQASSLAILSANYIANKLDPYFQVLFKAPNGKVAHECILDLRSIKRITGIEVDDVAKRLMDYGFHAPTISWPVAGTLMIEPTESESFEEINRFCEAMISIRSEIDAIESGITDLSNNPLRLAPH 904
BLAST of CK935759 vs. ExPASy Swiss-Prot
Match: GCSP1_COLP3 (Glycine dehydrogenase [decarboxylating] 1 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=gcvP1 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 2.891e-51 Identity = 97/174 (55.75%), Postives = 132/174 (75.86%), Query Frame = 1 Query: 1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPH 522 LP H +++ E ++ G +++AP+GSA ILPI+Y YIA++G KG+T+A+K AI NANY++K+L +HYPIL+ G NG VAHE IVDLR LK ++G+ D+AKRLMDYGFH PTMS+PV GT MIEPTESESK ELDR+ +A++ IR+E+ ++E+G+ NN L APH Sbjct: 739 LPDHALINVD-----EATKGNGAVSSAPFGSASILPITYLYIALLGKKGVTDATKYAITNANYVSKKLSEHYPILYSGKNGRVAHECIVDLRPLKASSGVTEVDMAKRLMDYGFHSPTMSFPVAGTFMIEPTESESKVELDRFIEAMVCIRDEVRKVESGEWASDNNPLHNAPH 907 The following BLAST results are available for this feature:
BLAST of CK935759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 368
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935759 ID=CK935759; Name=CK935759; organism=Citrus sinensis; type=EST; length=541bpback to top |