CK935763

Overview
NameCK935763
Unique NameCK935763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACOX2_ARATH (Acyl-coenzyme A oxidase 2, peroxisomal OS=Arabidopsis thaliana GN=ACX2 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 5.638e-23
Identity = 50/104 (48.08%), Postives = 69/104 (66.35%), Query Frame = 3
Query:  495 GIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQL 806
            G  D SL IK+GV + LWGG++   GT++H +K+    +N    GCFAMTEL HGSNV+G++T  T+D    EF+I+TP + A K+WIG AA H     VF++L
Sbjct:  137 GSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYFDGIDNLDYTGCFAMTELHHGSNVQGLQTTATFDPLKDEFVIDTPNDGAIKWWIGNAAVHGKFATVFARL 240          
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACOX_CANGA (Acyl-coenzyme A oxidase OS=Candida glabrata GN=POX1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.654e-22
Identity = 53/109 (48.62%), Postives = 71/109 (65.14%), Query Frame = 3
Query:  504 DHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVV---LGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEINGK 821
            D  L+ +IGVH  L+G  I+  GT    + WL+     ++    GCFAMTELGHGSNV  ++T  TYD  +  FIINTP  +A K+WIGGAA+ ATHT  +++L +NGK
Sbjct:  140 DPQLSTRIGVHLGLFGNCIKGNGTDEQIKYWLQTRGAILIKGIYGCFAMTELGHGSNVAQLQTTATYDQESDTFIINTPDLAATKWWIGGAAHSATHTACYARLLVNGK 248          
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACOX4_CANTR (Acyl-coenzyme A oxidase 4 OS=Candida tropicalis GN=POX4 PE=2 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 1.063e-21
Identity = 61/159 (38.36%), Postives = 86/159 (54.09%), Query Frame = 3
Query:  354 YNQTMEQQREMTMKRISYLLERNVFEGWLTXXXXXXXXXXXXXXXVTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVV---LGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEINGK 821
            Y+ T +QQRE+T  +I+ +      E   T               + GIFD  +  +IGV+  L+   I+  GT      W  + E   V    GCF MTEL HGSNV G+ET  T+D  + EF+INTP   A K+WIGGAA+ ATH  V+++L ++G+
Sbjct:   68 YDLTKDQQRELTAVKINRIARYREQESIDTFNKRLS---------LIGIFDPQVGTRIGVNLGLFLSCIRGNGTTSQLNYWANEKETADVKGIYGCFGMTELAHGSNVAGLETTATFDKESDEFVINTPHIGATKWWIGGAAHSATHCSVYARLIVDGQ 217          
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACOX_KLULA (Acyl-coenzyme A oxidase OS=Kluyveromyces lactis GN=POX1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.814e-21
Identity = 52/109 (47.71%), Postives = 70/109 (64.22%), Query Frame = 3
Query:  504 DHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYV---VLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEINGK 821
            D  L+ +IGVH  L+G  I+  GT      WL++    +   + GCFAMTELGHGSNV  ++T  TYD ++  F INTP   A K+WIGGAA+ ATHT  +++L +NGK
Sbjct:  136 DPGLSTRIGVHLGLFGNCIKGNGTDEQIHYWLQEKGALLLKGIYGCFAMTELGHGSNVAQLQTTATYDPSSDTFKINTPDLLATKWWIGGAAHSATHTTAYARLIVNGK 244          
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACOX_PICPA (Acyl-coenzyme A oxidase OS=Pichia pastoris GN=POX1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.369e-21
Identity = 63/164 (38.41%), Postives = 92/164 (56.10%), Query Frame = 3
Query:  354 YNQTMEQQREMTMKRISYL---LERNV--FEGWLTXXXXXXXXXXXXXXXVTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDT-ENYV--VLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEINGK 821
            Y+ T +Q RE+T ++I+ L   +E++   FE +                 +  I D  L  ++GVH  L+  AI+  GT+   + W  +    Y+  V GCF MTEL HGSNV G+ET  T+D  T EF INTP   A K+WIGGAA+ A H +V+++L ++GK
Sbjct:   64 YDLTKDQHRELTAQKIARLASYIEKDAPFFENF------------QKRLNLIAIVDPQLGTRVGVHLGLFLSAIRGNGTEEQFKYWAFERGAAYLKDVYGCFGMTELAHGSNVAGLETTATFDQKTKEFEINTPHLGATKWWIGGAAHSANHCVVYARLIVSGK 215          
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACOXL_MOUSE (Acyl-coenzyme A oxidase-like protein OS=Mus musculus GN=Acoxl PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.369e-21
Identity = 52/106 (49.06%), Postives = 67/106 (63.21%), Query Frame = 3
Query:  504 DHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEINGK 821
            D S++IK G+ F L+GGAI   G+  H  KW    +     G FAMTE GHGSNVRGI+T  T+D +  EF+I+ PCE+A K +IG A  H  +  VF+QL I GK
Sbjct:   73 DVSMSIKCGILFLLFGGAISNLGSPEHVTKWFWPLKEQKYTGMFAMTERGHGSNVRGIQTEATFDLDNQEFVIDMPCENAHKMYIGNAM-HGNYAAVFAQLIIEGK 177          
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACOXL_HUMAN (Acyl-coenzyme A oxidase-like protein OS=Homo sapiens GN=ACOXL PE=2 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 9.001e-21
Identity = 48/111 (43.24%), Postives = 72/111 (64.86%), Query Frame = 3
Query:  489 VTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEINGK 821
            V  + D +  +K G+ ++L+GGAI+  G+  H  KW +  +     G FAMTE GHGSN RGI+T  T+D +  EF+I+TPCE+A+K +IG A  +  +  VF+QL I+G+
Sbjct:   42 VLSMADMATGVKCGIIYWLFGGAIRNLGSPEHVTKWFQPLQEQKYTGMFAMTERGHGSNARGIQTEATFDLSAQEFVIDTPCENAEKMYIGNAM-YGNYAAVFAQLIIDGR 151          
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACOX1_ARATH (Peroxisomal acyl-coenzyme A oxidase 1 OS=Arabidopsis thaliana GN=ACX1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.001e-21
Identity = 43/99 (43.43%), Postives = 67/99 (67.68%), Query Frame = 3
Query:  525 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEINGK 821
            + +H+ ++  AI+  GT+   +KWL       ++GC+A TELGHGSNV+G+ET  T+D  T EF+I+TP ++A K+W GG    +TH +V+++L  NGK
Sbjct:   99 VDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAVVYARLITNGK 197          
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACOX_ASHGO (Acyl-coenzyme A oxidase OS=Ashbya gossypii GN=POX1 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.005e-20
Identity = 50/114 (43.86%), Postives = 72/114 (63.16%), Query Frame = 3
Query:  489 VTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVV---LGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEINGK 821
            +  + D  LA ++GV+  L+G A++  GT    + WL++     V    GCFAMTELGHGSNV  ++T  TYD  +  F+I TP   A K+WIGGAA+ ATH+ V+++L + GK
Sbjct:  131 LVALIDPQLATRLGVNLSLFGNAVRGNGTDEQIKYWLQERGLIFVKGIYGCFAMTELGHGSNVANLQTRATYDPASDSFVIQTPDLVATKWWIGGAAHSATHSTVYARLIVEGK 244          
BLAST of CK935763 vs. ExPASy Swiss-Prot
Match: ACOX_YEAST (Acyl-coenzyme A oxidase OS=Saccharomyces cerevisiae GN=POX1 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 9.951e-20
Identity = 49/109 (44.95%), Postives = 67/109 (61.47%), Query Frame = 3
Query:  504 DHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRD---TENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEINGK 821
            D  L  ++GVH  L+G  I+  GT      WL++   T    + GCFAMTELGHGSNV  ++T   YD     F+I+TP  +A K+WIGGAA+ ATH  V+++L + GK
Sbjct:  140 DPQLGTRVGVHLGLFGNCIKGNGTDEQIRYWLQERGATLMKGIYGCFAMTELGHGSNVAQLQTRAVYDKQNDTFVIDTPDLTATKWWIGGAAHSATHAAVYARLIVEGK 248          
The following BLAST results are available for this feature:
BLAST of CK935763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
ACOX2_ARATH5.638e-2348.08Acyl-coenzyme A oxidase 2, peroxisomal OS=Arabidop... [more]
ACOX_CANGA3.654e-2248.62Acyl-coenzyme A oxidase OS=Candida glabrata GN=POX... [more]
ACOX4_CANTR1.063e-2138.36Acyl-coenzyme A oxidase 4 OS=Candida tropicalis GN... [more]
ACOX_KLULA1.814e-2147.71Acyl-coenzyme A oxidase OS=Kluyveromyces lactis GN... [more]
ACOX_PICPA2.369e-2138.41Acyl-coenzyme A oxidase OS=Pichia pastoris GN=POX1... [more]
ACOXL_MOUSE2.369e-2149.06Acyl-coenzyme A oxidase-like protein OS=Mus muscul... [more]
ACOXL_HUMAN9.001e-2143.24Acyl-coenzyme A oxidase-like protein OS=Homo sapie... [more]
ACOX1_ARATH9.001e-2143.43Peroxisomal acyl-coenzyme A oxidase 1 OS=Arabidops... [more]
ACOX_ASHGO2.005e-2043.86Acyl-coenzyme A oxidase OS=Ashbya gossypii GN=POX1... [more]
ACOX_YEAST9.951e-2044.95Acyl-coenzyme A oxidase OS=Saccharomyces cerevisia... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004390_H03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935763 ID=CK935763; Name=CK935763; organism=Citrus sinensis; type=EST; length=821bp
GGGGAGGCTGAACACTCTCCGCTTTAATTTATTTATATCATCCTCTTTGG
TTAATTTAAGAAAAAAAGGAAAAAAAATAGAAAAGAAACAAAATGGATCG
CGCCATTCACAGAACCATAATCATCAAAAATCATCTCTTACAACCAAACT
CGGATCAAATTCTCACGACAAACGCGTGTCTGAGCTATTCCCCGCCGGAA
CTCAATGAAGTTTACGATTTTGACCTCAAGGAAATGCGGAAACTACTCGA
CGGCCACAACTTGCAAGAGCGGGACTGGCTGTTCAATCTCATGGTGCAGA
GCAAGCTGTTCAATCCGAGAAAAAGAGGAGAGAAGGTCTACGTGGCGCCT
GATTACAATCAGACGATGGAGCAGCAGCGAGAGATGACGATGAAGCGAAT
CTCGTATTTGCTTGAACGCAACGTTTTTGAAGGATGGCTTACTGCCAAAG
GAGCAGAAGCCGAGTTGAGAAAATTAGCGCTGCTTGAGGTCACCGGAATA
TTCGACCACTCGTTAGCGATTAAAATCGGTGTTCACTTCTTTTTATGGGG
AGGCGCCATTCAGTTTTTCGGTACACAGCGCCACCACGAGAAGTGGCTGA
GGGACACTGAAAATTATGTGGTCTTGGGTTGCTTTGCAATGACAGAATTG
GGCCACGGAAGTAATGTTCGAGGAATTGAAACTGTCACTACATATGATGC
AAATACGGGAGAGTTTATCATCAACACCCCCTGTGAATCAGCTCAGAAGT
ATTGGATCGGTGGGGCAGCTAATCATGCAACGCATACAATCGTCTTTTCA
CAGCTCGAAATTAATGGGAAA
back to top