CK935766

Overview
NameCK935766
Unique NameCK935766
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length805
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1850 contig Csv1_Contig1850:1..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935766 vs. ExPASy Swiss-Prot
Match: ACOX_YEAST (Acyl-coenzyme A oxidase OS=Saccharomyces cerevisiae GN=POX1 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.253e-18
Identity = 46/103 (44.66%), Postives = 63/103 (61.17%), Query Frame = 3
Query:  504 DHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRD---TENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQ 803
            D  L  ++GVH  L+G  I+  GT      WL++   T    + GCFAMTELGHGSNV  ++T   YD     F+I+TP  +A K+WIGGAA+ ATH  V+++
Sbjct:  140 DPQLGTRVGVHLGLFGNCIKGNGTDEQIRYWLQERGATLMKGIYGCFAMTELGHGSNVAQLQTRAVYDKQNDTFVIDTPDLTATKWWIGGAAHSATHAAVYAR 242          
BLAST of CK935766 vs. ExPASy Swiss-Prot
Match: ACOX2_CANMA (Acyl-coenzyme A oxidase 2 OS=Candida maltosa GN=POX2 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.861e-18
Identity = 68/234 (29.06%), Postives = 114/234 (48.72%), Query Frame = 3
Query:  144 PNSDQILTTNACLSYSPPELNEVY-------DFDLKEMRKLLDGHNLQERDWLFNLMVQSKLFNPRKRGEKVYVAPD-YNQTMEQQREMTMKRISYL---LERNVFEGWLTXXXXXXXXXXXXXXXVTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVV---LGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQ 803
            P+++  +  +   S  PP+ ++         D+DLKEM + L+G   +  + L       +L+   +R   +   P+ ++ T  ++RE    RI+ +   LE   +E +                 +  + D SL I++ V+  L+   I+  GTQ+ ++ W +  E   V   L  F   ELGHG NV G E   T+D  T +FII+TP   A K+WIGGAA+ ATHT+ +++
Sbjct:   19 PDTNPKIVADIISSKEPPQPSQDVAEERSRTDWDLKEMHEFLEGDEAKSEEIL-------RLYQSIERDPILQTRPEQFDYTKNEERESVALRINQMSKYLETEPYEKF------------RRRLQLMTVNDPSLGIRMLVNIGLFLNCIRGNGTQKQYDFWAKTKEAGKVKQLLRLFRYDELGHGFNVAGCEIFATFDEKTDQFIIDTPHIGATKWWIGGAAHSATHTVCYAR 233          
BLAST of CK935766 vs. ExPASy Swiss-Prot
Match: ACO12_ARATH (Putative peroxisomal acyl-coenzyme A oxidase 1.2 OS=Arabidopsis thaliana GN=ACX1.2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.170e-17
Identity = 36/93 (38.71%), Postives = 64/93 (68.82%), Query Frame = 3
Query:  525 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQ 803
            + +H+ ++  AI+  GT++  +KWL       ++GC+A TELGHGSNV+G+ET  T+D  T +FII++P +++ K+W GG    +TH +++++
Sbjct:   99 LDLHWGMFVPAIKGQGTEQQQQKWLSLATKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDQFIIHSPTQTSSKWWPGGLGKVSTHAVIYAR 191          
BLAST of CK935766 vs. ExPASy Swiss-Prot
Match: ACOX3_PONAB (Peroxisomal acyl-coenzyme A oxidase 3 OS=Pongo abelii GN=ACOX3 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.996e-17
Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = 3
Query:  495 GIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQ 803
            G++D SLA K  +H  ++G AI   G++RH   +++      + GCFA+TEL HGSN + I T   YD  T EFII++P   A K+W+G     ATH +VF++
Sbjct:  111 GMYDSSLAAKYLIHSLVFGSAIYSSGSERHLT-YIQKIFRMEIFGCFALTELSHGSNTKAIRTTAHYDPATEEFIIHSPDFEAAKFWVGNMGKTATHAVVFAK 212          
BLAST of CK935766 vs. ExPASy Swiss-Prot
Match: ACOX3_MOUSE (Peroxisomal acyl-coenzyme A oxidase 3 OS=Mus musculus GN=Acox3 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.996e-17
Identity = 41/103 (39.81%), Postives = 64/103 (62.14%), Query Frame = 3
Query:  495 GIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQ 803
            G++D SLA K  +H  ++G  +   G+++H  K+L    +  + GCFA+TEL HGSN + + T   YD +T EFI+++P   A K+W+G     ATH +VF+Q
Sbjct:  111 GMYDWSLANKCVLHMLVFGTTVFVSGSEKHF-KYLEKIYSLEIFGCFALTELSHGSNTKAMRTTAHYDPDTQEFILHSPDFEAAKFWVGNLGKTATHAVVFAQ 212          
BLAST of CK935766 vs. ExPASy Swiss-Prot
Match: ACOX3_HUMAN (Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapiens GN=ACOX3 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.447e-17
Identity = 42/103 (40.78%), Postives = 63/103 (61.17%), Query Frame = 3
Query:  495 GIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQ 803
            G++D SLA K  +H  ++G A+   G++RH   +++      + GCFA+TEL HGSN + I T   YD  T EFII++P   A K+W+G     ATH +VF++
Sbjct:  111 GMYDSSLAAKYLLHSLVFGSAVYSSGSERHLT-YIQKIFRMEIFGCFALTELSHGSNTKAIRTTAHYDPATEEFIIHSPDFEAAKFWVGNMGKTATHAVVFAK 212          
BLAST of CK935766 vs. ExPASy Swiss-Prot
Match: ACOX1_RAT (Peroxisomal acyl-coenzyme A oxidase 1 OS=Rattus norvegicus GN=Acox1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.421e-16
Identity = 35/93 (37.63%), Postives = 60/93 (64.52%), Query Frame = 3
Query:  525 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQ 803
            +G+++ ++   +   GT    EKW+R ++   ++G +A TE+GHG+++RG+ET  TYD  T EFI+N+P  ++ K+W GG    + H IV +Q
Sbjct:  100 VGLNYSMFIPTLLNQGTTAQQEKWMRPSQELQIIGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQ 192          
BLAST of CK935766 vs. ExPASy Swiss-Prot
Match: ACOX1_BOVIN (Peroxisomal acyl-coenzyme A oxidase 1 OS=Bos taurus GN=ACOX1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.431e-15
Identity = 35/93 (37.63%), Postives = 59/93 (63.44%), Query Frame = 3
Query:  525 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQ 803
            +G+++ ++   +   GT    EKWL  ++   ++G +A TE+GHG+++RG+ET  TYD  T EFI+N+P  ++ K+W GG    + H IV +Q
Sbjct:  100 VGLNYSMFIPTLLNQGTTAQQEKWLHSSKGLEIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQ 192          
BLAST of CK935766 vs. ExPASy Swiss-Prot
Match: ACOX1_CAVPO (Peroxisomal acyl-coenzyme A oxidase 1 OS=Cavia porcellus GN=ACOX1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.868e-15
Identity = 36/93 (38.71%), Postives = 58/93 (62.37%), Query Frame = 3
Query:  525 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQ 803
            +G+++ ++   +   GT    EKWL  +    ++G +A TE+GHG+++RG+ET  TYD  T EFIIN+P  ++ K+W GG    + H IV +Q
Sbjct:  100 VGLNYSMFIPTLLNQGTTAQQEKWLHPSTGLQIIGTYAQTEMGHGTHLRGLETTATYDPKTQEFIINSPTVTSIKWWPGGLGKTSNHAIVLAQ 192          
BLAST of CK935766 vs. ExPASy Swiss-Prot
Match: ACOX1_MOUSE (Peroxisomal acyl-coenzyme A oxidase 1 OS=Mus musculus GN=Acox1 PE=1 SV=4)

HSP 1 Score: 82.8037 bits (203), Expect = 2.440e-15
Identity = 34/93 (36.56%), Postives = 59/93 (63.44%), Query Frame = 3
Query:  525 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQ 803
            +G+++ ++   +   GT    EKW+  ++   ++G +A TE+GHG+++RG+ET  TYD  T EFI+N+P  ++ K+W GG    + H IV +Q
Sbjct:  100 VGLNYSMFIPTLLNQGTTAQQEKWMHPSQELQIIGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQ 192          
The following BLAST results are available for this feature:
BLAST of CK935766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
ACOX_YEAST5.253e-1844.66Acyl-coenzyme A oxidase OS=Saccharomyces cerevisia... [more]
ACOX2_CANMA6.861e-1829.06Acyl-coenzyme A oxidase 2 OS=Candida maltosa GN=PO... [more]
ACO12_ARATH1.170e-1738.71Putative peroxisomal acyl-coenzyme A oxidase 1.2 O... [more]
ACOX3_PONAB1.996e-1741.75Peroxisomal acyl-coenzyme A oxidase 3 OS=Pongo abe... [more]
ACOX3_MOUSE1.996e-1739.81Peroxisomal acyl-coenzyme A oxidase 3 OS=Mus muscu... [more]
ACOX3_HUMAN4.447e-1740.78Peroxisomal acyl-coenzyme A oxidase 3 OS=Homo sapi... [more]
ACOX1_RAT6.421e-1637.63Peroxisomal acyl-coenzyme A oxidase 1 OS=Rattus no... [more]
ACOX1_BOVIN1.431e-1537.63Peroxisomal acyl-coenzyme A oxidase 1 OS=Bos tauru... [more]
ACOX1_CAVPO1.868e-1538.71Peroxisomal acyl-coenzyme A oxidase 1 OS=Cavia por... [more]
ACOX1_MOUSE2.440e-1536.56Peroxisomal acyl-coenzyme A oxidase 1 OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004390_H06 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935766 ID=CK935766; Name=CK935766; organism=Citrus sinensis; type=EST; length=805bp
GGGGAGGCTGAACACTCTTCGCTTTAATTTATTTATATCATCCTCTTTGG
TTAATTTAAGAAAAAAAGGAAAAAAAATAGAAAAGAAACAAAATGGATCG
CGCCATTCACAGAACCATAATCATCAAAAATCATCTCTTACAACCAAACT
CGGATCAAATTCTCACGACAAACGCGTGTCTGAGCTATTCCCCGCCGGAA
CTCAATGAAGTTTACGATTTTGACCTCAAGGAAATGCGGAAACTACTCGA
CGGCCACAACTTGCAAGAGCGGGACTGGCTGTTCAATCTCATGGTGCAGA
GCAAGCTGTTCAATCCGAGAAAAAGAGGAGAGAAGGTCTACGTGGCGCCT
GATTACAATCAGACGATGGAGCAGCAGCGAGAGATGACGATGAAGCGAAT
CTCGTATTTGCTTGAACGCAACGTTTTTGAAGGATGGCTTACTGCCAAAG
GAGCAGAAGCCGAGTTGAGAAAATTAGCGCTGCTTGAGGTCACCGGAATA
TTCGACCACTCGTTAGCGATTAAAATCGGTGTTCACTTCTTTTTATGGGG
AGGCGCCATTCAGTTTTTCGGTACACAGCGCCACCACGAGAAGTGGCTGA
GGGACACTGAAAATTATGTGGTCTTGGGTTGCTTTGCAATGACAGAATTG
GGCCACGGAAGTAATGTTCGAGGAATTGAAACTGTCACTACATATGATGC
AAATACGGGAGAGTTTATCATCAACACCCCCTGTGAATCAGCTCAGAAGT
ATTGGATCGGTGGGGCAGCTAATCATGCAACGCATACAATCGTCTTTTCA
CAGCT
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