CK935766

Overview
NameCK935766
Unique NameCK935766
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length805
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1850 contig Csv1_Contig1850:1..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935766 vs. ExPASy Swiss-Prot
Match: ACOX1_PONAB (Peroxisomal acyl-coenzyme A oxidase 1 OS=Pongo abelii GN=ACOX1 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.187e-15
Identity = 35/93 (37.63%), Postives = 59/93 (63.44%), Query Frame = 3
Query:  525 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQ 803
            +G+++ ++   +   GT    EKWL  ++   ++G +A TE+GHG+++RG+ET  TYD  T EFI+N+P  ++ K+W GG    + H IV +Q
Sbjct:  100 VGLNYSMFIPTLLNQGTTAQKEKWLLSSKGLQIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQ 192          
BLAST of CK935766 vs. ExPASy Swiss-Prot
Match: ACOX1_HUMAN (Peroxisomal acyl-coenzyme A oxidase 1 OS=Homo sapiens GN=ACOX1 PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 3.187e-15
Identity = 35/93 (37.63%), Postives = 59/93 (63.44%), Query Frame = 3
Query:  525 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQ 803
            +G+++ ++   +   GT    EKWL  ++   ++G +A TE+GHG+++RG+ET  TYD  T EFI+N+P  ++ K+W GG    + H IV +Q
Sbjct:  100 VGLNYSMFIPTLLNQGTTAQKEKWLLSSKGLQIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQ 192          
BLAST of CK935766 vs. ExPASy Swiss-Prot
Match: ACOX1_DROME (Probable peroxisomal acyl-coenzyme A oxidase 1 OS=Drosophila melanogaster GN=CG5009 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.187e-15
Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 3
Query:  525 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQ 803
            + +H+ ++   I   GT     +WL    +  ++G +A TELGHG+ +RG+ET   YDA+T EF+INTP  SA K+W GG  + A H +V +Q
Sbjct:  113 LALHYVMFVPTIMGQGTMDQQVEWLSKAWDCEIIGTYAQTELGHGTFLRGLETRADYDASTQEFVINTPSLSAYKWWPGGLGHTANHAVVVAQ 205          
BLAST of CK935766 vs. ExPASy Swiss-Prot
Match: ACOX1_DICDI (Peroxisomal acyl-coenzyme A oxidase 1 OS=Dictyostelium discoideum GN=acox1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.211e-14
Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 3
Query:  609 ENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQ 803
            ENY   G ++ TE+GHGSNV+GIET  T+   TGEF +N+P  ++ K+WIGG    ATHTIVF+Q
Sbjct:  136 ENYQYFGSYSQTEIGHGSNVQGIETTCTFIKETGEFELNSPNLTSTKFWIGGLGKLATHTIVFAQ 200          
BLAST of CK935766 vs. ExPASy Swiss-Prot
Match: ACOX_CAEEL (Probable peroxisomal acyl-coenzyme A oxidase OS=Caenorhabditis elegans GN=C48B4.1 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.896e-13
Identity = 36/90 (40.00%), Postives = 50/90 (55.56%), Query Frame = 3
Query:  525 IGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIV 794
            + +H  ++   IQ        E WL D     ++G +A TELGHG+N+  IET  TYD  T EFII+TP  +A K+W GG     TH ++
Sbjct:  112 LALHNLMFVPTIQNQADDEQTEWWLMDALQGKIIGTYAQTELGHGTNLGAIETTATYDKLTEEFIIHTPTTTATKWWPGGLGTSCTHVVL 201          
BLAST of CK935766 vs. ExPASy Swiss-Prot
Match: ACOX1_PHACI (Peroxisomal acyl-coenzyme A oxidase 1 OS=Phascolarctos cinereus GN=ACOX1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.088e-13
Identity = 32/77 (41.56%), Postives = 49/77 (63.64%), Query Frame = 3
Query:  573 TQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQ 803
            TQ   E++     N  ++G +A TE+GHG+++RG+ET  TYD  T EFI+N+P  ++ K+W GG    + H IV +Q
Sbjct:  116 TQEQQERFFIPAWNLEIIGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQ 192          
BLAST of CK935766 vs. ExPASy Swiss-Prot
Match: ACOX2_RABIT (Peroxisomal acyl-coenzyme A oxidase 2 OS=Oryctolagus cuniculus GN=ACOX2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.298e-12
Identity = 31/83 (37.35%), Postives = 52/83 (62.65%), Query Frame = 3
Query:  555 AIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQ 803
            A++  G++    KW    + + ++  +A TELGHG+ ++G+ET  TYDA T EF+I++P  +A K+W G     ATH ++ +Q
Sbjct:  125 ALRSLGSEEQIAKWEPLGKTFQIISTYAQTELGHGTYLQGLETEATYDAATQEFVIHSPTVTATKWWPGDLGRSATHALILAQ 207          
BLAST of CK935766 vs. ExPASy Swiss-Prot
Match: ACOX2_HUMAN (Peroxisomal acyl-coenzyme A oxidase 2 OS=Homo sapiens GN=ACOX2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.307e-12
Identity = 33/83 (39.76%), Postives = 52/83 (62.65%), Query Frame = 3
Query:  555 AIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQ 803
            A++  G++    KW    +N  ++  +A TELGHG+ ++G+ET  TYDA T EF+I++P  +A K+W G     ATH +V +Q
Sbjct:  125 ALRSLGSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYDAATQEFVIHSPTLTATKWWPGDLGRSATHALVQAQ 207          
BLAST of CK935766 vs. ExPASy Swiss-Prot
Match: ACOX2_MOUSE (Peroxisomal acyl-coenzyme A oxidase 2 OS=Mus musculus GN=Acox2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.253e-11
Identity = 31/82 (37.80%), Postives = 51/82 (62.20%), Query Frame = 3
Query:  555 AIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFS 800
            AI+  G+     KW +  +N+ ++  +A TELGHG+ ++G+ET  TYDA T EF+I++P  ++ K+W G      TH +V +
Sbjct:  125 AIRSLGSDEQIAKWGQLGKNFQIITTYAQTELGHGTYLQGLETEATYDATTQEFVIHSPTMTSIKWWPGDLGRTVTHAVVLA 206          
The following BLAST results are available for this feature:
BLAST of CK935766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
ACOX1_PONAB3.187e-1537.63Peroxisomal acyl-coenzyme A oxidase 1 OS=Pongo abe... [more]
ACOX1_HUMAN3.187e-1537.63Peroxisomal acyl-coenzyme A oxidase 1 OS=Homo sapi... [more]
ACOX1_DROME3.187e-1540.86Probable peroxisomal acyl-coenzyme A oxidase 1 OS=... [more]
ACOX1_DICDI1.211e-1455.38Peroxisomal acyl-coenzyme A oxidase 1 OS=Dictyoste... [more]
ACOX_CAEEL3.896e-1340.00Probable peroxisomal acyl-coenzyme A oxidase OS=Ca... [more]
ACOX1_PHACI5.088e-1341.56Peroxisomal acyl-coenzyme A oxidase 1 OS=Phascolar... [more]
ACOX2_RABIT3.298e-1237.35Peroxisomal acyl-coenzyme A oxidase 2 OS=Oryctolag... [more]
ACOX2_HUMAN4.307e-1239.76Peroxisomal acyl-coenzyme A oxidase 2 OS=Homo sapi... [more]
ACOX2_MOUSE1.253e-1137.80Peroxisomal acyl-coenzyme A oxidase 2 OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004390_H06 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935766 ID=CK935766; Name=CK935766; organism=Citrus sinensis; type=EST; length=805bp
GGGGAGGCTGAACACTCTTCGCTTTAATTTATTTATATCATCCTCTTTGG
TTAATTTAAGAAAAAAAGGAAAAAAAATAGAAAAGAAACAAAATGGATCG
CGCCATTCACAGAACCATAATCATCAAAAATCATCTCTTACAACCAAACT
CGGATCAAATTCTCACGACAAACGCGTGTCTGAGCTATTCCCCGCCGGAA
CTCAATGAAGTTTACGATTTTGACCTCAAGGAAATGCGGAAACTACTCGA
CGGCCACAACTTGCAAGAGCGGGACTGGCTGTTCAATCTCATGGTGCAGA
GCAAGCTGTTCAATCCGAGAAAAAGAGGAGAGAAGGTCTACGTGGCGCCT
GATTACAATCAGACGATGGAGCAGCAGCGAGAGATGACGATGAAGCGAAT
CTCGTATTTGCTTGAACGCAACGTTTTTGAAGGATGGCTTACTGCCAAAG
GAGCAGAAGCCGAGTTGAGAAAATTAGCGCTGCTTGAGGTCACCGGAATA
TTCGACCACTCGTTAGCGATTAAAATCGGTGTTCACTTCTTTTTATGGGG
AGGCGCCATTCAGTTTTTCGGTACACAGCGCCACCACGAGAAGTGGCTGA
GGGACACTGAAAATTATGTGGTCTTGGGTTGCTTTGCAATGACAGAATTG
GGCCACGGAAGTAATGTTCGAGGAATTGAAACTGTCACTACATATGATGC
AAATACGGGAGAGTTTATCATCAACACCCCCTGTGAATCAGCTCAGAAGT
ATTGGATCGGTGGGGCAGCTAATCATGCAACGCATACAATCGTCTTTTCA
CAGCT
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