CK935775

Overview
NameCK935775
Unique NameCK935775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935775 vs. ExPASy Swiss-Prot
Match: GAL1_ECO24 (Galactokinase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=galK PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.955e-17
Identity = 64/220 (29.09%), Postives = 101/220 (45.91%), Query Frame = 2
Query:  182 DNLNSKFIQVFAQPPDVYARCPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDIKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQXXVGGTFVVAHS 838
            +   S F   F  P     + PGRVNLIGEH DY    VLP AI   T+++    D ++   +      +D  N     +     +  +++QW +Y     +   ++++ +    G   G+D+++ G VP G+GLSSS +   +    L   + + +   +IA    E E QF+G   G MDQ IS + K   A LID   + T  V    G   V+ +S
Sbjct:    5 EKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDRKVRVM-----AADYENQLDEFSLDAPIVAHENYQWANY----VRGVVKHLQLRNNSFG---GVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS 212          
BLAST of CK935775 vs. ExPASy Swiss-Prot
Match: GAL1_SHISS (Galactokinase OS=Shigella sonnei (strain Ss046) GN=galK PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.859e-17
Identity = 64/220 (29.09%), Postives = 101/220 (45.91%), Query Frame = 2
Query:  182 DNLNSKFIQVFAQPPDVYARCPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDIKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQXXVGGTFVVAHS 838
            +   S F   F  P     + PGRVNLIGEH DY    VLP AI   T+++    D ++   +      +D  N     +     +  +++QW +Y     +   ++++ +    G   G+D+++ G VP G+GLSSS +   +    L   + + +   +IA    E E QF+G   G MDQ IS + K   A LID   + T  V    G   V+ +S
Sbjct:    5 EKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDRKVRVM-----AADYENQLDEFSLNAPIVAHENYQWANY----VRGVVKHLQLRNNSFG---GVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS 212          
BLAST of CK935775 vs. ExPASy Swiss-Prot
Match: GAL1_SHIFL (Galactokinase OS=Shigella flexneri GN=galK PE=3 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 3.859e-17
Identity = 64/220 (29.09%), Postives = 101/220 (45.91%), Query Frame = 2
Query:  182 DNLNSKFIQVFAQPPDVYARCPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDIKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQXXVGGTFVVAHS 838
            +   S F   F  P     + PGRVNLIGEH DY    VLP AI   T+++    D ++   +      +D  N     +     +  +++QW +Y     +   ++++ +    G   G+D+++ G VP G+GLSSS +   +    L   + + +   +IA    E E QF+G   G MDQ IS + K   A LID   + T  V    G   V+ +S
Sbjct:    5 EKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDRKVRVM-----AADYENQLDEFSLNAPIVAHENYQWANY----VRGVVKHLQLRNNSFG---GVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS 212          
BLAST of CK935775 vs. ExPASy Swiss-Prot
Match: GAL1_SHIF8 (Galactokinase OS=Shigella flexneri serotype 5b (strain 8401) GN=galK PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.859e-17
Identity = 64/220 (29.09%), Postives = 101/220 (45.91%), Query Frame = 2
Query:  182 DNLNSKFIQVFAQPPDVYARCPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDIKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQXXVGGTFVVAHS 838
            +   S F   F  P     + PGRVNLIGEH DY    VLP AI   T+++    D ++   +      +D  N     +     +  +++QW +Y     +   ++++ +    G   G+D+++ G VP G+GLSSS +   +    L   + + +   +IA    E E QF+G   G MDQ IS + K   A LID   + T  V    G   V+ +S
Sbjct:    5 EKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDRKVRVM-----AADYENQLDEFSLNAPIVAHENYQWANY----VRGVVKHLQLRNNSFG---GVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS 212          
BLAST of CK935775 vs. ExPASy Swiss-Prot
Match: GAL1_SHIBS (Galactokinase OS=Shigella boydii serotype 4 (strain Sb227) GN=galK PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.859e-17
Identity = 64/220 (29.09%), Postives = 101/220 (45.91%), Query Frame = 2
Query:  182 DNLNSKFIQVFAQPPDVYARCPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDIKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQXXVGGTFVVAHS 838
            +   S F   F  P     + PGRVNLIGEH DY    VLP AI   T+++    D ++   +      +D  N     +     +  +++QW +Y     +   ++++ +    G   G+D+++ G VP G+GLSSS +   +    L   + + +   +IA    E E QF+G   G MDQ IS + K   A LID   + T  V    G   V+ +S
Sbjct:    5 EKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDRKVRVM-----AADYENQLDEFSLNAPIVAHENYQWANY----VRGVVKHLQLRNNSFG---GVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS 212          
BLAST of CK935775 vs. ExPASy Swiss-Prot
Match: GAL1_ROSCS (Galactokinase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=galK PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.859e-17
Identity = 70/199 (35.18%), Postives = 103/199 (51.76%), Query Frame = 2
Query:  188 LNSKFIQVFAQPPDVYARCPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIR-KHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDIKHHQWGHYFICGYKAFYEYVKAKGLDVG--PPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QFIGTQSGGMDQAISIMAKSGFAELID 772
            L ++F Q +   P V  R PGRVNLIGEH DY    V P+AI + T VA R +HD     +++++A+ SD     T+  +   +I+  +  W H +I G         A  L V   P +G D+L+   VP G+GLSSS A   +   A      + +  +E+A L    E  F+G Q G MDQ I+++ ++  A LID
Sbjct:    7 LRARFQQHYGIHPSVIVRAPGRVNLIGEHTDYNDGFVFPVAIDRATYVAARLRHD-----QLVRVAS-SDLNEEDTFAID---QIERSNRPW-HNYIRGV--------ALALRVAGHPLLGADLLIASDVPRGAGLSSSAALEVAVGYAFQVLNNLNILGEELALLAQGAENNFVGVQCGIMDQLIAVLGRADHALLID 187          
BLAST of CK935775 vs. ExPASy Swiss-Prot
Match: GAL1_ECOSM (Galactokinase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=galK PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.859e-17
Identity = 64/220 (29.09%), Postives = 101/220 (45.91%), Query Frame = 2
Query:  182 DNLNSKFIQVFAQPPDVYARCPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDIKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQXXVGGTFVVAHS 838
            +   S F   F  P     + PGRVNLIGEH DY    VLP AI   T+++    D ++   +      +D  N     +     +  + +QW +Y     +   ++++ +  + G   G+D+++ G VP G+GLSSS +   +    L   + + +   +IA    E E QF+G   G MDQ IS + K   A LID   + T  V    G   V+ +S
Sbjct:    5 EKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDRKVRVM-----AADYENQLDEFSLDAPIVAHESYQWANY----VRGVVKHLQLRNNNFG---GVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS 212          
BLAST of CK935775 vs. ExPASy Swiss-Prot
Match: GAL1_CITK8 (Galactokinase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=galK PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.859e-17
Identity = 66/221 (29.86%), Postives = 98/221 (44.34%), Query Frame = 2
Query:  182 DNLNSKFIQVFAQPPDVYARCPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHDSKEAEKV-LKIANVSDKYNMCTYPAEPDQEIDIKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQXXVGGTFVVAHS 838
            +   S F ++F  P     + PGRVNLIGEH DY    VLP AI   T+++    D ++   +     N  D++++       D +      QW +Y     K   +   A G       G D+++ G VP G+GLSSS +   +        + + +   +IA    E E QF+G   G MDQ IS + K   A LID   + T  V    G   V+ +S
Sbjct:    5 EKTQSLFAEIFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCATRDDRKVRVIAADYDNQVDEFSLDAPIVTHDSQ------QWSNYVRGVVKHLQKRNNAFG-------GADLVISGNVPQGAGLSSSASLEVAVGTVFQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLIDCRTLGTKAVSMPEGVAVVIINS 212          
BLAST of CK935775 vs. ExPASy Swiss-Prot
Match: GAL1_SALAR (Galactokinase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=galK PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.583e-17
Identity = 66/215 (30.70%), Postives = 96/215 (44.65%), Query Frame = 2
Query:  200 FIQVFAQPPDVYARCPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHDSKEAEKV-LKIANVSDKYNMCTYPAEPDQEIDIKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQXXVGGTFVVAHS 838
            F +VF  P     + PGRVNLIGEH DY    VLP AI   T+++    D +    +     N  D++++       D +      QW +Y     K   +   A G       G+D+++ G VP G+GLSSS +   +        + + +   +IA    E E QF+G   G MDQ IS + K   A LID   + T  V    G   V+ +S
Sbjct:   11 FAEVFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDRTVRVIAADYDNQVDEFSLDAPIVTHDSQ------QWSNYVRGVVKHLQQRNNAFG-------GVDMVISGNVPQGAGLSSSASLEVAVGTVFQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS 212          
BLAST of CK935775 vs. ExPASy Swiss-Prot
Match: GAL1_ECOLU (Galactokinase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=galK PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.583e-17
Identity = 64/220 (29.09%), Postives = 100/220 (45.45%), Query Frame = 2
Query:  182 DNLNSKFIQVFAQPPDVYARCPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKHDSKEAEKVLKIANVSDKYNMCTYPAEPDQEIDIKHHQWGHYFICGYKAFYEYVKAKGLDVGPPVGLDILVDGTVPTGSGLSSSTAFVCSSTVALMAAFGVEVPKKEIAQLTCECE-QFIGTQSGGMDQAISIMAKSGFAELIDFNPIRTTDVQXXVGGTFVVAHS 838
            +   S F   F  P     + PGRVNLIGEH DY    VLP AI   T+++    D  +   +      +D  N     +     +  +++QW +Y     +   ++++ +    G   G+D+++ G VP G+GLSSS +   +    L   + + +   +IA    E E QF+G   G MDQ IS + K   A LID   + T  V    G   V+ +S
Sbjct:    5 EKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDHKVRVM-----AADYENQLDEFSLDAPIVAHENYQWANY----VRGVVKHLQLRNNSFG---GVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINS 212          
The following BLAST results are available for this feature:
BLAST of CK935775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
GAL1_ECO242.955e-1729.09Galactokinase OS=Escherichia coli O139:H28 (strain... [more]
GAL1_SHISS3.859e-1729.09Galactokinase OS=Shigella sonnei (strain Ss046) GN... [more]
GAL1_SHIFL3.859e-1729.09Galactokinase OS=Shigella flexneri GN=galK PE=3 SV... [more]
GAL1_SHIF83.859e-1729.09Galactokinase OS=Shigella flexneri serotype 5b (st... [more]
GAL1_SHIBS3.859e-1729.09Galactokinase OS=Shigella boydii serotype 4 (strai... [more]
GAL1_ROSCS3.859e-1735.18Galactokinase OS=Roseiflexus castenholzii (strain ... [more]
GAL1_ECOSM3.859e-1729.09Galactokinase OS=Escherichia coli (strain SMS-3-5 ... [more]
GAL1_CITK83.859e-1729.86Galactokinase OS=Citrobacter koseri (strain ATCC B... [more]
GAL1_SALAR6.583e-1730.70Galactokinase OS=Salmonella arizonae (strain ATCC ... [more]
GAL1_ECOLU6.583e-1729.09Galactokinase OS=Escherichia coli O17:K52:H18 (str... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004390_G08 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935775 ID=CK935775; Name=CK935775; organism=Citrus sinensis; type=EST; length=868bp
GGGGGGTTGAAACAGACTTTTGAACTGTGGAATGTAACTGAATTGAGTAG
TCGACGGTCAAGTAAAGGTCAAACTAGAAAAAAAAATGGCGAGGCACGAA
GAATTACCAGTGCCGACTTTTTGGTCACTGAAGGCAGTGTACGGAGAAGG
ATTGCAGCTGGAAGAGGCTGAACGTCGTTTCGATAACTTGAATTCAAAGT
TCATTCAAGTCTTTGCTCAGCCTCCCGATGTCTACGCGCGATGTCCAGGG
AGAGTGAACTTGATTGGGGAGCATATTGATTATGAAGGATATTCTGTACT
GCCAATGGCGATTCGGCAAGACACAATCGTGGCAATAAGGAAGCACGATT
CAAAAGAGGCTGAAAAGGTTCTTAAAATAGCTAATGTTAGTGACAAGTAC
AATATGTGTACTTATCCTGCTGAACCTGATCAGGAAATTGACATAAAGCA
TCATCAATGGGGCCACTATTTCATTTGTGGATATAAAGCTTTTTATGAAT
ATGTTAAAGCTAAAGGATTGGATGTTGGTCCACCGGTTGGACTTGATATT
CTTGTTGATGGCACGGTTCCAACAGGTTCTGGGCTATCCAGCTCCACAGC
ATTTGTTTGCTCTTCAACGGTTGCTCTTATGGCTGCTTTCGGCGTGGAAG
TTCCAAAGAAAGAGATTGCGCAACTTACATGTGAATGTGAACAATTTATT
GGAACACAGTCTGGTGGAATGGACCAGGCAATCTCTATCATGGCCAAATC
TGGGTTTGCTGAGCTGATTGATTTCAACCCTATTCGAACAACTGATGTGC
AACNNNCTGTTGGAGGTACTTTTGTGGTAGCCCATTCTTTGGCAGAATCT
CTGAGGGCTGTTACTGCT
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