CK935777

Overview
NameCK935777
Unique NameCK935777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPIA_HELPJ (Peptidyl-prolyl cis-trans isomerase OS=Helicobacter pylori J99 GN=ppiA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.101e-11
Identity = 46/128 (35.94%), Postives = 62/128 (48.44%), Query Frame = 2
Query:  224 GRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSH------AGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKV 589
            G I + L+ +  P+ V NF  L           K   Y G  FHR+++GFV QGG    G G G         P+   K + +H       G +SM ++G D+ GSQFF+  V    LDGEH VFGK+
Sbjct:   27 GNITLELFYKDAPQAVSNFVTLA----------KEGFYNGLNFHRVIAGFVAQGG-CPYGTGTGG--------PEHRIKCEVAHNPNKHQRGSISMAHAGRDTGGSQFFLCFVDLPHLDGEHTVFGKI 135          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: CYP7_SCHPO (Peptidylprolyl isomerase cyp7 OS=Schizosaccharomyces pombe GN=cyp7 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.101e-11
Identity = 48/133 (36.09%), Postives = 67/133 (50.38%), Query Frame = 2
Query:  224 GRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENF-KIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAI 619
            G I I L+ + VPK   NF  LC             +Y G   HR+V  F+IQGGD   G G G +SIYG  F  E   +++    G+V M  +  + N SQFFIT       +G+  +FG+V+   DT+Y +
Sbjct:   22 GDIQIELWCKEVPKACRNFIQLCLEG----------YYDGTIVHRVVPEFLIQGGDPT-GTGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVVG--DTIYNV 141          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPIA_HELPY (Peptidyl-prolyl cis-trans isomerase OS=Helicobacter pylori GN=ppiA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.438e-11
Identity = 49/143 (34.27%), Postives = 68/143 (47.55%), Query Frame = 2
Query:  224 GRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSH------AGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKV--IQGMDTVYAIEGG 628
            G I + L+ +  P+ V NF  L           K   Y G  FHR+++GFV QGG    G G G         P    K + +H       G +SM ++G D+ GSQFF+  V    LDGEH VFGK+   +G+  +  I+ G
Sbjct:   28 GNIALELFYKDAPQAVSNFVTLA----------KEGFYNGLNFHRVIAGFVAQGG-CPYGTGTGG--------PGHRIKCEVAHNPNKHKRGSISMAHAGRDTGGSQFFLCFVDLPHLDGEHTVFGKITSAEGLSVLDKIKQG 151          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPIL4_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Aspergillus fumigatus GN=cyp6 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.204e-11
Identity = 58/171 (33.92%), Postives = 76/171 (44.44%), Query Frame = 2
Query:  212 EQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSD---SIYG-------GTFPDE-NFKIKHSHAGVVSMV----NSGPDSN--GSQFFITTV-KASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTI 670
            E  LG IVI L     PK  ENF  LC          K  +Y   P H +   F  Q GD +  D   SD   SI+G        TF  + + K+KH+  G VSM     +  PD     SQF +T      +LDG+  +FGKV++G D +  I G      G+P K + I
Sbjct:    6 ETSLGDIVIDLLVDESPKACENFLKLC----------KVKYYNFSPVHSVQKNFTFQTGDPLGPDSPESDGGSSIWGLLEGPVKRTFSLKLSPKLKHTERGTVSMATVPSSHDPDERLAASQFIVTLEDNLDYLDGKAAIFGKVVEGFDVLEKINGAFIDDQGRPLKDIRI 166          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPIL4_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Aspergillus oryzae GN=cyp6 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11
Identity = 57/171 (33.33%), Postives = 73/171 (42.69%), Query Frame = 2
Query:  212 EQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSD---SIYGGTF--PDENF------KIKHSHAGVVSMVN----SGPDSN--GSQFFITTVK-ASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTI 670
            E  LG IVI L     PK  ENF  LC          K  +Y   P H +   F  Q GD +  D   SD   SI+G     P   F      K+KH   G VSM        PD     SQF +T  +   +LDG+ V+FGKV++G D +  +        G+P K + I
Sbjct:    6 ETSLGDIVIDLLVDECPKACENFLKLC----------KVKYYNFSPVHSVQKNFTFQTGDPLGPDSSESDGGSSIWGLLEGPPKRTFSLEPPPKLKHDERGTVSMATVPSPHDPDQRIAASQFIVTLGENLDYLDGKAVIFGKVVEGFDVLEKVNEAFIDDRGRPLKDIRI 166          
The following BLAST results are available for this feature:
BLAST of CK935777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
PPIA_HELPJ1.101e-1135.94Peptidyl-prolyl cis-trans isomerase OS=Helicobacte... [more]
CYP7_SCHPO1.101e-1136.09Peptidylprolyl isomerase cyp7 OS=Schizosaccharomyc... [more]
PPIA_HELPY1.438e-1134.27Peptidyl-prolyl cis-trans isomerase OS=Helicobacte... [more]
PPIL4_ASPFU3.204e-1133.92Peptidyl-prolyl cis-trans isomerase-like 4 OS=Aspe... [more]
PPIL4_ASPOR9.322e-1133.33Peptidyl-prolyl cis-trans isomerase-like 4 OS=Aspe... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004390_G10 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935777 ID=CK935777; Name=CK935777; organism=Citrus sinensis; type=EST; length=743bp
GGGGGCTGATTTTACCGTTAGAAAGCAAAAGAGACGCCTCGAAACGATGC
GTAGAGAGATCTCGGGCTTCGTTCGGACGCGATATCTTCTACTTTTTGTT
CTCATCTTTGTCTTTCTCATTGCCGCTTTCAGTAGTCGCAGAAAGGAAGA
AGAGAAGGAGGAAGATGTGTTTGAAATTACACATAGAGTATACTTGGATG
TTGATATAGAAGAGCAACGTTTAGGTAGAATTGTTATTGGATTGTATGGC
CAAGTTGTACCAAAAACTGTTGAAAATTTCAGGGCTTTATGCACAGGAGA
AAAAGGCACTGGGGCAAGTGGGAAACCTCTGCACTATAAGGGAAAACCAT
TCCATCGTATTGTATCTGGGTTTGTGATTCAAGGTGGAGATATAGTCCGT
GGTGATGGCAAGGGAAGTGACTCTATATATGGTGGCACTTTTCCTGATGA
GAACTTTAAGATTAAACACTCACATGCAGGTGTTGTTTCCATGGTGAATT
CAGGACCTGATTCCAATGGCTCTCAATTCTTCATCACCACTGTCAAGGCC
AGCTGGTTGGATGGGGAGCATGTCGTCTTCGGGAAGGTTATTCAAGGCAT
GGACACTGTGTATGCTATTGAAGGTGGAGCTGGAACTTACAGTGGAAAAC
CAAGAAAGAAAGTCACTATTGCTGACTCAGGAGAGTTACCCAAGAACAAG
TGGGATGAGGAAAGGTGAGGATCCTCGATTGTATTTACAACGA
back to top