CK935777

Overview
NameCK935777
Unique NameCK935777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPIC_BOVIN (Peptidyl-prolyl cis-trans isomerase C OS=Bos taurus GN=PPIC PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.502e-50
Identity = 99/171 (57.89%), Postives = 123/171 (71.93%), Query Frame = 2
Query:  176 ITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEL 688
            +T +V+ DV I ++ +GRIVIGL+G+VVPKTVENF AL TGEKG G       YKG  FHR++  F+IQGGD  RGDG G  SIYG TFPDENFK+KH   G VSM N+GPD+NGSQFFIT  K +WLDG+HVVFGKV+ GM  V++IE  A     +P    +I +SG++
Sbjct:   36 VTAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDFTRGDGTGGISIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIELQATDGHDRPFTDCSIVNSGKI 199          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPIB_RAT (Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=2 SV=3)

HSP 1 Score: 197.978 bits (502), Expect = 4.573e-50
Identity = 97/176 (55.11%), Postives = 119/176 (67.61%), Query Frame = 2
Query:  173 EITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGELPKNK 700
            ++T +VY D  I ++ +GR+  GL+G+ VPKTV+NF AL TGEKG G       YK   FHR++  F+IQGGD  RGDG G  SIYG  FPDENFK+KH   G VSM N+G D+NGSQFFITTVK SWLDG+HVVFGKV++GMD V  +E        KP K V I D G++   K
Sbjct:   41 KVTVKVYFDFQIGDEPVGRVTFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVIIVDCGKIEVEK 209          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPIB_HUMAN (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 4.573e-50
Identity = 96/176 (54.55%), Postives = 122/176 (69.32%), Query Frame = 2
Query:  173 EITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGELPKNK 700
            ++T +VY D+ I ++ +GR++ GL+G+ VPKTV+NF AL TGEKG G       YK   FHR++  F+IQGGD  RGDG G  SIYG  FPDENFK+KH   G VSM N+G D+NGSQFFITTVK +WLDG+HVVFGKV++GM+ V  +E        KP K V IAD G++   K
Sbjct:   41 KVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKIEVEK 209          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: CYP6_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizopus oryzae GN=cyp6 PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.573e-50
Identity = 92/168 (54.76%), Postives = 115/168 (68.45%), Query Frame = 2
Query:  185 RVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEL 688
            +V+ D+ +  Q  GR+   L+   VPKT ENFRALCTGEKG G SGKPLHYK   FHRI+ GF+ QGGD   GDG+G +SIYG TF DENF +KH   G++SM N+GP++NGSQFFIT V   WLDG H VFG+++ G   +  +E   G+ SG P  K+ I D GEL
Sbjct:    8 KVFFDIAVNGQHSGRMTFKLFSDTVPKTAENFRALCTGEKGKGISGKPLHYKNSYFHRIIPGFMAQGGDFTMGDGRGGESIYGRTFKDENFTLKHKGKGLLSMANAGPNTNGSQFFITFVDTPWLDGNHTVFGQIVDGSKVLDLLE-QHGSRSGMPSAKIEITDCGEL 174          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.973e-50
Identity = 92/168 (54.76%), Postives = 117/168 (69.64%), Query Frame = 2
Query:  185 RVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEL 688
            +V+ D+ I     GR+V+ L+    PKT ENFRALCTGEKG G  GKPLHYKG  FHR++ GF+ QGGD   G+G G +SIYG  F DENF  KH+  G++SM N+GP +NGSQFFI T K  WL+G+HVVFG+V++GMD +   E   G+ SG+  K V IAD G+L
Sbjct:    5 KVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVVEGMDVIKKAE-AVGSSSGRCSKPVVIADCGQL 171          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPIA_DICDI (Peptidyl-prolyl cis-trans isomerase A OS=Dictyostelium discoideum GN=ppiA PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.331e-49
Identity = 94/168 (55.95%), Postives = 116/168 (69.05%), Query Frame = 2
Query:  185 RVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEL 688
            RV+ D+ I     G++V+ LY   VPKT ENFRALCTGEKG G SGKPL YKG  FHR+++ F+ QGGD   G+G G +SIYG  F DENFK+KH   G +SM N+G ++NGSQFFI      WLDG+HVVFG V +GMD V  +E  AG+ SGK  K V IA+ G+L
Sbjct:   13 RVFFDITIGGVEAGKVVMELYANTVPKTAENFRALCTGEKGIGKSGKPLSYKGSSFHRVITNFMCQGGDFTMGNGTGGESIYGNKFADENFKLKHFGQGTLSMANAGANTNGSQFFICVAPTDWLDGKHVVFGFVTEGMDVVKKME-AAGSQSGKTTKPVVIANCGQL 179          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPID_MOUSE (40 kDa peptidyl-prolyl cis-trans isomerase OS=Mus musculus GN=Ppid PE=1 SV=3)

HSP 1 Score: 196.052 bits (497), Expect = 1.738e-49
Identity = 97/169 (57.40%), Postives = 121/169 (71.60%), Query Frame = 2
Query:  185 RVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGAS-GKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEL 688
            RV+ DVDI  +R+GRIV+ L+  +VPKT ENFRALCTGEKGTG++ GKPLH+KG PFHRI+  F+IQGGD    +G G +SIYG  F DENF  KH   G++SM N+GP++NGSQFFITTV    LDG+HVVFG+VI+G+     +E        KP K   IA+ GEL
Sbjct:   17 RVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGTGSTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARTLE-NVEVNGEKPAKLCVIAECGEL 184          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPIB_SCHPO (Peptidyl-prolyl cis-trans isomerase B OS=Schizosaccharomyces pombe GN=cyp4 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.738e-49
Identity = 95/180 (52.78%), Postives = 120/180 (66.67%), Query Frame = 2
Query:  173 EITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGELPKNKWDEE 712
            ++T  VY D+   ++ LGR+ IGL+G+ VPKT ENFRAL TGEKG G       Y+G  FHR++  F+IQGGDI +GDG G  SIYG  FPDENFK+ H   G++SM N+GPDSNGSQFFITTVK  WLDG HVVFG+V+ G D V  I         KP + V I  SG+L +   +++
Sbjct:   24 KVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFG-------YEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKISKAETDNRDKPLEDVKIIKSGQLSQENVEDD 196          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPID_RAT (40 kDa peptidyl-prolyl cis-trans isomerase OS=Rattus norvegicus GN=Ppid PE=1 SV=3)

HSP 1 Score: 195.667 bits (496), Expect = 2.270e-49
Identity = 98/175 (56.00%), Postives = 124/175 (70.86%), Query Frame = 2
Query:  185 RVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTG-ASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGELPK-NKW 703
            RV+ DVDI  +R+GRIV+ L+  +VPKT ENFRALCTGEKGTG  +GKPLH+KG PFHRI+  F+IQGGD    +G G +SIYG  F DENF  KH   G++SM N+GP++NGSQFFITTV    LDG+HVVFG+VI+G+     +E        KP K   IA+ GEL + ++W
Sbjct:   17 RVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGTGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARMLE-NVEVNGEKPAKLCVIAECGELKEGDEW 190          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: CYP40_ARATH (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana GN=CYP40 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.270e-49
Identity = 97/175 (55.43%), Postives = 122/175 (69.71%), Query Frame = 2
Query:  185 RVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGAS-GKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGELPKNKWD 706
            + ++D+ I  +  GRIVI LY  VVPKT ENFR LCTGEKG G + G PLHYKG  FHR++ GF+IQGGDI   DG G +SIYG  F DENF++KH   G++SM NSGP++NGSQFFITT + S LDG+HVVFG+V +GM  V +IE  +      P + V I D GE+P+   D
Sbjct:    5 KCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQDVVIHDCGEIPEGADD 179          
The following BLAST results are available for this feature:
BLAST of CK935777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
PPIC_BOVIN3.502e-5057.89Peptidyl-prolyl cis-trans isomerase C OS=Bos tauru... [more]
PPIB_RAT4.573e-5055.11Peptidyl-prolyl cis-trans isomerase B OS=Rattus no... [more]
PPIB_HUMAN4.573e-5054.55Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]
CYP6_RHIOR4.573e-5054.76Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizop... [more]
CYPH_SOLLC5.973e-5054.76Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
PPIA_DICDI1.331e-4955.95Peptidyl-prolyl cis-trans isomerase A OS=Dictyoste... [more]
PPID_MOUSE1.738e-4957.4040 kDa peptidyl-prolyl cis-trans isomerase OS=Mus ... [more]
PPIB_SCHPO1.738e-4952.78Peptidyl-prolyl cis-trans isomerase B OS=Schizosac... [more]
PPID_RAT2.270e-4956.0040 kDa peptidyl-prolyl cis-trans isomerase OS=Ratt... [more]
CYP40_ARATH2.270e-4955.43Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004390_G10 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935777 ID=CK935777; Name=CK935777; organism=Citrus sinensis; type=EST; length=743bp
GGGGGCTGATTTTACCGTTAGAAAGCAAAAGAGACGCCTCGAAACGATGC
GTAGAGAGATCTCGGGCTTCGTTCGGACGCGATATCTTCTACTTTTTGTT
CTCATCTTTGTCTTTCTCATTGCCGCTTTCAGTAGTCGCAGAAAGGAAGA
AGAGAAGGAGGAAGATGTGTTTGAAATTACACATAGAGTATACTTGGATG
TTGATATAGAAGAGCAACGTTTAGGTAGAATTGTTATTGGATTGTATGGC
CAAGTTGTACCAAAAACTGTTGAAAATTTCAGGGCTTTATGCACAGGAGA
AAAAGGCACTGGGGCAAGTGGGAAACCTCTGCACTATAAGGGAAAACCAT
TCCATCGTATTGTATCTGGGTTTGTGATTCAAGGTGGAGATATAGTCCGT
GGTGATGGCAAGGGAAGTGACTCTATATATGGTGGCACTTTTCCTGATGA
GAACTTTAAGATTAAACACTCACATGCAGGTGTTGTTTCCATGGTGAATT
CAGGACCTGATTCCAATGGCTCTCAATTCTTCATCACCACTGTCAAGGCC
AGCTGGTTGGATGGGGAGCATGTCGTCTTCGGGAAGGTTATTCAAGGCAT
GGACACTGTGTATGCTATTGAAGGTGGAGCTGGAACTTACAGTGGAAAAC
CAAGAAAGAAAGTCACTATTGCTGACTCAGGAGAGTTACCCAAGAACAAG
TGGGATGAGGAAAGGTGAGGATCCTCGATTGTATTTACAACGA
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