CK935777

Overview
NameCK935777
Unique NameCK935777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.056e-49
Identity = 93/168 (55.36%), Postives = 114/168 (67.86%), Query Frame = 2
Query:  185 RVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEL 688
            RVY D+ I  + +GRI + LY  +VPKT +NFR+LCTGEKG G SGKPLHYKG  FHR++  F+IQGGD   GDG G +SIYG  F DE F IKH    ++SM N+GP++NGSQFFITTV    LDG+HVVFG+V+ G   V  IE        +P K+  I D GEL
Sbjct:   12 RVYFDISIGGKSVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVLNGKSVVRQIENLTTQSGDRPAKEALIVDCGEL 179          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPIC_MOUSE (Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus GN=Ppic PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.604e-49
Identity = 98/171 (57.31%), Postives = 120/171 (70.18%), Query Frame = 2
Query:  176 ITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEL 688
            +T +V+ DV I ++ +GRIVIGL+G VVPKTVENF AL TGEKG G       YKG  FHR++  F+IQGGD    DG G  SIYG TFPDENFK+KH   G VSM N+GPD+NGSQFFIT  K +WLDG+HVVFGKV+ GM  V++IE  A     +P    TI +SG++
Sbjct:   36 VTDKVFFDVRIGDKDVGRIVIGLFGNVVPKTVENFVALATGEKGYG-------YKGSIFHRVIKDFMIQGGDFTARDGTGGMSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIELQATDGHDRPLTDCTIVNSGKI 199          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 194.126 bits (492), Expect = 6.604e-49
Identity = 92/168 (54.76%), Postives = 117/168 (69.64%), Query Frame = 2
Query:  185 RVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEL 688
            +VY DV+ + Q +GR+V  LY  +VPKT ENFRALCTGEKG G       Y G PFHR++  F++QGGD   G+G G  SIYGG FPDENFK  H   G++SM N+GP++NGSQFFITTV   WLDG+HVVFG+V+ G D V  +E   G+ SG  + ++ +A SGEL
Sbjct:    3 QVYFDVEADGQPIGRVVFKLYNDIVPKTAENFRALCTGEKGFG-------YAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGKFPDENFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVDGYDIVKKVE-SLGSPSGATKARIVVAKSGEL 162          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.604e-49
Identity = 91/168 (54.17%), Postives = 119/168 (70.83%), Query Frame = 2
Query:  185 RVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEL 688
            +VY D+ +  +  GRIV+ LY    P+T ENFRALCTGE+G G  GKPLHYKG  FHR++  F+ QGGD   G+G G +SIYG  F DENF  KH+  G++SM N+G ++NGSQFFI T K SWLDG+HVVFG+V++G++ V  IE   G+ SG+  K V IAD G++
Sbjct:    6 KVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIE-KVGSDSGRTSKPVVIADCGQI 172          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPIB_ARTBE (Peptidyl-prolyl cis-trans isomerase B OS=Arthroderma benhamiae GN=CPR2 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.126e-48
Identity = 94/172 (54.65%), Postives = 119/172 (69.19%), Query Frame = 2
Query:  173 EITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEL 688
            +IT +VY D++ + Q LGRIV+GLYG+ VPKT ENFRAL TGEKG G       Y+G  FHR++  F+IQGGD   GDG G  SIYG  F DENFK++H+  GV+SM N+G D+NGSQFFITT   +WLDG+HVVFG+V++G D V  I+     +  +P K V I   GEL
Sbjct:   32 KITSKVYFDIEHDGQPLGRIVMGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKDFMIQGGDFTNGDGTGGKSIYGNKFEDENFKLRHTKKGVLSMANAGKDTNGSQFFITTAITAWLDGKHVVFGEVLEGYDIVDKIQVVPKGFQDRPTKDVKIVKCGEL 196          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.126e-48
Identity = 96/173 (55.49%), Postives = 120/173 (69.36%), Query Frame = 2
Query:  173 EITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGELP 691
            ++T++VY DV+I  +  GRIV+GL+G+VVPKTVENFRALCTGEK  G       YKG  FHRI+  F+IQGGD   G+G G  SIYG  F DENF +KH+  G++SM N+GP++NGSQFFI TVK SWLD +HVVFG+VI+GM  V  +E         P+K   I   GELP
Sbjct:   92 KVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYG-------YKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKKGCRIYACGELP 257          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPIB_EMENI (Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans GN=cpr2 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.471e-48
Identity = 93/172 (54.07%), Postives = 120/172 (69.77%), Query Frame = 2
Query:  173 EITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEL 688
            +IT++VY D+   ++ LGRIV+GLYG+ VP+T ENFRAL TGEKG G       Y+G  FHR++  F+IQGGD  RGDG G  SIYG  F DENFK++H+  G++SM N+G D+NGSQFFITT    WLDG+HVVFG+V++G D V  I+      + +P K V I  SGEL
Sbjct:   31 KITNKVYFDIQHGDESLGRIVLGLYGKTVPETAENFRALATGEKGFG-------YEGSNFHRVIKDFMIQGGDFTRGDGTGGKSIYGAKFKDENFKLRHTKTGLLSMANAGKDTNGSQFFITTAVTPWLDGKHVVFGEVLEGYDIVDKIQNVPKGRNDRPLKDVKIVKSGEL 195          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.509e-48
Identity = 94/167 (56.29%), Postives = 116/167 (69.46%), Query Frame = 2
Query:  188 VYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEL 688
            VY D++   + LGR+V+GLYG+ VPKT ENFRAL TGEKG G       Y+G  FHR++  F+IQGGD  RGDG G  SIYG  F DENFKI+H+  G++SM N+G D+NGSQFFITTV   WLDG HVVFG+V++G + V AIE        KP++ V I  SGEL
Sbjct:   22 VYFDIEHGNKPLGRVVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKEFMIQGGDFTRGDGTGGKSIYGEKFKDENFKIRHTKKGLLSMANAGKDTNGSQFFITTVATPWLDGRHVVFGEVLEGYEVVEAIENVPKVPGDKPQQVVKIVKSGEL 181          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.509e-48
Identity = 93/172 (54.07%), Postives = 120/172 (69.77%), Query Frame = 2
Query:  173 EITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGEL 688
            +IT +V+ D++  ++ LGR+V+GLYG+ VPKT ENFRAL TGEKG G       Y+G  FHR++  F+IQGGD  RGDG G  SIYG  F DENFK++H+  G++SM N+G D+NGSQFFITTV   WLDG HVVFG+V++G + V  IE      S +P + V I  SGEL
Sbjct:   32 KITSKVFFDIEHGDKPLGRVVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKDFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEIVAQIENVPKGRSDRPVETVKIVKSGEL 196          
BLAST of CK935777 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.280e-48
Identity = 90/173 (52.02%), Postives = 120/173 (69.36%), Query Frame = 2
Query:  173 EITHRVYLDVDIEEQRLGRIVIGLYGQVVPKTVENFRALCTGEKGTGASGKPLHYKGKPFHRIVSGFVIQGGDIVRGDGKGSDSIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIQGMDTVYAIEGGAGTYSGKPRKKVTIADSGELP 691
            ++T +V+ D++++ + L RI+IGL+G+ VPKTVENF+ L  G +     G+   YKG  FHR++  F+IQGGD    DG G  SIYG  FPDENFK++H  AG +SM N+GPD+NGSQFFITTVK SWLDG+HVVFGKV++GM+ V  IE        +P K + IA  G +P
Sbjct:   29 KVTDKVFFDIEVDGKPLARIIIGLFGKTVPKTVENFKQLSIGTQLK--DGRTASYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGDRFPDENFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKVVEGMNIVRQIESETTDSRDRPVKSIKIASCGHIP 199          
The following BLAST results are available for this feature:
BLAST of CK935777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
PPID_GIBZE5.056e-4955.36Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
PPIC_MOUSE6.604e-4957.31Peptidyl-prolyl cis-trans isomerase C OS=Mus muscu... [more]
CYPH_YEAST6.604e-4954.76Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]
CP19A_ARATH6.604e-4954.17Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Ara... [more]
PPIB_ARTBE1.126e-4854.65Peptidyl-prolyl cis-trans isomerase B OS=Arthroder... [more]
CP20C_ARATH1.126e-4855.49Peptidyl-prolyl cis-trans isomerase CYP20-3, chlor... [more]
PPIB_EMENI1.471e-4854.07Peptidyl-prolyl cis-trans isomerase B OS=Emericell... [more]
PPIB_ASPOR2.509e-4856.29Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_ASPNG2.509e-4854.07Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_SCHMA4.280e-4852.02Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004390_G10 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935777 ID=CK935777; Name=CK935777; organism=Citrus sinensis; type=EST; length=743bp
GGGGGCTGATTTTACCGTTAGAAAGCAAAAGAGACGCCTCGAAACGATGC
GTAGAGAGATCTCGGGCTTCGTTCGGACGCGATATCTTCTACTTTTTGTT
CTCATCTTTGTCTTTCTCATTGCCGCTTTCAGTAGTCGCAGAAAGGAAGA
AGAGAAGGAGGAAGATGTGTTTGAAATTACACATAGAGTATACTTGGATG
TTGATATAGAAGAGCAACGTTTAGGTAGAATTGTTATTGGATTGTATGGC
CAAGTTGTACCAAAAACTGTTGAAAATTTCAGGGCTTTATGCACAGGAGA
AAAAGGCACTGGGGCAAGTGGGAAACCTCTGCACTATAAGGGAAAACCAT
TCCATCGTATTGTATCTGGGTTTGTGATTCAAGGTGGAGATATAGTCCGT
GGTGATGGCAAGGGAAGTGACTCTATATATGGTGGCACTTTTCCTGATGA
GAACTTTAAGATTAAACACTCACATGCAGGTGTTGTTTCCATGGTGAATT
CAGGACCTGATTCCAATGGCTCTCAATTCTTCATCACCACTGTCAAGGCC
AGCTGGTTGGATGGGGAGCATGTCGTCTTCGGGAAGGTTATTCAAGGCAT
GGACACTGTGTATGCTATTGAAGGTGGAGCTGGAACTTACAGTGGAAAAC
CAAGAAAGAAAGTCACTATTGCTGACTCAGGAGAGTTACCCAAGAACAAG
TGGGATGAGGAAAGGTGAGGATCCTCGATTGTATTTACAACGA
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