CK935783

Overview
NameCK935783
Unique NameCK935783
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF1_SOLTU (ADP-ribosylation factor 1 OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 338.191 bits (866), Expect = 3.010e-92
Identity = 168/180 (93.33%), Postives = 172/180 (95.56%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 638
            MGLT +KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRV EAR+EL RML EDEL DAVLLVFANKQDLPNAMNA EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSN I ++
Sbjct:    1 MGLTISKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNQIRNQ 180
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF2_RAT (ADP-ribosylation factor 2 OS=Rattus norvegicus GN=Arf2 PE=2 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 4.974e-87
Identity = 158/180 (87.78%), Postives = 166/180 (92.22%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 638
            MG  F KLF  LF KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDEL DAVLLVF NKQDLPNAMNA EITDKLGLHSLRQR+WYIQ+TCATSG+GLYEGLDWLSN + ++
Sbjct:    1 MGNVFEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKNQ 180
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF2_MOUSE (ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 PE=1 SV=2)

HSP 1 Score: 320.857 bits (821), Expect = 4.974e-87
Identity = 158/180 (87.78%), Postives = 166/180 (92.22%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 638
            MG  F KLF  LF KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDEL DAVLLVF NKQDLPNAMNA EITDKLGLHSLRQR+WYIQ+TCATSG+GLYEGLDWLSN + ++
Sbjct:    1 MGNVFEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKNQ 180
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF2_BOVIN (ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE=2 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 4.974e-87
Identity = 158/180 (87.78%), Postives = 166/180 (92.22%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 638
            MG  F KLF  LF KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDEL DAVLLVF NKQDLPNAMNA EITDKLGLHSLRQR+WYIQ+TCATSG+GLYEGLDWLSN + ++
Sbjct:    1 MGNVFEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDWLSNQLKNQ 180
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF_CRYNE (ADP-ribosylation factor OS=Cryptococcus neoformans GN=ARF PE=1 SV=3)

HSP 1 Score: 318.161 bits (814), Expect = 3.224e-86
Identity = 154/181 (85.08%), Postives = 168/181 (92.82%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 641
            MGL+ +KL + LF KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQG+IFVVDSNDR+R+ EAR+EL RML+EDEL DA+LLVFANKQDLPNAMNA EITDKLGLHSLRQR WYIQ+ CATSG+GLYEGL+WLS N+  K+
Sbjct:    1 MGLSVSKLLNGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERITEAREELQRMLSEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSLRQRSWYIQAACATSGDGLYEGLEWLSANLKRKS 181
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF1_XENLA (ADP-ribosylation factor 1 OS=Xenopus laevis GN=arf1 PE=2 SV=2)

HSP 1 Score: 318.161 bits (814), Expect = 3.224e-86
Identity = 157/180 (87.22%), Postives = 165/180 (91.67%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 638
            MG  F  LF  LF KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDEL DAVLLVFANKQDLPNAMNA EITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN + ++
Sbjct:    1 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ 180
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF1_RAT (ADP-ribosylation factor 1 OS=Rattus norvegicus GN=Arf1 PE=1 SV=2)

HSP 1 Score: 318.161 bits (814), Expect = 3.224e-86
Identity = 157/180 (87.22%), Postives = 165/180 (91.67%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 638
            MG  F  LF  LF KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDEL DAVLLVFANKQDLPNAMNA EITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN + ++
Sbjct:    1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ 180
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF1_MOUSE (ADP-ribosylation factor 1 OS=Mus musculus GN=Arf1 PE=1 SV=2)

HSP 1 Score: 318.161 bits (814), Expect = 3.224e-86
Identity = 157/180 (87.22%), Postives = 165/180 (91.67%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 638
            MG  F  LF  LF KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDEL DAVLLVFANKQDLPNAMNA EITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN + ++
Sbjct:    1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ 180
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF1_MACFA (ADP-ribosylation factor 1 OS=Macaca fascicularis GN=ARF1 PE=2 SV=3)

HSP 1 Score: 318.161 bits (814), Expect = 3.224e-86
Identity = 157/180 (87.22%), Postives = 165/180 (91.67%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 638
            MG  F  LF  LF KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDEL DAVLLVFANKQDLPNAMNA EITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN + ++
Sbjct:    1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ 180
[Close]
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARF1_HUMAN (ADP-ribosylation factor 1 OS=Homo sapiens GN=ARF1 PE=1 SV=2)

HSP 1 Score: 318.161 bits (814), Expect = 3.224e-86
Identity = 157/180 (87.22%), Postives = 165/180 (91.67%), Query Frame = 3 
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 638
            MG  F  LF  LF KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RV EAR+EL RML EDEL DAVLLVFANKQDLPNAMNA EITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN + ++
Sbjct:    1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ 180
The following BLAST results are available for this feature:
BLAST of CK935783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARF1_SOLTU3.010e-9293.33ADP-ribosylation factor 1 OS=Solanum tuberosum PE=... [more]
ARF2_RAT4.974e-8787.78ADP-ribosylation factor 2 OS=Rattus norvegicus GN=... [more]
ARF2_MOUSE4.974e-8787.78ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 ... [more]
ARF2_BOVIN4.974e-8787.78ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE... [more]
ARF_CRYNE3.224e-8685.08ADP-ribosylation factor OS=Cryptococcus neoformans... [more]
ARF1_XENLA3.224e-8687.22ADP-ribosylation factor 1 OS=Xenopus laevis GN=arf... [more]
ARF1_RAT3.224e-8687.22ADP-ribosylation factor 1 OS=Rattus norvegicus GN=... [more]
ARF1_MOUSE3.224e-8687.22ADP-ribosylation factor 1 OS=Mus musculus GN=Arf1 ... [more]
ARF1_MACFA3.224e-8687.22ADP-ribosylation factor 1 OS=Macaca fascicularis G... [more]
ARF1_HUMAN3.224e-8687.22ADP-ribosylation factor 1 OS=Homo sapiens GN=ARF1 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004390_F09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935783 ID=CK935783; Name=CK935783; organism=Citrus sinensis; type=EST; length=773bp
GGGGCAAACCATTTTCCTTTCGACGAAGCTCTTTCTCTTGACTCGACNNN
NAACGGNAAAATCTAAATCCATCACAAGTTAATTAACAACAGCCAGAGAT
GGGATTGACGTTCACGAAGCTGTTTAGTCGGTTATTTGCGAAGAAGGAGA
TGCGAATTCTGATGGTGGGTCTCGACGCCGCCGGTAAGACCACTATTTTG
TACAAGCTTAAGCTCGGTGAGATCGTCACCACCATCCCTACAATCGGTTT
TAATGTGGAGACGGTTGAATACAAGAACATTAGCTTCACGGTTTGGGATG
TCGGAGGTCAGGACAAGATCCGTCCATTGTGGAGGCACTATTTTCAGAAC
ACTCAGGGCCTCATTTTTGTGGTGGATAGCAATGACAGGGATAGAGTAGT
TGAGGCAAGGGATGAGTTGCACCGAATGTTGAATGAGGATGAATTGGGGG
ATGCTGTTCTGCTTGTATTTGCTAACAAACAAGATCTTCCGAATGCAATG
AATGCTACAGAAATAACTGACAAGCTCGGTCTTCATTCTCTTCGCCAGCG
ACACTGGTATATCCAGAGCACATGTGCAACCTCTGGAGAGGGTCTTTACG
AAGGGTTGGATTGGCTTTCCAACAACATCGCTAGCAAGGCTTGAATGAAG
CAGTGAAGATTCTGGCTCCTCTTTTAGATTTCGTTATGGCTTATACCTAT
TCTAGGTATTCTGAAGAAGATAGTTTCCCTTTTGTTCAGTCACTTCTATA
ACAGCATAATGTTTGTTGAAAAT
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