CK935783

Overview
NameCK935783
Unique NameCK935783
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARFF_DICDI (ADP-ribosylation factor F OS=Dictyostelium discoideum GN=arrF PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.413e-49
Identity = 90/178 (50.56%), Postives = 125/178 (70.22%), Query Frame = 3
Query:  111 FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRML--NEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 638
            F  +FS    K+ +RILM+GLD AGK+T+LYKLK G+++ TIPTIGFNVE +EYKN+S  VWD+GGQ+ IR LWR Y Q T   IFVVDS DR+R  E + E+  ++  N++E  +A LL+FANKQD+ N +   E+ + L L+SL  + W++Q   A  G+G+YEG DW+ +N + K
Sbjct:   13 FVNIFSLFEGKRNIRILMIGLDGAGKSTLLYKLKFGDVIRTIPTIGFNVEIIEYKNLSMNVWDIGGQNNIRALWRQYDQRTDVFIFVVDSTDRERFDEVKQEIKNIIEQNKNESSNASLLIFANKQDMLNPITPAELVNSLDLNSLTNKKWHVQPCSAVRGDGIYEGFDWIVSNSSGK 190          
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARFD_DICDI (ADP-ribosylation factor D OS=Dictyostelium discoideum GN=arrD PE=3 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 3.152e-49
Identity = 87/177 (49.15%), Postives = 129/177 (72.88%), Query Frame = 3
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 629
            MG++ +  FS +F  K +++LM+GLD +GKTTILYKL L E+V+TI T+G+NVET+++K+++ T+WD+ G+++IR LW+ ++     +IFVVDS+DR R+ EA  EL +++ E+EL    LL+FA KQD  + M   E+TD+LGLH ++ R WY+Q T    G G+YEGLDWLS  I
Sbjct:    1 MGISSSNPFSSIFKSKAIKLLMLGLDGSGKTTILYKLMLNEVVSTISTLGYNVETIQHKHLNLTLWDLAGEERIRTLWKPFYNKCTAIIFVVDSSDRLRIDEAASELAKLMKEEELKGCSLLIFATKQDCISPMEIPELTDQLGLHDIKDRRWYVQPTRTLEGIGIYEGLDWLSTKI 177          
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARL5B_MOUSE (ADP-ribosylation factor-like protein 5B OS=Mus musculus GN=Arl5b PE=2 SV=3)

HSP 1 Score: 184.882 bits (468), Expect = 4.259e-46
Identity = 88/177 (49.72%), Postives = 125/177 (70.62%), Query Frame = 3
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 629
            MGL F KL+S LF  +E ++++VGLD AGKTTILY+  + E+V T PTIG NVE +  KN  F +WD+GGQ+ +R  W  Y+ NT+ +I VVDS DR+R+   ++EL+RML  ++L  A +L+FANKQD+   M A EI+  L L S++   W+IQS CA +GEGL +GL+W+++ I
Sbjct:    1 MGLIFAKLWS-LFCNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRI 176          
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARL5B_HUMAN (ADP-ribosylation factor-like protein 5B OS=Homo sapiens GN=ARL5B PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.259e-46
Identity = 88/177 (49.72%), Postives = 125/177 (70.62%), Query Frame = 3
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 629
            MGL F KL+S LF  +E ++++VGLD AGKTTILY+  + E+V T PTIG NVE +  KN  F +WD+GGQ+ +R  W  Y+ NT+ +I VVDS DR+R+   ++EL+RML  ++L  A +L+FANKQD+   M A EI+  L L S++   W+IQS CA +GEGL +GL+W+++ I
Sbjct:    1 MGLIFAKLWS-LFCNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRI 176          
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARL5A_MOUSE (ADP-ribosylation factor-like protein 5A OS=Mus musculus GN=Arl5a PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.709e-45
Identity = 84/177 (47.46%), Postives = 124/177 (70.06%), Query Frame = 3
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 629
            MG+ FT+++ RLF  +E ++++VGLD AGKTTILY+  + E+V T PTIG NVE +   N  F +WD+GGQ+ +RP W  Y+ NT+ +I VVDS DR+R+   R+EL++ML  ++L  A LL+FANKQD+   M   EI+  L L S++   W+IQ+ CA +GEGL +GL+W+ + +
Sbjct:    1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMWDIGGQESLRPSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176          
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARL5_DICDI (ADP-ribosylation factor-like protein 5 OS=Dictyostelium discoideum GN=arl5 PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.049e-44
Identity = 82/173 (47.40%), Postives = 123/173 (71.10%), Query Frame = 3
Query:  111 FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 629
            F  +++R F   E ++++VGL+AAGKTT LYKL L E+V+T PT+G N+E   Y+NI   +WD+GGQD +R  W  Y+ NTQ +I V+DS DR RV   ++EL +ML  + L  +++L++ANKQDL +AM+ TE++  L LHS++   ++IQ+ CA +G+GL  GLDWL ++I
Sbjct:    8 FASIWNRFFNNAEYKVIIVGLNAAGKTTTLYKLLLDEVVSTTPTVGSNLEEFVYRNIRLLMWDLGGQDLLRSTWNQYYINTQAVILVIDSTDRARVNLIKEELFKMLAHENLKKSIILIYANKQDLKDAMSPTELSTLLSLHSIKDHDYHIQACCALTGQGLESGLDWLVSHI 180          
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARL5A_RAT (ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus GN=Arl5a PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.987e-44
Identity = 83/177 (46.89%), Postives = 123/177 (69.49%), Query Frame = 3
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 629
            MG+ FT+++ RLF  +E ++++VGLD AGKTTILY+  + E+V T PTIG NVE +   N  F +WD+GGQ+ +R  W  Y+ NT+ +I VVDS DR+R+   R+EL++ML  ++L  A LL+FANKQD+   M   EI+  L L S++   W+IQ+ CA +GEGL +GL+W+ + +
Sbjct:    1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176          
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARL5A_HUMAN (ADP-ribosylation factor-like protein 5A OS=Homo sapiens GN=ARL5A PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.987e-44
Identity = 83/177 (46.89%), Postives = 123/177 (69.49%), Query Frame = 3
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 629
            MG+ FT+++ RLF  +E ++++VGLD AGKTTILY+  + E+V T PTIG NVE +   N  F +WD+GGQ+ +R  W  Y+ NT+ +I VVDS DR+R+   R+EL++ML  ++L  A LL+FANKQD+   M   EI+  L L S++   W+IQ+ CA +GEGL +GL+W+ + +
Sbjct:    1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176          
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARL5A_BOVIN (ADP-ribosylation factor-like protein 5A OS=Bos taurus GN=ARL5A PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.987e-44
Identity = 83/177 (46.89%), Postives = 123/177 (69.49%), Query Frame = 3
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 629
            MG+ FT+++ RLF  +E ++++VGLD AGKTTILY+  + E+V T PTIG NVE +   N  F +WD+GGQ+ +R  W  Y+ NT+ +I VVDS DR+R+   R+EL++ML  ++L  A LL+FANKQD+   M   EI+  L L S++   W+IQ+ CA +GEGL +GL+W+ + +
Sbjct:    1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKGCMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176          
BLAST of CK935783 vs. ExPASy Swiss-Prot
Match: ARL5_CAEEL (ADP-ribosylation factor-like protein 5 OS=Caenorhabditis elegans GN=arl-5 PE=2 SV=3)

HSP 1 Score: 177.563 bits (449), Expect = 6.800e-44
Identity = 86/178 (48.31%), Postives = 117/178 (65.73%), Query Frame = 3
Query:   99 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELGDAVLLVFANKQDLPNAMNATEITDKLGLHSLR-QRHWYIQSTCATSGEGLYEGLDWLSNNI 629
            MGL   KLF   +  K+ +I++VGLD AGKTTILY     + V T PTIG NVE V Y+N+ F +WD+GGQ+ +R  W  Y+  T  +I V+DS+D  R+   +++LH ML  ++L  A +LV ANKQDLP AMN  E++ +LGL +LR  R W I   CA  GEGL E L+W++NN+
Sbjct:    1 MGLIMAKLFQSWWIGKKYKIIVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVSYRNLDFVIWDIGGQESLRKSWSTYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLARAHILVLANKQDLPGAMNPAEVSTQLGLQTLRGARKWQINGCCAVKGEGLPEALEWIANNL 178          
The following BLAST results are available for this feature:
BLAST of CK935783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARFF_DICDI2.413e-4950.56ADP-ribosylation factor F OS=Dictyostelium discoid... [more]
ARFD_DICDI3.152e-4949.15ADP-ribosylation factor D OS=Dictyostelium discoid... [more]
ARL5B_MOUSE4.259e-4649.72ADP-ribosylation factor-like protein 5B OS=Mus mus... [more]
ARL5B_HUMAN4.259e-4649.72ADP-ribosylation factor-like protein 5B OS=Homo sa... [more]
ARL5A_MOUSE4.709e-4547.46ADP-ribosylation factor-like protein 5A OS=Mus mus... [more]
ARL5_DICDI1.049e-4447.40ADP-ribosylation factor-like protein 5 OS=Dictyost... [more]
ARL5A_RAT3.987e-4446.89ADP-ribosylation factor-like protein 5A OS=Rattus ... [more]
ARL5A_HUMAN3.987e-4446.89ADP-ribosylation factor-like protein 5A OS=Homo sa... [more]
ARL5A_BOVIN3.987e-4446.89ADP-ribosylation factor-like protein 5A OS=Bos tau... [more]
ARL5_CAEEL6.800e-4448.31ADP-ribosylation factor-like protein 5 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004390_F09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935783 ID=CK935783; Name=CK935783; organism=Citrus sinensis; type=EST; length=773bp
GGGGCAAACCATTTTCCTTTCGACGAAGCTCTTTCTCTTGACTCGACNNN
NAACGGNAAAATCTAAATCCATCACAAGTTAATTAACAACAGCCAGAGAT
GGGATTGACGTTCACGAAGCTGTTTAGTCGGTTATTTGCGAAGAAGGAGA
TGCGAATTCTGATGGTGGGTCTCGACGCCGCCGGTAAGACCACTATTTTG
TACAAGCTTAAGCTCGGTGAGATCGTCACCACCATCCCTACAATCGGTTT
TAATGTGGAGACGGTTGAATACAAGAACATTAGCTTCACGGTTTGGGATG
TCGGAGGTCAGGACAAGATCCGTCCATTGTGGAGGCACTATTTTCAGAAC
ACTCAGGGCCTCATTTTTGTGGTGGATAGCAATGACAGGGATAGAGTAGT
TGAGGCAAGGGATGAGTTGCACCGAATGTTGAATGAGGATGAATTGGGGG
ATGCTGTTCTGCTTGTATTTGCTAACAAACAAGATCTTCCGAATGCAATG
AATGCTACAGAAATAACTGACAAGCTCGGTCTTCATTCTCTTCGCCAGCG
ACACTGGTATATCCAGAGCACATGTGCAACCTCTGGAGAGGGTCTTTACG
AAGGGTTGGATTGGCTTTCCAACAACATCGCTAGCAAGGCTTGAATGAAG
CAGTGAAGATTCTGGCTCCTCTTTTAGATTTCGTTATGGCTTATACCTAT
TCTAGGTATTCTGAAGAAGATAGTTTCCCTTTTGTTCAGTCACTTCTATA
ACAGCATAATGTTTGTTGAAAAT
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