CK935792

Overview
NameCK935792
Unique NameCK935792
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: Y274_AQUAE (UPF0001 protein aq_274 OS=Aquifex aeolicus GN=aq_274 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.402e-35
Identity = 93/237 (39.24%), Postives = 141/237 (59.49%), Query Frame = 2
Query:  143 AVTALRSVLHRVRQAAERSGRTQEQIRVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKAPQLPE-DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAV--SNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPEN----FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 832
            A   L  VL R+++A ER+GR +   +++  SKT P  +IR+ Y+ G + +GEN VQE + K   L + D++WHF+G LQ+NK K L+G V    ++  +  + +A+ + K    +N+ +    VL++VN  GEE+K G++P +   + E+  L  PN++  GLMTI  P Y   PE+    FR L   R E+ +   +A     LSMGMS DFE AIE G+T VRIG+ +FG R+Y
Sbjct:    3 ACERLSRVLERIQKACERAGRGENCAKLLGASKTVPPEVIREFYNCGLKVYGENRVQEFLKKYEALKDLDLEWHFIGRLQTNKVKYLMGKVV---LIHSLDRKNLADEIQKRAFKNNIVQ---DVLIEVNVGGEETKGGVEPENLKELFEYT-LELPNVKVLGLMTI--PPYLENPEDVRPYFRKLRELRDELQREYNVALP--HLSMGMSHDFEVAIEEGATIVRIGTLLFGERKY 228          
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: Y090_HAEIN (UPF0001 protein HI0090 OS=Haemophilus influenzae GN=HI0090 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.392e-35
Identity = 92/235 (39.15%), Postives = 133/235 (56.60%), Query Frame = 2
Query:  155 LRSVLHRVRQAAERSGRTQEQIRVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKAPQLPE---DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMP-DYTSTPEN-FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKKQ 844
            L  +  ++  A +   R Q  ++++AVSKTKP+S I   Y AG  +FGENYVQE V+K         +++WHF+G LQSNK + +     + D ++ +   KIA+ L++      + PL VL+Q+N S EESKSGI P   L + +H+    P+L   GLM I  P D  +  EN FR +L    ++ + L   +    LSMGM+ D   AI+ GST VRIG+ IFG R Y+  Q
Sbjct:    7 LNLIQQKIETACKEENRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQEGVEKIQYFESQGINLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLNEQ-RPTNKAPLNVLIQINISDEESKSGIQPEEMLTLAKHIE-NLPHLCLRGLMAIPAPTDNIAEQENAFRKMLELFEQLKQVLPNQQID-TLSMGMTDDMPSAIKCGSTMVRIGTAIFGARNYSTSQ 235          
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: YBD6_YEAST (UPF0001 protein YBL036C OS=Saccharomyces cerevisiae GN=YBL036C PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.514e-33
Identity = 90/212 (42.45%), Postives = 128/212 (60.38%), Query Frame = 2
Query:  215 QIRVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKAPQLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNL--GRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRL--RCPNLEFSGLMTIGM--PDYTSTPEN--FRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPR 826
            +I ++ VSK KP S I+ +YD G R FGENYVQE+++KA  LP+DIKWHF+G LQ+NK K  L  VPNL  VE + + K A  L+++ +       P+   VQ+NTS E+ KSG++  + +  V    L   C  ++ +GLMTIG     +  + EN  F TL+  + ++    G +    +LSMGMS DF +AI  G+  VRIG+ IFG R
Sbjct:   41 KILLLVVSKLKPASDIQILYDHGVREFGENYVQELIEKAKLLPDDIKWHFIGGLQTNKCKD-LAKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSHEDQKSGLNNEAEIFEVIDFFLSEECKYIKLNGLMTIGSWNVSHEDSKENRDFATLVEWKKKIDAKFGTS---LKLSMGMSADFREAIRQGTAEVRIGTDIFGAR 248          
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: Y394_PSEAE (UPF0001 protein PA0394 OS=Pseudomonas aeruginosa GN=PA0394 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.111e-32
Identity = 90/227 (39.65%), Postives = 125/227 (55.07%), Query Frame = 2
Query:  155 LRSVLHRVRQAAERSGRTQEQIRVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKAPQLPE-DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIFGPREY 832
            +  V  R+R+AA+ +GR    + ++AVSKTKP + +R+ + AG R FGENY+QE + K  +L +  + WHF+G +QSNK + +     +   V  V   KIA  L +     G  PL V +QVN SGE SKSG  P     + E V+ + PNL   GLM I  P+ T+             E+   L +  D   LSMGMS D E AI  G+T VRIG+ +FG R+Y
Sbjct:    8 IAKVAARIREAAQAAGRDPATVGLLAVSKTKPAAAVREAHAAGLRDFGENYLQEALGKQAELADLPLNWHFIGPIQSNKTRPI---AEHFQWVHSVDRLKIAQRLSEQ-RPAGLPPLNVCLQVNVSGEASKSGCAPEDLPALAEAVK-QLPNLRLRGLMAI--PEPTAERAAQHAAFARLRELLLDLNLGLD--TLSMGMSDDLEAAIGEGATWVRIGTALFGARDY 225          
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: YGGS_ECOLI (UPF0001 protein yggS OS=Escherichia coli (strain K12) GN=yggS PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.895e-32
Identity = 97/237 (40.93%), Postives = 125/237 (52.74%), Query Frame = 2
Query:  155 LRSVLHRVRQAAERSGRTQEQIRVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKAPQLPE----DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKALGMAEDQCE---LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 841
            L  V  ++  AA R GR+ E+I ++AVSKTKP S I +  DAG R FGENYVQE VDK     E     ++WHF+G LQSNK++ +     + D    +   +IA  L D+  + L   PL VL+Q+N S E SKSGI  +    +   V    P L   GLM I  P+     E  R     R       G+         LS+GMS D E AI  GST VRIG+ IFG R+Y+KK
Sbjct:    8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQRPAEL--PPLNVLIQINISDENSKSGIQLAELDELAAAV-AELPRLRLRGLMAIPAPE----SEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYSKK 234          
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: YGGS_ECOL6 (UPF0001 protein yggS OS=Escherichia coli O6 GN=yggS PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.895e-32
Identity = 97/237 (40.93%), Postives = 125/237 (52.74%), Query Frame = 2
Query:  155 LRSVLHRVRQAAERSGRTQEQIRVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKAPQLPE----DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKALGMAEDQCE---LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 841
            L  V  ++  AA R GR+ E+I ++AVSKTKP S I +  DAG R FGENYVQE VDK     E     ++WHF+G LQSNK++ +     + D    +   +IA  L D+  + L   PL VL+Q+N S E SKSGI  +    +   V    P L   GLM I  P+     E  R     R       G+         LS+GMS D E AI  GST VRIG+ IFG R+Y+KK
Sbjct:    8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQRPAEL--PPLNVLIQINISDENSKSGIQLAELDELAAAV-AELPRLRLRGLMAIPAPE----SEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYSKK 234          
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: YGGS_ECO57 (UPF0001 protein yggS OS=Escherichia coli O157:H7 GN=yggS PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.895e-32
Identity = 97/237 (40.93%), Postives = 125/237 (52.74%), Query Frame = 2
Query:  155 LRSVLHRVRQAAERSGRTQEQIRVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKAPQLPE----DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHL-DKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIGMPDYTSTPENFRTLLNCRAEVCKALGMAEDQCE---LSMGMSGDFEQAIEMGSTSVRIGSTIFGPREYAKK 841
            L  V  ++  AA R GR+ E+I ++AVSKTKP S I +  DAG R FGENYVQE VDK     E     ++WHF+G LQSNK++ +     + D    +   +IA  L D+  + L   PL VL+Q+N S E SKSGI  +    +   V    P L   GLM I  P+     E  R     R       G+         LS+GMS D E AI  GST VRIG+ IFG R+Y+KK
Sbjct:    8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQRPAEL--PPLNVLIQINISDENSKSGIQLAELDELAAAV-AELPRLRLRGLMAIPAPE----SEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYSKK 234          
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: YLME_BACSU (UPF0001 protein ylmE OS=Bacillus subtilis GN=ylmE PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.455e-24
Identity = 77/228 (33.77%), Postives = 119/228 (52.19%), Query Frame = 2
Query:  146 VTALRSVLHRVRQAAERSGRTQEQIRVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKAPQLPEDIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTLLNCRAEVCKALGMAEDQC-ELSMGMSGDFEQAIEMGSTSVRIGSTIFG 820
            V  LR +  R+ +A  RSGR+ +++ V+AV+K       ++  DAG    GEN   E++ K   +  + +WHF+G LQS KAK+++  V  +  ++ +        L K +       ++  VQVNTS E SK G+     +  ++ +     ++  +GLMT+     D       FR+L   R +V K L      C ELSMGMS DFE AIE G+T +RIGS++ G
Sbjct:    4 VDNLRHINERINEACNRSGRSSDEVTVIAVTKYVSPERAQEAVDAGITCLGENRDAELLRKQELMKGNPEWHFIGSLQSRKAKSVVNSVSYIHSLDRLS-------LAKEIEKRAEGTVRCFVQVNTSLEPSKHGMKKEEVIPFIQELS-GFEHILVAGLMTMAPLTDDQDQIRSCFRSLRELRDQVQK-LNQPNAPCTELSMGMSNDFEIAIEEGATYIRIGSSLVG 222          
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: Y395_HELPY (UPF0001 protein HP_0395 OS=Helicobacter pylori GN=HP_0395 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.608e-23
Identity = 79/227 (34.80%), Postives = 114/227 (50.22%), Query Frame = 2
Query:  146 VTALRSVLHRVRQAAERSGRTQEQIRVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKAPQLPE-DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIF 817
            + AL + + + R A  R       +++VAVSK      I+  Y+   R+FGEN VQ++  K   L    ++WH +G LQ NK   LL   P L  +  + + K+A  ++K    LG   L  L+QVN++ EESKSG+ P   L I   +   C +L+  GLM IG    D     ++F T         K     ++   LSMGMS DFE AI  G+  +RIGS +F
Sbjct:    8 IDALITKIEKARTAYSR----HHIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKINALLSLKPAL--LHSLDSLKLALKIEKRCEILGVN-LNALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFIT-------TKKLFDQIKNASVLSMGMSDDFELAIACGANLLRIGSFLF 220          
BLAST of CK935792 vs. ExPASy Swiss-Prot
Match: Y395_HELPJ (UPF0001 protein jhp_0986 OS=Helicobacter pylori J99 GN=jhp_0986 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.583e-23
Identity = 74/203 (36.45%), Postives = 104/203 (51.23%), Query Frame = 2
Query:  218 IRVVAVSKTKPVSLIRQVYDAGHRSFGENYVQEIVDKAPQLPE-DIKWHFVGHLQSNKAKTLLGGVPNLDMVEGVGNEKIANHLDKAVSNLGRKPLKVLVQVNTSGEESKSGIDPSSCLGIVEHVRLRCPNLEFSGLMTIG--MPDYTSTPENFRTLLNCRAEVCKALGMAEDQCELSMGMSGDFEQAIEMGSTSVRIGSTIF 817
            +++VAVSK      I+  Y+   R+FGEN VQ++  K   L    ++WH +G LQ NK   LL   P L  +  + + K+A  ++K    LG   L  L+QVN++ EESKSG+ P   L     +   C  L+  GLM IG    D T   ++F T         K     ++   LSMGMS DFE AI  G+  +RIGS +F
Sbjct:   28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKIKMHSLEHLPLEWHMIGSLQENKINALLSLKPAL--LHSLDSLKLALKIEKRCEILGVN-LNALLQVNSAYEESKSGVVPEEALETYSQISETCKRLKLKGLMCIGAHTDDETKIEKSFTT-------TKKLFDQIKNASVLSMGMSDDFELAIACGANLLRIGSFLF 220          
The following BLAST results are available for this feature:
BLAST of CK935792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
Y274_AQUAE1.402e-3539.24UPF0001 protein aq_274 OS=Aquifex aeolicus GN=aq_2... [more]
Y090_HAEIN2.392e-3539.15UPF0001 protein HI0090 OS=Haemophilus influenzae G... [more]
YBD6_YEAST6.514e-3342.45UPF0001 protein YBL036C OS=Saccharomyces cerevisia... [more]
Y394_PSEAE1.111e-3239.65UPF0001 protein PA0394 OS=Pseudomonas aeruginosa G... [more]
YGGS_ECOLI1.895e-3240.93UPF0001 protein yggS OS=Escherichia coli (strain K... [more]
YGGS_ECOL61.895e-3240.93UPF0001 protein yggS OS=Escherichia coli O6 GN=ygg... [more]
YGGS_ECO571.895e-3240.93UPF0001 protein yggS OS=Escherichia coli O157:H7 G... [more]
YLME_BACSU1.455e-2433.77UPF0001 protein ylmE OS=Bacillus subtilis GN=ylmE ... [more]
Y395_HELPY1.608e-2334.80UPF0001 protein HP_0395 OS=Helicobacter pylori GN=... [more]
Y395_HELPJ3.583e-2336.45UPF0001 protein jhp_0986 OS=Helicobacter pylori J9... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004390_F02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935792 ID=CK935792; Name=CK935792; organism=Citrus sinensis; type=EST; length=867bp
GGGGATGATGATAAATTGAATAAAAATTGTTCTTATCCACGAAAATCGAA
AACAAGAAGAAAAAGGAAAAGAACAAGTGAAAAGGCTCAAAACACGTACA
CAAAAAGAAAGCAGAATGGCAGCTCCAACAGTCGAGGGAGCAGCTGTGAC
AGCGCTTCGCTCGGTGCTGCACCGGGTCCGACAGGCGGCGGAGCGGTCGG
GTCGGACTCAGGAACAGATACGGGTCGTGGCTGTATCGAAGACAAAACCG
GTTTCCCTGATTCGGCAAGTGTATGATGCTGGTCACCGTAGCTTTGGTGA
AAATTACGTACAAGAAATCGTTGATAAAGCTCCTCAGCTGCCAGAGGACA
TAAAGTGGCATTTTGTAGGGCATTTGCAGAGCAACAAAGCTAAAACTCTT
CTGGGTGGAGTGCCAAATCTGGACATGGTTGAGGGTGTTGGTAATGAGAA
GATTGCAAATCATCTTGACAAAGCTGTTTCAAACCTCGGAAGAAAGCCTT
TGAAGGTTTTGGTCCAAGTGAATACCAGTGGAGAAGAATCAAAATCAGGA
ATTGATCCTTCAAGTTGTCTAGGAATTGTGGAACATGTTAGACTGCGATG
CCCAAATTTGGAGTTTTCGGGCTTAATGACAATAGGGATGCCAGATTATA
CTTCAACTCCAGAGAACTTCAGGACTTTGTTGAATTGTAGAGCTGAGGTT
TGCAAGGCACTTGGAATGGCAGAGGATCAGTGTGAGCTATCGATGGGCAT
GTCTGGTGACTTTGAGCAAGCAATTGAAATGGGTAGTACCAGTGTGAGAA
TCGGATCAACGATATTTGGACCTAGGGAATATGCAAAGAAGCAGCAAAAT
TAATATCAGCTGTGCTG
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