CK935802
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935802 vs. ExPASy Swiss-Prot
Match: ARP3_CAEBR (Actin-related protein 3 OS=Caenorhabditis briggsae GN=arx-1 PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 5.548e-45 Identity = 97/249 (38.96%), Postives = 139/249 (55.82%), Query Frame = 1 Query: 130 VCDNGTGMVKAGFAGDDAPRAVFPSIVG-------------RPRHTGVMVGMGQKDAYVGDEAQSKRGI-LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSA 810 V DNGTG K G+AG+ P+ + PS + R + G+ D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGV+H +P+ +GY + I + +AGRD+T + +L ER ++ E+ + +KEK Y+ D +E T S+ Sbjct: 10 VIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNAQALRWNNRVGGAGIDDLDFFIGDEALSPAASNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWQSREASDRSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQNLLREREHTIPAEQSYEVAKTIKEKFCYVCPDVMKEFVKYDTDSS 258
BLAST of CK935802 vs. ExPASy Swiss-Prot
Match: ARP3_CAEEL (Actin-related protein 3 OS=Caenorhabditis elegans GN=arx-1 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 9.464e-45 Identity = 96/248 (38.71%), Postives = 137/248 (55.24%), Query Frame = 1 Query: 130 VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG------------VMVGMGQKDAYVGDEAQSKRGI-LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSA 810 V DNGTG K G+AG+ P+ + PS + V G+ D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+ +GY + I + +AGRD+T + +L +R ++ E+ + +KEK Y+ D +E T +A Sbjct: 10 VIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKEFVKYDTDAA 257
BLAST of CK935802 vs. ExPASy Swiss-Prot
Match: ARP3_DICDI (Actin-related protein 3 OS=Dictyostelium discoideum GN=arpC PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.108e-44 Identity = 92/241 (38.17%), Postives = 135/241 (56.02%), Query Frame = 1 Query: 100 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK------DAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT-------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQE 783 M + +V DNGTG K G+AG++ P + P+ + G QK D ++GDEA + + P++HG + NW ME+ W H + LR PE+H LLTE PLN NRE +IMFETFN P +Y+A+QAVL+L AS + TG V+DSGDGV+H +PI EGY + +I + +AGRD++ + +I+ ER + EI + +KE+ +Y+ D +E Sbjct: 1 MNPASGLPAVVIDNGTGYTKMGYAGNNDPSFIIPTTIATQSSKGKQTAASQKKGVEDLDFFIGDEAIANSKTYDMTNPVKHGQIENWTHMEQYWEHCVFKYLRCEPEDHYFLLTEPPLNAPENREFTAEIMFETFNVPGLYIAVQAVLALAASWTSKNAEKTLTGTVIDSGDGVTHVIPISEGYVIGSSIKHIPIAGRDISSYVQQIMREREPNIPPAESLEIAKRVKEQYSYVCPDIVKE 241
BLAST of CK935802 vs. ExPASy Swiss-Prot
Match: ARP3_ACACA (Actin-related protein 3 OS=Acanthamoeba castellanii GN=ARP3 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.134e-44 Identity = 93/247 (37.65%), Postives = 135/247 (54.66%), Query Frame = 1 Query: 127 LVCDNGTGMVKAGFAGDDAPRAVFPSIVG----------RPRHTGVMVGMGQK----DAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKT 801 +V DNGTG K G+AG+ P+ + P+ + R R G+ D ++GDEA + + P+ HG V NW ME+ W H + LR PE+H LLTE PLN NRE +IMFETFN P +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY + +I + LAGRD+T+ ++++L ER E+ + +KE +Y+ D +E + T Sbjct: 9 VVIDNGTGYTKMGYAGNTEPQYIIPTAIATKGIAEDPRCRARRWWCPWAAGKNIADLDFFIGDEAYENSKVYQITMPVRHGQVENWTHMEQFWEHCIFKYLRCEPEDHHFLLTEPPLNAPENREYTAEIMFETFNVPGLYIAVQAVLALAASWTSKQVTEKTLTGTVIDSGDGVTHVIPVAEGYVIGSSIKHIPLAGRDITNFVLQLLRERNEKIPPAETLEVAKRIKETFSYVCPDIVKEFKKYDT 255
BLAST of CK935802 vs. ExPASy Swiss-Prot
Match: ACT_CHERU (Actin (Fragment) OS=Chenopodium rubrum PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.193e-43 Identity = 84/85 (98.82%), Postives = 84/85 (98.82%), Query Frame = 1 Query: 355 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 609 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG Sbjct: 1 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 85
BLAST of CK935802 vs. ExPASy Swiss-Prot
Match: ARP3B_MOUSE (Actin-related protein 3B OS=Mus musculus GN=Actr3b PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.782e-43 Identity = 95/238 (39.92%), Postives = 133/238 (55.88%), Query Frame = 1 Query: 118 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG--------RPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQE 783 + P V D GTG K G+AG+ P+ + PS + V+ G+ D ++GDEA K T K+PI HGIV +WD ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+L AS + TGIV+DSGDGV+H +P+ EGY + I + +AGRD+T + ++L ER E + +KEK YI D +E Sbjct: 5 LPPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAIDKPTYAT-KWPIRHGIVEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVRE 241
BLAST of CK935802 vs. ExPASy Swiss-Prot
Match: ARP3B_HUMAN (Actin-related protein 3B OS=Homo sapiens GN=ACTR3B PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.858e-43 Identity = 94/238 (39.50%), Postives = 133/238 (55.88%), Query Frame = 1 Query: 118 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG--------RPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQE 783 + P V D GTG K G+AG+ P+ + PS + V+ G+ D ++GDEA K T K+PI HGI+ +WD ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P +Y+A+QAVL+L AS + TGIV+DSGDGV+H +P+ EGY + I + +AGRD+T + ++L ER E + +KEK YI D +E Sbjct: 5 LPPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAIDKPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKE 241
BLAST of CK935802 vs. ExPASy Swiss-Prot
Match: ARP3_DROME (Actin-related protein 3 OS=Drosophila melanogaster GN=Arp66B PE=1 SV=3) HSP 1 Score: 172.94 bits (437), Expect = 1.973e-42 Identity = 95/234 (40.60%), Postives = 130/234 (55.56%), Query Frame = 1 Query: 130 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQE 783 V D GTG K GFAG+ P+ + PS VG + G+ D ++GDEA G ++KYP+ HG+V +WD ME+ + LR PE+H LLTE PLN NRE +IMFETFN P +Y+A+QAVL+L AS + TGIV+DSGDGV+H +P+ EGY + I + +AGR++T + +L ER E + +KEK YI D +E Sbjct: 9 VIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDEAFDATGY-SIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKE 241
BLAST of CK935802 vs. ExPASy Swiss-Prot
Match: ARP3_SCHPO (Actin-related protein 3 OS=Schizosaccharomyces pombe GN=act2 PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.577e-42 Identity = 101/254 (39.76%), Postives = 140/254 (55.12%), Query Frame = 1 Query: 124 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG---------MGQK--------------DAYVGDEAQSKRGI-LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGY--SFTTTAEREIVRDMKEKLAYIALDYEQE 783 P++ DNGTG K G+AG+DAP VFP+++ R G G M K D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H LLTE PLNP NRE +IMFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY + +I + LAGRD+T + +L +R S TAER +KE+ Y+ D +E Sbjct: 7 PIIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER-----IKEECCYVCPDIVKE 254
BLAST of CK935802 vs. ExPASy Swiss-Prot
Match: ARP3_RAT (Actin-related protein 3 OS=Rattus norvegicus GN=Actr3 PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.577e-42 Identity = 95/243 (39.09%), Postives = 133/243 (54.73%), Query Frame = 1 Query: 130 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSA 810 V D GTG K G+AG+ P+ + PS VG VM G+ D ++GDEA K T K+PI HGIV +WD ME+ + LR PE+H LLTE PLN NRE +IMFE+FN P +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY + I + +AGRD+T + ++L +R E + +KE+ +Y+ D +E T + Sbjct: 9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGS 250 The following BLAST results are available for this feature:
BLAST of CK935802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 485
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935802 ID=CK935802; Name=CK935802; organism=Citrus sinensis; type=EST; length=852bpback to top |