CK935802
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935802 vs. ExPASy Swiss-Prot
Match: ARP10_BOVIN (Actin-related protein 10 OS=Bos taurus GN=ACTR10 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.741e-12 Identity = 59/248 (23.79%), Postives = 111/248 (44.76%), Query Frame = 1 Query: 127 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAERE------------IVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP 834 +V D G K GFAG+ PR + PS++ + A + I ++Y I + ++ +++ H ++ L V P + V++ E+ L P RE +T+++F+ F P++ +A +++L G + +VLD G S +PIYEG + + L L G+ L L L E+ T A+ + I+ D+K + +++ D ++ L ++ + E P Sbjct: 16 VVIDLGEAFTKCGFAGETGPRCIIPSVIKK--------------------AGMPKPIRVVQYNINTEELYSY--LKEFIHILYFRHLLVNPRDRRVVVIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPVLNCWGALPLGGKALHKELETQLLEQCTVDTGAAKEQSLPSVMGSIPEGILEDIKVRTCFVS-DLKRGLNIQAAKFNIDGNTERP 240
BLAST of CK935802 vs. ExPASy Swiss-Prot
Match: ARP8_ORYSJ (Actin-related protein 8 OS=Oryza sativa subsp. japonica GN=ARP8 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.056e-11 Identity = 46/149 (30.87%), Postives = 77/149 (51.68%), Query Frame = 1 Query: 370 TFYNELRVAPEEHPVLLT----------EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQE 783 T Y ++V P P+++ A + K R+ + ++F+ N PA+ QAVL+LYA+ RT+GIV++ G + VPI++G + + + LT L +++ +R +F + VR +KEKL Y+A DYE E Sbjct: 188 TIYTRMQVKPSTQPIIVVLPLCHSDDTESARASRKQYRDTLYSVLFD-MNVPAVCSVDQAVLALYAAKRTSGIVVNIGFNATSIVPIFQGRVMHEIGVETVGQGALKLTGFLKELMQQRNITFESL---YTVRTIKEKLCYVAADYEAE 332
BLAST of CK935802 vs. ExPASy Swiss-Prot
Match: ARP8_ORYSI (Actin-related protein 8 OS=Oryza sativa subsp. indica GN=ARP8 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.056e-11 Identity = 46/149 (30.87%), Postives = 77/149 (51.68%), Query Frame = 1 Query: 370 TFYNELRVAPEEHPVLLT----------EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQE 783 T Y ++V P P+++ A + K R+ + ++F+ N PA+ QAVL+LYA+ RT+GIV++ G + VPI++G + + + LT L +++ +R +F + VR +KEKL Y+A DYE E Sbjct: 188 TIYTRMQVKPSTQPIIVVLPLCHSDDTESARASRKQYRDTLYSVLFD-MNVPAVCSVDQAVLALYAAKRTSGIVVNIGFNATSIVPIFQGRVMHEIGVETVGQGALKLTGFLKELMQQRNITFESL---YTVRTIKEKLCYVAADYEAE 332
BLAST of CK935802 vs. ExPASy Swiss-Prot
Match: ARP6_DEBHA (Actin-like protein ARP6 OS=Debaryomyces hansenii GN=ARP6 PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.801e-11 Identity = 67/258 (25.97%), Postives = 106/258 (41.09%), Query Frame = 1 Query: 121 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDE---AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFY----NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN-------TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVIT 852 Q V DNG+ +KAGF+ DAP +H + YVG+E + + K P +HG + +W+ + +W +TF N+ A H + LTE P QI+FE + PA V + S + +V+DSG + VPI + +L + G L L +I++ R Y E ++ +KEK ++A D+E+ L K + LPD + T Sbjct: 4 QYFVIDNGSYNIKAGFSNQDAP----------IKHQNALSKARDGLIYVGNEYLVQTNNYSGMIFKRPYDHGHLISWETEKAVWDYTFNKASPNQELDASITH-LTLTETPFQLPQLSMNTDQIVFEEYGFNEYYRCAPASLVPWSNLGSSESKNNDFTLVVDSGYSGTWIVPIIYQNVYWKGVKKLPIGGAALNGLLREIISFRHYDIAD--EPVLINTIKEKTCFMATDFEKSLANRKKYRC---EFILPDFKTTT 245
BLAST of CK935802 vs. ExPASy Swiss-Prot
Match: ARP8_ARATH (Actin-related protein 8 OS=Arabidopsis thaliana GN=ARP8 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.073e-11 Identity = 54/164 (32.93%), Postives = 85/164 (51.83%), Query Frame = 1 Query: 370 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYE 828 T + ++V P P++++ PL + KA+R ++ +F N PA+ QAVL+LYA+ RT+GIV++ G V +PI G + + + LT L + + E SF + VR +KEKL Y+ALDY+ EL + T ++VE S E Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNISFQSL---YTVRTLKEKLCYVALDYKAEL-SKDTQASVEVSGE 340 The following BLAST results are available for this feature:
BLAST of CK935802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 485
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935802 ID=CK935802; Name=CK935802; organism=Citrus sinensis; type=EST; length=852bpback to top |