CK935896
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_METPP (RNA pyrophosphohydrolase OS=Methylibium petroleiphilum (strain PM1) GN=rppH PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.981e-23 Identity = 59/151 (39.07%), Postives = 83/151 (54.97%), Query Frame = 3 Query: 195 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGV--SSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFT 641 EG+R NVGI L+N ++F R+ SWQ PQGGI E P+ A REL EE G+ +LA WL Y+ P ++ + G ++GQ Q WFLL+ TG++ ++NL + PEF W+W LE +DFK+ VY+ T Sbjct: 5 EGFRPNVGIVLLNQRNQVFWGKRIRT-HSWQFPQGGIKYGETPEQAMYRELHEEVGLQPEHVRILARTRDWLRYEVPDHY---IRREARGHYRGQKQIWFLLQLTGRDNDMNLRA--CDHPEFDAWRWNEYWVPLEVVIDFKRDVYQMALT 149
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_LEPCP (RNA pyrophosphohydrolase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=rppH PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.981e-23 Identity = 58/151 (38.41%), Postives = 83/151 (54.97%), Query Frame = 3 Query: 195 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGV--SSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFT 641 EG+R NVGI L+N ++F R+ SWQ PQGGI E P+ A REL EE G+ ++A WL Y+ P ++ G +KGQ Q WFLL+ TG++ ++NL ++ PEF W+W LE ++FK+ VY+ T Sbjct: 5 EGFRPNVGIILLNQRSEVFWGKRIRT-HSWQFPQGGIKHGESPEQAMFRELHEEVGLFPDHVRIIARTRDWLRYEVPDHF---IRRDARGHYKGQKQIWFLLQLTGRDSDMNLRA--TDHPEFDAWRWHDYWVPLEVVIEFKRNVYQMALT 149
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_XANOR (RNA pyrophosphohydrolase OS=Xanthomonas oryzae pv. oryzae GN=rppH PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.304e-22 Identity = 62/159 (38.99%), Postives = 84/159 (52.83%), Query Frame = 3 Query: 192 PEGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGV--SSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 662 P+G+R NVGI L+ ++F A R+ D WQ PQGG++ +E P A REL+EETG+ E+L P WL Y P + + Q GQ Q WFLL+FTG E + L D ++ PEF W+W+ +E V FK+ VY P Q Sbjct: 4 PDGFRPNVGIVLMRQDGQVFWARRVR-RDGWQFPQGGMNTDETPVEAMYRELREETGLLPEHVELLGATPGWLRYRLPSRAVRRNERQ---VCIGQKQVWFLLRFTGDESHLKL--DHTDTPEFDHWRWVDFWYPVEHVVMFKRGVYARALRHLAPIAQ 156
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_XANOM (RNA pyrophosphohydrolase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=rppH PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.304e-22 Identity = 62/159 (38.99%), Postives = 84/159 (52.83%), Query Frame = 3 Query: 192 PEGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGV--SSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 662 P+G+R NVGI L+ ++F A R+ D WQ PQGG++ +E P A REL+EETG+ E+L P WL Y P + + Q GQ Q WFLL+FTG E + L D ++ PEF W+W+ +E V FK+ VY P Q Sbjct: 4 PDGFRPNVGIVLMRQDGQVFWARRVR-RDGWQFPQGGMNTDETPVEAMYRELREETGLLPEHVELLGATPGWLRYRLPSRAVRRNERQ---VCIGQKQVWFLLRFTGDESHLKL--DHTDTPEFDHWRWVDFWYPVEHVVMFKRGVYARALRHLAPIAQ 156
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_STRM5 (RNA pyrophosphohydrolase OS=Stenotrophomonas maltophilia (strain R551-3) GN=rppH PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.304e-22 Identity = 63/159 (39.62%), Postives = 83/159 (52.20%), Query Frame = 3 Query: 192 PEGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGV--SSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 662 P+GYR NVGI L+ ++F A R+ D WQ PQGG++ +E P A REL+EETG+ EVL P WL Y P + + Q GQ Q WFLL+ TG E + L D ++ PEF W+W+ +E V FK+ VY P Q Sbjct: 4 PDGYRPNVGIVLMRQDGQVFWARRVR-RDGWQFPQGGMNTDETPVEAMYRELQEETGLLPEHVEVLGATPGWLRYKLPARAIRRNERQ---VCIGQKQVWFLLRLTGDESHVCL--DHTDSPEFDHWRWVDFWYPVEHVVMFKRGVYARALRHLAPLAQ 156
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_PSEA6 (RNA pyrophosphohydrolase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=rppH PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.304e-22 Identity = 62/155 (40.00%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 195 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGV--SSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTP 653 EG+R NVGI + NS ++F A R SWQ PQGGIDE E + REL EE G+ ++LA WL Y P + ++ GQ QKWFLL+ T KE++++LL +S PEF +W+W+S + V FK+ VY+ F P Sbjct: 5 EGFRANVGIVICNSLGQVFWARRYG-QHSWQFPQGGIDEGETAEQTMYRELYEEVGLKPEHVKILAVTKNWLRYKLP---KRLIRQGSAPVCIGQKQKWFLLQLTCKEQDVDLL--QSGHPEFDDWRWVSFWYPVRNVVSFKREVYRRAMKEFAP 153
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_XANC5 (RNA pyrophosphohydrolase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=rppH PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.703e-22 Identity = 62/159 (38.99%), Postives = 84/159 (52.83%), Query Frame = 3 Query: 192 PEGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGV--SSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 662 P+G+R NVGI L+ ++F A R+ D WQ PQGG++ +E P A REL+EETG+ E+L P WL Y P + + Q GQ Q WFLL+FTG E + L D ++ PEF W+W+ +E V FK+ VY P Q Sbjct: 4 PDGFRPNVGIVLMRQDGQVFWARRVR-RDGWQFPQGGMNTDETPVEAMYRELREETGLLPEHVELLGATPGWLRYRLPSRAVRRNERQ---VCIGQKQVWFLLQFTGDESHLKL--DHTDTPEFDHWRWVDFWYPVEHVVMFKRGVYARALRHLAPLAQ 156
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_XANAC (RNA pyrophosphohydrolase OS=Xanthomonas axonopodis pv. citri GN=rppH PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.703e-22 Identity = 62/159 (38.99%), Postives = 84/159 (52.83%), Query Frame = 3 Query: 192 PEGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGV--SSAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 662 P+G+R NVGI L+ ++F A R+ D WQ PQGG++ +E P A REL+EETG+ E+L P WL Y P + + Q GQ Q WFLL+FTG E + L D ++ PEF W+W+ +E V FK+ VY P Q Sbjct: 4 PDGFRPNVGIVLMRQDGQVFWARRVR-RDGWQFPQGGMNTDETPVEAMYRELREETGLLPEHVELLGATPGWLRYRLPSRAVRRNERQ---VCIGQKQVWFLLQFTGDESHLKL--DHTDTPEFDHWRWVDFWYPVEHVVMFKRGVYARALRHLAPLAQ 156
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_HAES2 (RNA pyrophosphohydrolase OS=Haemophilus somnus (strain 2336) GN=rppH PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.224e-22 Identity = 61/153 (39.87%), Postives = 87/153 (56.86%), Query Frame = 3 Query: 195 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGVS--SAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVF 647 +GYR NVGI + N+ +++ A R +SWQ PQGGI++NE + A REL EE G++ E+L +WL Y P + L+H GQ Q+WFLL+ E+ IN+ KS PEF W+W+S + + V FKK VY++V F Sbjct: 5 DGYRPNVGIVICNAERQVLWAKRYG-QNSWQFPQGGINDNETAEQAMYRELYEEAGLTPKDVEILYVSKHWLRYKLP---KRLLRHDNRPICIGQKQRWFLLQLVSDEKRINMQHTKS--PEFDGWRWVSFWYPVRQVVTFKKDVYRKVMKEF 151
BLAST of CK935896 vs. ExPASy Swiss-Prot
Match: RPPH_HAES1 (RNA pyrophosphohydrolase OS=Haemophilus somnus (strain 129Pt) GN=rppH PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.224e-22 Identity = 61/153 (39.87%), Postives = 87/153 (56.86%), Query Frame = 3 Query: 195 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQGGIDENEDPKVAALRELKEETGVS--SAEVLAEVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVFTVF 647 +GYR NVGI + N+ +++ A R +SWQ PQGGI++NE + A REL EE G++ E+L +WL Y P + L+H GQ Q+WFLL+ E+ IN+ KS PEF W+W+S + + V FKK VY++V F Sbjct: 5 DGYRPNVGIVICNAERQVLWAKRYG-QNSWQFPQGGINDNETAEQAMYRELYEEAGLTPKDVEILYVSKHWLRYKLP---KRLLRHDNRPICIGQKQRWFLLQLVSDEKRINMQHTKS--PEFDGWRWVSFWYPVRQVVTFKKDVYRKVMKEF 151 The following BLAST results are available for this feature:
BLAST of CK935896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 325
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935896 ID=CK935896; Name=CK935896; organism=Citrus sinensis; type=EST; length=841bpback to top |