CK935900

Overview
NameCK935900
Unique NameCK935900
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: FABG4_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 4 (Fragment) OS=Brassica napus GN=bkr4 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.422e-26
Identity = 84/250 (33.60%), Postives = 130/250 (52.00%), Query Frame = 2
Query:   68 VVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGAL-KPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLA-TDASEWVNGQVIRVNGG 811
            VV+VTG+SRGIG+ IA+ L + G K+++NY  ++ +A+ V+ +I        Y  +AIT   DVS  A V ++  +A   + + + V+VN+AG        +       +D +  +N  G FL C +AA                S+VG +   G A Y A+KA V   +K  A+E     I  N V PG IA++M      E+M KK++   P  R GQ +DVA +V FLA + A+ ++ GQ   ++GG
Sbjct:   16 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEE------YGGQAITFGGDVSKEADVDAMMKTAVDKWGT-IDVVVNNAG-----DTLLIRMKKSQWDEVMDLNLTGVFL-CSQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-LGEDMEKKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQTFTIDGG 251          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: FABG5_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic (Fragment) OS=Brassica napus GN=bkr1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.469e-26
Identity = 84/251 (33.47%), Postives = 130/251 (51.79%), Query Frame = 2
Query:   68 VVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGAL-KPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLA-TDASEWVNGQVIRVNGGY 814
            VV+VTG+SRGIG+ IA+ L + G K+++NY  ++ +A+ V+ +I        Y   AIT   DVS  A V S+  +A   + + + V+VN+AG+   +   +       +D +  +N  G FL C +AA                S+VG +   G A Y A+KA V   +K  A+E     I  N V PG IA++M      E+M KK++   P  R GQ + VA +V FLA + AS ++ G    ++GG+
Sbjct:   76 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEE------YGGEAITFGGDVSKEADVDSMMKTAVDKWGT-IDVVVNNAGI--TRDTLLIRMKKSQWDEVIDLNLTGVFL-CTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK-LGEDMEKKILGTIPLGRYGQPEYVAGLVEFLALSPASSYITGHTFSIHGGF 315          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: THR1_GLOLA (Trihydroxynaphthalene reductase OS=Glomerella lagenarium GN=THR1 PE=3 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 5.837e-26
Identity = 79/250 (31.60%), Postives = 134/250 (53.60%), Query Frame = 2
Query:   65 RVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGALK--PGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSE------EMVKKVIEE-----CPHNRLGQSKDVAPVVGFLATDASE 775
            +V +VTG+ RGIGRE+A+ L + GAK+++NY +++  A+ V   I  S S A       ++KA+VSD  Q+  +F  A+Q +   + ++ +++G++   +  + + + ++FDR+F++N RG F   +EA                 S+ G  K  P +A Y+ SK  +ET  + +A +     IT N VAPG I T+M+ D   E      E+  + ++E      P +R+G   D+A VV FLA+   E
Sbjct:   30 KVALVTGAGRGIGREMAMELGRRGAKVIVNYANSAETAEEVVQAIKKSGSDAA------SIKANVSDVDQIVKMFGEAKQIW-GRLDIVCSNSGVV--SFGHVKDVTPEEFDRVFAINTRGQFFVAREAYKHLEVGGRLILMG---SITGQAKGVPKHAVYSGSKGTIETFVRCMAIDFGDKKITVNAVAPGGIKTDMYRDVCREYIPNGGELDDEGVDEFAAGWSPMHRVGLPIDIARVVCFLASQDGE 267          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: FABG_ARATH (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g24360 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 5.837e-26
Identity = 80/250 (32.00%), Postives = 134/250 (53.60%), Query Frame = 2
Query:   68 VVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGAL-KPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLA-TDASEWVNGQVIRVNGG 811
            VV++TG+SRGIG+ IA+ L + G K+++NY  ++ +A+ VA +I        Y  +AIT   DVS    V ++  +A   + + + V+VN+AG+   +   +       +D + ++N  G FLC + A               S S+VG +   G A Y A+K  V + +K  A+E     I  N V PG IA++M  +   E+M KK++   P  R G++++VA +V FLA + A+ ++ GQ   ++GG
Sbjct:   78 VVVITGASRGIGKAIALALGKAGCKVLVNYARSAKEAEEVAKQIEE------YGGQAITFGGDVSKATDVDAMMKTALDKWGT-IDVVVNNAGI--TRDTLLIRMKQSQWDEVIALNLTGVFLCTQAAVKIMMKKKRGRIINIS-SVVGLIGNIGQANYAAAKGGVISFSKTAAREGASRNINVNVVCPGFIASDMTAE-LGEDMEKKILGTIPLGRYGKAEEVAGLVEFLALSPAASYITGQAFTIDGG 316          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: DHB8_HUMAN (Estradiol 17-beta-dehydrogenase 8 OS=Homo sapiens GN=HSD17B8 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.300e-25
Identity = 80/254 (31.50%), Postives = 125/254 (49.21%), Query Frame = 2
Query:   59 KDRVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRA--ITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGAL-KPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            +  + +VTG+  GIGR +++ LA  GA +       +A  + V   +         PPR      +ADVS+    + L +  +  F  P  V+V+ AG+   ++  + + S DD+D++ +VN +G FL  + AA               +S+VG +   G   Y ASKA V  + +  A+EL   GI  N V PG IAT M      +++V K+ E  P   LG  +DVA VV FLA++ S ++ G  + V GG
Sbjct:   10 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETV--RLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEF--LLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMT-QKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGG 258          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: DHG2_BACSU (Glucose 1-dehydrogenase 2 OS=Bacillus subtilis GN=ycdF PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.783e-25
Identity = 77/250 (30.80%), Postives = 127/250 (50.80%), Query Frame = 2
Query:   65 RVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGAL-KPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            +  IVTGSS+GIG+ IA    +    +V+NY S+ + AD     I  +        +A++V+ADVS    +++L D+A + F + + V+VN++G    +       SL+D+ R+  VN  G FL  K A N              +S+   + +P    Y+ SK  ++ M + LA      GI  N +APG IATE   D K EE  +K +++ P    G+ ++VA    +L ++ + +V G  + V+GG
Sbjct:    8 KTAIVTGSSKGIGKAIAERFGKEKMNVVVNYHSDPSGADETLEIIKQNGG------KAVSVEADVSKEEGIQALLDTALEHFGT-LDVMVNNSGFNGVEAMP-HEMSLEDWQRVIDVNVTGTFLGAKAALNHMMKNNIKGNVLNISSVHQQIPRPVNVQYSTSKGGIKMMTETLALNYADKGIRVNAIAPGTIATESNVDTKKEESRQKQLKKIPMKAFGKPEEVAAAAAWLVSEEASYVTGATLFVDGG 249          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: DHG2_BACME (Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.783e-25
Identity = 81/256 (31.64%), Postives = 134/256 (52.34%), Query Frame = 2
Query:   59 KDRVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGALK-PGYAAYTASKAAVETMAKILAKELKGTGITANCVAPG----PIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            KD+VV+VTG S+G+GR +A+   Q  +K+V+NY SN  +A  V  EI  +        +AI V+ DV+    V +L ++A + F S + V++N+AG+ +P  P+    SL++++++   N  GAFL  +EA                +S+   +  P +  Y ASK  ++ M + LA E    GI  N + PG    PI  E F D +    V+ +I   P   +G+ +++A V  FLA+  + +V G  +  +GG
Sbjct:    6 KDKVVVVTGGSKGLGRAMAVRFGQEQSKVVVNYRSNEEEALEVKKEIEEAGG------QAIIVRGDVTKEEDVVNLVETAVKEFGS-LDVMINNAGVENP-VPS-HELSLENWNQVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAIDTPINAEKFADPEQRADVESMI---PMGYIGKPEEIASVAAFLASSQASYVTGITLFADGG 249          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: DHB8_CANFA (Estradiol 17-beta-dehydrogenase 8 OS=Canis familiaris GN=HSD17B8 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.783e-25
Identity = 82/253 (32.41%), Postives = 125/253 (49.41%), Query Frame = 2
Query:   59 KDRVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITV-KADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGAL-KPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            +  + +VTG+  GIGR +++ LA+ GA +       +A  + V   +    S    P  A T  +ADVS+   V+ L +  +  F  P  V+V+ AGL   ++  +   S DD+DR+ +VN +G FL  + AA               +S+VG +   G   Y ASKA V  + +  A+EL   GI  N V PG I T M      ++++ KVI   P   LG  +DVA  V FLA++ S ++ G  + V GG
Sbjct:    8 RSALALVTGAGSGIGRAVSVRLAKEGATVAACDLDRAAACETVWL-LGGQGSEKVAPGGAHTAFQADVSEAGAVRRLLEQVQACFSRPPSVVVSCAGLTRDEF--LLRMSEDDWDRVIAVNLKGIFLVTQAAAQALVSSGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFITTPMT-QKVPQKVLDKVIGMIPMGHLGDPEDVADAVTFLASEDSGYITGASVEVTGG 256          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: DHB8_RAT (Estradiol 17-beta-dehydrogenase 8 OS=Rattus norvegicus GN=Hsd17b8 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.428e-25
Identity = 82/253 (32.41%), Postives = 124/253 (49.01%), Query Frame = 2
Query:   59 KDRVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGAL-KPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVK-KVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            +  + +VTG+  GIGR I++ LA  GA +       +A  D V    N  +       +    +ADVS+    K L +  +  F  P  V+V+ AG+   ++  + + S +D+DR+ +VN +G FL  + AA               +S+VG +   G   Y +SKA V  + +  A+EL   GI  N V PG IAT M    K  E VK KV    P   +G  +DVA VV FLA++ S ++ G  + V+GG
Sbjct:    8 RSALALVTGAGSGIGRAISVRLAAEGAAVAACDLDGAAAQDTVRLLGNPGSEDREPRGKHAAFQADVSEGPAAKRLLEQVQACFFRPPSVVVSCAGITRDEF--LLHMSEEDWDRVIAVNLKGTFLVTQAAAQALVSSGGRGSIINISSIVGKVGNIGQTNYASSKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPM--TQKMPEKVKDKVTAMIPLGHMGDPEDVADVVAFLASEDSGYITGASVEVSGG 256          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: GRDH_ORYSJ (Glucose and ribitol dehydrogenase homolog OS=Oryza sativa subsp. japonica GN=Os05g0140800 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.878e-24
Identity = 81/262 (30.92%), Postives = 122/262 (46.56%), Query Frame = 2
Query:   59 KDRVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADV---VAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAA----NXXXXXXXXXXXXXSTSLVGALKPGYAA--YTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGGYV 817
            KD+V IVTG   GIGR + +  A  GA +   Y     + D    + A  +  A      P AI   AD+      + + D    A+   + +LVN+A     + P+I + + DD +R+F  N    F   K A     +             +TS + A K       YTA+K A+    + LA +L   GI  N VAPGPI T +     +EE V++   + P  R GQ  +VAP   FLA+D + +++GQ++ VNGG +
Sbjct:   39 KDKVAIVTGGDSGIGRAVCLCFALEGATVAFTYVKGQEEKDAEETLRALRDIRARTGAKDPMAIP--ADLGYDDNCRKVVDEVAGAYGGAIDILVNNAAEQYER-PSITDITEDDLERVFRTNIFSYFFMSKHAVKRMRDRRGGAGAGGCSIINTSSINAYKGNKTLLDYTATKGAIVAFTRALALQLAEEGIRVNGVAPGPIWTPLIPASFAEEKVRQFGSQVPMGRAGQPSEVAPSFVFLASDDASYMSGQMLHVNGGVI 297          
The following BLAST results are available for this feature:
BLAST of CK935900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
FABG4_BRANA3.422e-2633.603-oxoacyl-[acyl-carrier-protein] reductase 4 (Frag... [more]
FABG5_BRANA4.469e-2633.473-oxoacyl-[acyl-carrier-protein] reductase 5, chlo... [more]
THR1_GLOLA5.837e-2631.60Trihydroxynaphthalene reductase OS=Glomerella lage... [more]
FABG_ARATH5.837e-2632.003-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
DHB8_HUMAN1.300e-2531.50Estradiol 17-beta-dehydrogenase 8 OS=Homo sapiens ... [more]
DHG2_BACSU3.783e-2530.80Glucose 1-dehydrogenase 2 OS=Bacillus subtilis GN=... [more]
DHG2_BACME3.783e-2531.64Glucose 1-dehydrogenase 2 OS=Bacillus megaterium G... [more]
DHB8_CANFA3.783e-2532.41Estradiol 17-beta-dehydrogenase 8 OS=Canis familia... [more]
DHB8_RAT8.428e-2532.41Estradiol 17-beta-dehydrogenase 8 OS=Rattus norveg... [more]
GRDH_ORYSJ1.878e-2430.92Glucose and ribitol dehydrogenase homolog OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004389_D03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IIIF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935900 ID=CK935900; Name=CK935900; organism=Citrus sinensis; type=EST; length=860bp
GGGGAACCCAATGGCCACCAGCACCAATACCCCATCGCTTTCACTCCCAC
TACCACTCAAAGATCGAGTTGTAATAGTGACCGGCTCATCTCGGGGAATC
GGCCGAGAAATCGCGATTCACCTTGCCCAACTCGGAGCCAAACTCGTCAT
CAACTACACCTCCAACTCGGCTCAAGCCGACGTCGTAGCCGCCGAGATTA
ACTCGTCGGCTTCCCCTGCCACATATCCGCCACGAGCCATTACTGTCAAA
GCCGACGTTTCGGATCCGGCCCAGGTCAAGTCTCTCTTTGACTCCGCTGA
GCAGGCTTTTGACTCGCCGGTTCATGTCCTGGTTAACTCCGCTGGGTTGC
TTGATCCGAAGTACCCCACTATTGCAAACACTTCCTTGGATGACTTTGAT
CGTATTTTCAGTGTCAATGCAAGGGGTGCATTCTTATGTTGCAAAGAGGC
AGCAAATAGGCTAGAACGCGGTGGCGGGGGTAGGATTATTCTGATATCAA
CATCACTGGTTGGCGCATTGAAGCCAGGGTATGCCGCGTACACAGCATCC
AAGGCAGCGGTGGAGACAATGGCGAAGATACTAGCAAAGGAGCTCAAGGG
AACCGGAATAACAGCAAATTGCGTAGCTCCAGGGCCGATTGCAACTGAGA
TGTTCTTTGATGGGAAGAGTGAGGAGATGGTGAAGAAGGTGATTGAAGAG
TGCCCGCATAATCGGCTTGGCCAGAGCAAGGATGTTGCTCCTGTTGTTGG
ATTCTTGGCCACTGATGCTAGTGAGTGGGTTAATGGGCAAGTAATTCGTG
TTAATGGTGGGTATGTCTAGGTTTTAGTAAGTATTCCTCATAGAATATTT
AAAGGAGTTG
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