CK935900

Overview
NameCK935900
Unique NameCK935900
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: FABG_HAEIN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Haemophilus influenzae GN=fabG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.488e-21
Identity = 72/249 (28.92%), Postives = 118/249 (47.39%), Query Frame = 2
Query:   65 RVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGALKPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            ++ +VTGS+RGIGR IA  L+  GA  VI   ++   A+ ++A +                  +V+D   +++L +  +  F   + +LVN+AG+       +     +++  I   N    +   K                  + +     PG   Y A+KA V   +K LAKE+   GIT N VAPG IAT+M  +  ++E    ++   P  RLG++KD+A  V FLA+D + ++ G  + VNGG
Sbjct:    4 KIALVTGSTRGIGRAIAEELSSKGA-FVIGTATSEKGAEAISAYLGDKGKGLVL---------NVTDKESIETLLEQIKNDFGD-IDILVNNAGITRDNL--LMRMKDEEWFDIMQTNLTSVYHLSKAMLRSMMKKRFGRIINIGSVVGSTGNPGQTNYCAAKAGVVGFSKSLAKEVAARGITVNVVAPGFIATDM-TEVLTDEQKAGILSNVPAGRLGEAKDIAKAVAFLASDDAGYITGTTLHVNGG 238          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: FABG_MYCS2 (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium smegmatis GN=fabG PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.943e-21
Identity = 79/250 (31.60%), Postives = 121/250 (48.40%), Query Frame = 2
Query:   65 RVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGALKPGYAA-YTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            R V+VTG +RGIG  IA  LA  G K+ + +  + A  D+                    V+ DV+D A V   F   E+    PV VLV +AG+    +  +   + + F+ + + N  GAF C + A+                S+ G    G  A Y A+KA +  MA+ +++EL   G+TAN VAPG I TEM      E +    ++  P  R+G +++VA  V FLA++ + ++ G VI V+GG
Sbjct:   24 RSVLVTGGNRGIGLAIARRLAADGHKVAVTHRGSGAPDDLFG------------------VQCDVTDSAAVDRAFKEVEE-HQGPVEVLVANAGISKDAF--LMRMTEERFEEVINTNLTGAFRCAQRASRTMQRKRFGRIIFIG-SVSGMWGIGNQANYAAAKAGLIGMARSISRELAKAGVTANVVAPGYIDTEM-TRALDERIQAGALDFIPAKRVGTAEEVAGAVSFLASEDASYIAGAVIPVDGG 250          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.538e-21
Identity = 79/252 (31.35%), Postives = 121/252 (48.02%), Query Frame = 2
Query:   65 RVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGAL-KPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGGYV 817
            +V ++TG++ GIG+   +  AQ GA ++    S      +V     +   P    P  +    +V+D  Q+K + +   Q +   + VLVN+AG+   +   +     +D+D + +VN +G F   +                 S S+VG    PG   Y ASKA V  M K  AKEL G  I  N VAPG I T M  +   E+  +  +   P  R G+ ++VA V+ FLA+D S +V GQVI ++GG V
Sbjct:    6 KVCLITGAASGIGKATTLLFAQEGATVIAGDISKENLDSLVK---EAEGLPGKVDPYVL----NVTDRDQIKEVVEKVVQKYGR-IDVLVNNAGIT--RDALLVRMKEEDWDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVS-SVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVNAVAPGFIETPM-TEKLPEKARETALSRIPLGRFGKPEEVAQVILFLASDESSYVTGQVIGIDGGLV 245          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: FABG_MYCTU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium tuberculosis GN=fabG PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.314e-21
Identity = 80/250 (32.00%), Postives = 122/250 (48.80%), Query Frame = 2
Query:   65 RVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGALKPGYAA-YTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            R V+VTG +RGIG  IA  LA  G K+ + +  + A                  P     V+ DV+D   V   F + E+    PV VLV++AGL    +  +   + + F+++ + N  GAF   + A+                S+ G+   G  A Y ASKA V  MA+ +A+EL    +TAN VAPG I T+M      E + +  ++  P  R+G   +VA VV FLA++ + +++G VI V+GG
Sbjct:   16 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA------------------PKGLFGVECDVTDSDAVDRAFTAVEE-HQGPVEVLVSNAGLSADAF--LMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIG-SVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDM-TRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG 242          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: FABG_MYCBO (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium bovis GN=fabG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.314e-21
Identity = 80/250 (32.00%), Postives = 122/250 (48.80%), Query Frame = 2
Query:   65 RVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGALKPGYAA-YTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            R V+VTG +RGIG  IA  LA  G K+ + +  + A                  P     V+ DV+D   V   F + E+    PV VLV++AGL    +  +   + + F+++ + N  GAF   + A+                S+ G+   G  A Y ASKA V  MA+ +A+EL    +TAN VAPG I T+M      E + +  ++  P  R+G   +VA VV FLA++ + +++G VI V+GG
Sbjct:   16 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA------------------PKGLFGVECDVTDSDAVDRAFTAVEE-HQGPVEVLVSNAGLSADAF--LMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIG-SVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDM-TRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG 242          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.653e-21
Identity = 76/256 (29.69%), Postives = 123/256 (48.05%), Query Frame = 2
Query:   65 RVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTS--LVGALKPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFF-----DGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            +VV++TG+  GIG++ A+  A+ GAK+ IN  S     + V   I S    A +      +  DV+  A+   +     + F   + +LVN+AG++   Y  I  TS +DFD+  +VN +G FL  K A               S+   L+G   P    Y+ SKAA+  + + LA +    GI  N V PG   +E            EE++KK+    P  RLG+ +++A  + F A D + ++ G +I ++GG
Sbjct:    6 KVVLITGAGSGIGKKAAVMFAERGAKVAINDISEEKGKETVEL-IKSMGGEAAF------IFGDVAKDAE--QIVKKTVETFGR-LDILVNNAGIVP--YGNIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQGGGVIVNVSSEAGLIGI--PRRCVYSVSKAALLGLTRSLAVDYVDYGIRVNAVCPGTTQSEGLMARVKASPNPEELLKKMTSRIPMKRLGKEEEIAFAILFAACDEAGFMTGSIINIDGG 247          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: Y4MP_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4mP OS=Rhizobium sp. (strain NGR234) GN=NGR_a02430 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.259e-20
Identity = 85/255 (33.33%), Postives = 122/255 (47.84%), Query Frame = 2
Query:   59 KDRVVIVTG--SSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAF-LCCKEAANXXXXXXXXXXXXXSTSLV-GALKPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            K +  +++G  S RGIGR  A   A  GA++ I    N+ +A   A ++     P       I ++ DV+D A   S  D    AF    ++L+N+AG+  P      + S  D+ RI +VN  G   L      N             S S   G    G   Y+A+KA V  +AK +A+E     I  NCV PG I T++  D  S EM   +++  P +RLG ++DVA +  FLA+D S +V G VI VNGG
Sbjct:    4 KGKTAVISGAASKRGIGRATAELFASHGARVAI-LDINADEAKAAAGDL-----PPVEHGAHIGLRCDVADRASCTSASDEVLSAF-GVANILINNAGITQPV--KTLDISDADWQRIVAVNMTGVLNLSQVFIPNMRQNGGGSIACMSSVSAQRGGGIFGGPHYSAAKAGVLGLAKAMAREFGPDSIRVNCVTPGLIQTDITGDKLSAEMRADIVKGIPLSRLGDARDVANIYLFLASDLSAYVTGAVIDVNGG 249          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: NODG_RHIS3 (Nodulation protein G OS=Rhizobium sp. (strain N33) GN=nodG PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.645e-20
Identity = 82/250 (32.80%), Postives = 123/250 (49.20%), Query Frame = 2
Query:   65 RVVIVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGAL-KPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMFFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGG 811
            R  +VTG+S GIG  IA  L   GA + ++ T    + + +AAE+           R     A++S+  +VK+L   AE   +  V +LVN+AG+   K       S  D+D +  VN    F   +E  +              TS+VG    PG   Y ASKA +   +K LA+E+    IT NCVAPG I + M  D  +++  + ++   P  R+G S +VA  V +LA++ + +V GQ I VNGG
Sbjct:    7 RKALVTGASGGIGEAIARVLHAQGAIVGLHGT-RVEKLETLAAELGD---------RVKLFPANLSNRDEVKALGQKAEADLEG-VDILVNNAGIT--KDGLFVRMSDADWDTVLEVNLTAVFRLTRELTHPMMRRRHGRIINI-TSVVGVTGNPGQTNYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIESAM-TDKLNDKQKEAIMAAIPTRRMGTSVEVASAVAYLASNEAAYVTGQTIHVNGG 241          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: BUDC_KLEPN (Acetoin(diacetyl) reductase OS=Klebsiella pneumoniae GN=budC PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.645e-20
Identity = 80/263 (30.42%), Postives = 131/263 (49.81%), Query Frame = 2
Query:   65 RVVIVTGSSRGIGREIAIHLAQLG-AKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKADVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGAL-KPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEMF--FDGKSEEMVKKVI--------EECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGGYV 817
            +V +VTG+ +GIG+ IA+ L + G A  + +Y  N A A  VA+EIN +        RA+ VK DVSD  QV +  + A +       V+VN+AG+  P  P I + + +  D+++++N +G     + A               + S  G +  P  A Y++SK AV  + +  A++L   GIT N   PG + T M+   D +  E   K +        +     RL + +DVA  V +LA+  S+++ GQ + ++GG V
Sbjct:    3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADY--NDATAKAVASEINQAGG------RAMAVKVDVSDRDQVFAAVEQARKTLGG-FDVIVNNAGVA-PSTP-IESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV 254          
BLAST of CK935900 vs. ExPASy Swiss-Prot
Match: TRN2_HYONI (Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.148e-20
Identity = 75/255 (29.41%), Postives = 121/255 (47.45%), Query Frame = 2
Query:   74 IVTGSSRGIGREIAIHLAQLGAKLVINYTSNSAQADVVAAEINSSASPATYPPRAITVKA---DVSDPAQVKSLFDSAEQAFDSPVHVLVNSAGLLDPKYPTIANTSLDDFDRIFSVNARGAFLCCKEAANXXXXXXXXXXXXXSTSLVGALKPGYAAYTASKAAVETMAKILAKELKGTGITANCVAPGPIATEM----FFDGKSEEMVKKVIEECPHNRLGQSKDVAPVVGFLATDASEWVNGQVIRVNGGYV 817
            +VTG SRGIG  I   LA LGA  V   + N  + D    +  S         +   V+A   D+S  ++ +    +    F   +++LVN+AG++   Y    + +++D+  I S+N   A+     A               S+    +  P  A Y A+K A++ + + LA E     I  N V PG IAT M      D + +E + K+I+ C   R+G+ K++A VV FL   A+ +V GQ+I V+GG++
Sbjct:   13 LVTGGSRGIGYGIVEELANLGAS-VYTCSRNQKELDECLTQWRS---------KGFNVEASVCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGIVI--YKEAKDYTMEDYSHIMSINFEAAYHLSVLAHPFLKASERGNVVFISSISGASALPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSMVEMTIQDPEQKENLDKLIDRCALRRMGEPKELAAVVAFLCFPAASYVTGQIIYVDGGFM 255          
The following BLAST results are available for this feature:
BLAST of CK935900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
FABG_HAEIN1.488e-2128.923-oxoacyl-[acyl-carrier-protein] reductase OS=Haem... [more]
FABG_MYCS21.943e-2131.603-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
FABG_THEMA2.538e-2131.353-oxoacyl-[acyl-carrier-protein] reductase OS=Ther... [more]
FABG_MYCTU3.314e-2132.003-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
FABG_MYCBO3.314e-2132.003-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
Y325_THEMA5.653e-2129.69Uncharacterized oxidoreductase TM_0325 OS=Thermoto... [more]
Y4MP_RHISN1.259e-2033.33Uncharacterized short-chain type dehydrogenase/red... [more]
NODG_RHIS31.645e-2032.80Nodulation protein G OS=Rhizobium sp. (strain N33)... [more]
BUDC_KLEPN1.645e-2030.42Acetoin(diacetyl) reductase OS=Klebsiella pneumoni... [more]
TRN2_HYONI2.148e-2029.41Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 P... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004389_D03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IIIF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935900 ID=CK935900; Name=CK935900; organism=Citrus sinensis; type=EST; length=860bp
GGGGAACCCAATGGCCACCAGCACCAATACCCCATCGCTTTCACTCCCAC
TACCACTCAAAGATCGAGTTGTAATAGTGACCGGCTCATCTCGGGGAATC
GGCCGAGAAATCGCGATTCACCTTGCCCAACTCGGAGCCAAACTCGTCAT
CAACTACACCTCCAACTCGGCTCAAGCCGACGTCGTAGCCGCCGAGATTA
ACTCGTCGGCTTCCCCTGCCACATATCCGCCACGAGCCATTACTGTCAAA
GCCGACGTTTCGGATCCGGCCCAGGTCAAGTCTCTCTTTGACTCCGCTGA
GCAGGCTTTTGACTCGCCGGTTCATGTCCTGGTTAACTCCGCTGGGTTGC
TTGATCCGAAGTACCCCACTATTGCAAACACTTCCTTGGATGACTTTGAT
CGTATTTTCAGTGTCAATGCAAGGGGTGCATTCTTATGTTGCAAAGAGGC
AGCAAATAGGCTAGAACGCGGTGGCGGGGGTAGGATTATTCTGATATCAA
CATCACTGGTTGGCGCATTGAAGCCAGGGTATGCCGCGTACACAGCATCC
AAGGCAGCGGTGGAGACAATGGCGAAGATACTAGCAAAGGAGCTCAAGGG
AACCGGAATAACAGCAAATTGCGTAGCTCCAGGGCCGATTGCAACTGAGA
TGTTCTTTGATGGGAAGAGTGAGGAGATGGTGAAGAAGGTGATTGAAGAG
TGCCCGCATAATCGGCTTGGCCAGAGCAAGGATGTTGCTCCTGTTGTTGG
ATTCTTGGCCACTGATGCTAGTGAGTGGGTTAATGGGCAAGTAATTCGTG
TTAATGGTGGGTATGTCTAGGTTTTAGTAAGTATTCCTCATAGAATATTT
AAAGGAGTTG
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