CK936034

Overview
NameCK936034
Unique NameCK936034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL11_BOVIN (ADP-ribosylation factor-like protein 11 OS=Bos taurus GN=ARL11 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.142e-26
Identity = 52/129 (40.31%), Postives = 81/129 (62.79%), Query Frame = 2 
Query:  140 IPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 523
            +PT+GFNVE +E   ++S T+WDVGGQ ++R  W+ + +    L++V+DS D  R+ EA  EL  +L++  +    LLV ANK ++P A++  EI D+LGL     R W +++  A +G GL E L+ L
Sbjct:   41 LPTVGFNVEPLEEPGHVSLTLWDVGGQSQLRASWKDHLEGTDILVYVLDSTDEARLPEAVAELREVLDDPSVASVPLLVLANKQEVPQALSLPEIRDRLGLQGFLGRSWDLRACSALTGAGLPEALESL 169

HSP 2 Score: 34.6538 bits (78), Expect = 1.142e-26
Identity = 14/29 (48.28%), Postives = 24/29 (82.76%), Query Frame = 1 
Query:   46 KKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            + E +++M+GLD+ GKTT+LY+LK  ++V
Sbjct:   10 RAEAQVVMMGLDSAGKTTLLYRLKGYQLV 38
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL3_PONAB (ADP-ribosylation factor-like protein 3 OS=Pongo abelii GN=ARL3 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.942e-26
Identity = 54/134 (40.30%), Postives = 79/134 (58.96%), Query Frame = 2 
Query:  143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
            PT GFN+++V+ +     VWD+GGQ KIRP W++YF+N   L                 EL  +L E++L    +L+FANK DL  A  A+EI + L LH++R R W IQS  A +GEG+ +G++W+  N+  K
Sbjct:   47 PTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKNYFENTDIL-----------------ELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 163

HSP 2 Score: 30.4166 bits (67), Expect = 1.942e-26
Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 1 
Query:   49 KEMRILMVGLDAPGKTTILYKLKLGEI 129
            +E+RIL++GLD  GKTT+L +L   +I
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDI 42
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL11_HUMAN (ADP-ribosylation factor-like protein 11 OS=Homo sapiens GN=ARL11 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.737e-25
Identity = 48/129 (37.21%), Postives = 76/129 (58.91%), Query Frame = 2 
Query:  140 IPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 523
            +PT+GFNVE ++   ++S T+WDVGGQ  +R  W+ Y +    L++V+DS D  R+ E+  EL  +LN+  +     LV ANK + P+A+   +I ++L L   +   W ++   A +GEGL E L  L
Sbjct:   41 LPTVGFNVEPLKAPGHVSLTLWDVGGQAPLRASWKDYLEGTDILVYVLDSTDEARLPESAAELTEVLNDPNMAGVPFLVLANKQEAPDALPLLKIRNRLSLERFQDHCWELRGCSALTGEGLPEALQSL 169

HSP 2 Score: 37.3502 bits (85), Expect = 7.737e-25
Identity = 16/29 (55.17%), Postives = 24/29 (82.76%), Query Frame = 1 
Query:   46 KKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            K E +++M+GLD+ GKTT+LYKLK  ++V
Sbjct:   10 KAEAQVVMMGLDSAGKTTLLYKLKGHQLV 38
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: AR8BA_DANRE (ADP-ribosylation factor-like protein 8B-A OS=Danio rerio GN=arl8ba PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.223e-24
Identity = 43/128 (33.59%), Postives = 78/128 (60.94%), Query Frame = 2 
Query:  140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 523
            IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    ++++VD+ DR++V  +R+ELH +L++ +L+   +LV  NK DLPNA++  ++ +K+ L +++ R     S      + +   L WL
Sbjct:   50 IPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMVDAADREKVEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLAAIQDREICCYSISCKEKDNIDITLQWL 177

HSP 2 Score: 30.4166 bits (67), Expect = 2.223e-24
Identity = 14/33 (42.42%), Postives = 20/33 (60.61%), Query Frame = 1 
Query:   28 FSRLFAKKEMRILMVGLDAPGKTTILYKLKLGE 126
            F  LF K+EM + +VGL   GKTT +  +  G+
Sbjct:   12 FKSLFWKEEMELTLVGLQYSGKTTFVNVIASGQ 44
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL8B_RAT (ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus GN=Arl8b PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.766e-24
Identity = 41/128 (32.03%), Postives = 78/128 (60.94%), Query Frame = 2 
Query:  140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 523
            IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++++D+ DR+++  +R+ELH +L++ +L+   +LV  NK DLPNA++  ++ +K+ L +++ R     S      + +   L WL
Sbjct:   50 IPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177

HSP 2 Score: 30.0314 bits (66), Expect = 3.766e-24
Identity = 14/33 (42.42%), Postives = 20/33 (60.61%), Query Frame = 1 
Query:   28 FSRLFAKKEMRILMVGLDAPGKTTILYKLKLGE 126
            F  LF K+EM + +VGL   GKTT +  +  G+
Sbjct:   12 FRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQ 44
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL8B_MOUSE (ADP-ribosylation factor-like protein 8B OS=Mus musculus GN=Arl8b PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.766e-24
Identity = 41/128 (32.03%), Postives = 78/128 (60.94%), Query Frame = 2 
Query:  140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 523
            IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++++D+ DR+++  +R+ELH +L++ +L+   +LV  NK DLPNA++  ++ +K+ L +++ R     S      + +   L WL
Sbjct:   50 IPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177

HSP 2 Score: 30.0314 bits (66), Expect = 3.766e-24
Identity = 14/33 (42.42%), Postives = 20/33 (60.61%), Query Frame = 1 
Query:   28 FSRLFAKKEMRILMVGLDAPGKTTILYKLKLGE 126
            F  LF K+EM + +VGL   GKTT +  +  G+
Sbjct:   12 FRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQ 44
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL8B_HUMAN (ADP-ribosylation factor-like protein 8B OS=Homo sapiens GN=ARL8B PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.766e-24
Identity = 41/128 (32.03%), Postives = 78/128 (60.94%), Query Frame = 2 
Query:  140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 523
            IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++++D+ DR+++  +R+ELH +L++ +L+   +LV  NK DLPNA++  ++ +K+ L +++ R     S      + +   L WL
Sbjct:   50 IPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177

HSP 2 Score: 30.0314 bits (66), Expect = 3.766e-24
Identity = 14/33 (42.42%), Postives = 20/33 (60.61%), Query Frame = 1 
Query:   28 FSRLFAKKEMRILMVGLDAPGKTTILYKLKLGE 126
            F  LF K+EM + +VGL   GKTT +  +  G+
Sbjct:   12 FRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQ 44
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL11_RAT (ADP-ribosylation factor-like protein 11 OS=Rattus norvegicus GN=Arl11 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.775e-24
Identity = 46/124 (37.10%), Postives = 75/124 (60.48%), Query Frame = 2 
Query:  140 IPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYE 508
            +PT+GFNVE +E   ++S T+WD+GGQ ++R  W+ Y +    L++V+DS D  R+ EA  EL  +L +  +     LV ANK + P+A+   EI ++L L   +   W +++  A +G+GL E
Sbjct:   39 LPTVGFNVEPLEAPGHVSLTLWDIGGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELEEVLEDPNMAGVPFLVLANKQEAPDALPLLEIRNRLDLERFQDHCWELRACSALTGQGLQE 162

HSP 2 Score: 34.6538 bits (78), Expect = 3.775e-24
Identity = 15/25 (60.00%), Postives = 20/25 (80.00%), Query Frame = 1 
Query:   58 RILMVGLDAPGKTTILYKLKLGEIV 132
            +++M+GLD  GKTTILYKLK   +V
Sbjct:   12 QVVMLGLDCAGKTTILYKLKGNRLV 36
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL8B_MACFA (ADP-ribosylation factor-like protein 8B OS=Macaca fascicularis GN=ARL8B PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.901e-24
Identity = 41/128 (32.03%), Postives = 78/128 (60.94%), Query Frame = 2 
Query:  140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 523
            IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++++D+ DR+++  +R+ELH +L++ +L+   +LV  NK DLPNA++  ++ +K+ L +++ R     S      + +   L WL
Sbjct:   50 IPTVGFNMRKVTKGNVTIKIWDIGGQPRYRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177

HSP 2 Score: 30.0314 bits (66), Expect = 4.901e-24
Identity = 14/33 (42.42%), Postives = 20/33 (60.61%), Query Frame = 1 
Query:   28 FSRLFAKKEMRILMVGLDAPGKTTILYKLKLGE 126
            F  LF K+EM + +VGL   GKTT +  +  G+
Sbjct:   12 FRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQ 44
[Close]
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL8B_BOVIN (ADP-ribosylation factor-like protein 8B OS=Bos taurus GN=ARL8B PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.080e-23
Identity = 40/128 (31.25%), Postives = 78/128 (60.94%), Query Frame = 2 
Query:  140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 523
            IPT+GFN+  V   N++  +WD+GGQ + + +W  Y +    +++++D+ DR+++  +R+ELH +L++ +L+   +LV  NK DLPNA++  ++ +K+ L +++ R     S      + +   L WL
Sbjct:   50 IPTVGFNMRKVTKGNVTIKIWDIGGQPRFQSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177

HSP 2 Score: 30.0314 bits (66), Expect = 1.080e-23
Identity = 14/33 (42.42%), Postives = 20/33 (60.61%), Query Frame = 1 
Query:   28 FSRLFAKKEMRILMVGLDAPGKTTILYKLKLGE 126
            F  LF K+EM + +VGL   GKTT +  +  G+
Sbjct:   12 FRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQ 44
The following BLAST results are available for this feature:
BLAST of CK936034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
ARL11_BOVIN1.142e-2640.31ADP-ribosylation factor-like protein 11 OS=Bos tau... [more]
ARL3_PONAB1.942e-2640.30ADP-ribosylation factor-like protein 3 OS=Pongo ab... [more]
ARL11_HUMAN7.737e-2537.21ADP-ribosylation factor-like protein 11 OS=Homo sa... [more]
AR8BA_DANRE2.223e-2433.59ADP-ribosylation factor-like protein 8B-A OS=Danio... [more]
ARL8B_RAT3.766e-2432.03ADP-ribosylation factor-like protein 8B OS=Rattus ... [more]
ARL8B_MOUSE3.766e-2432.03ADP-ribosylation factor-like protein 8B OS=Mus mus... [more]
ARL8B_HUMAN3.766e-2432.03ADP-ribosylation factor-like protein 8B OS=Homo sa... [more]
ARL11_RAT3.775e-2437.10ADP-ribosylation factor-like protein 11 OS=Rattus ... [more]
ARL8B_MACFA4.901e-2432.03ADP-ribosylation factor-like protein 8B OS=Macaca ... [more]
ARL8B_BOVIN1.080e-2331.25ADP-ribosylation factor-like protein 8B OS=Bos tau... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004387_G04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IF_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936034 ID=CK936034; Name=CK936034; organism=Citrus sinensis; type=EST; length=672bp
AAAATGGGGCTGTCTTTCACCAAGCTTTTCAGCAGGCTTTTTGCTAAGAA
AGAGATGAGAATTCTCATGGTAGGTCTCGATGCACCTGGTAAGACTACTA
TCCTGTACAAGCTTAAGCTCGGAGAGATCGTCNNACACCATTCCTACCAT
TGGATTTAATGTAGAGACCGTTGAGTATAAGAACATCAGCTTTACTGTCT
GGGATGTTGGGGGTCAAGACAAGATCCGACCTTTGTGGAGACATTATTTC
CAAAACGCCCAAGGACTCATCTTTGTGGTTGACAGTAATGATCGCGACCG
TGTGGTAGAAGCTAGGGATGAGTTGCACAGAATGTTGAATGAGGATGAAT
TGAGAGATGCTGTGCTGCTTGTATTTGCTAACAAGCACGATCTTCCAAAT
GCAATGAATGCTGCTGAGATAACTGACAAGCTTGGCCTTCACTCTCTTCG
CCAGCGCCACTGGTATATCCAGAGCACATGTGCCACTTCTGGTGAAGGGC
TGTATGAGGGACTTGACTGGCTCTCAAACAACATTGCAAACAAGGCATAG
ACAACTAAATTTTGAGTTTTGGGTTGCCGCAACTGCTGAAATACAGAGTT
AACAACACATCTCAAGTGTTCTTGCTTTCCTTCCTGTAATAGCTTCGTTG
CCCGTTTTACTGTGTTTGTTGT
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