CK936034
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF4_XENLA (ADP-ribosylation factor 4 OS=Xenopus laevis GN=arf4 PE=2 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 3.465e-74 Identity = 106/135 (78.52%), Postives = 118/135 (87.41%), Query Frame = 2
Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
IPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQN QGLIFVVDSNDR+R+ EA +EL +ML EDELRDAVLLVFANK DLPNAM +E+TDKL L +LR R WY+Q+TCAT G GLYEGLDWLSN ++ +
Sbjct: 46 IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEAAEELQKMLQEDELRDAVLLVFANKQDLPNAMAISEMTDKLTLQTLRNRTWYVQATCATQGTGLYEGLDWLSNELSKR 180 HSP 2 Score: 72.7886 bits (177), Expect = 3.465e-74 Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 1
Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
MGL+ + LFSRLF KK+MRILMVGLDA GKTTILYKLKLGEIV
Sbjct: 1 MGLTISSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIV 43
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF5_RAT (ADP-ribosylation factor 5 OS=Rattus norvegicus GN=Arf5 PE=1 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 1.003e-73 Identity = 105/135 (77.78%), Postives = 118/135 (87.41%), Query Frame = 2
Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
IPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQN QGLIFVVDSNDR+RV E+ DEL +ML EDELRDAVLLVFANK D+PNAM +E+TDKLGL LR R WY+Q+TCAT G GLY+GLDWLS+ ++ +
Sbjct: 46 IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR 180 HSP 2 Score: 71.2478 bits (173), Expect = 1.003e-73 Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 1
Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
MGL+ + LFSR+F KK+MRILMVGLDA GKTTILYKLKLGEIV
Sbjct: 1 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIV 43
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF5_MOUSE (ADP-ribosylation factor 5 OS=Mus musculus GN=Arf5 PE=2 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 1.003e-73 Identity = 105/135 (77.78%), Postives = 118/135 (87.41%), Query Frame = 2
Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
IPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQN QGLIFVVDSNDR+RV E+ DEL +ML EDELRDAVLLVFANK D+PNAM +E+TDKLGL LR R WY+Q+TCAT G GLY+GLDWLS+ ++ +
Sbjct: 46 IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR 180 HSP 2 Score: 71.2478 bits (173), Expect = 1.003e-73 Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 1
Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
MGL+ + LFSR+F KK+MRILMVGLDA GKTTILYKLKLGEIV
Sbjct: 1 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIV 43
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF5_HUMAN (ADP-ribosylation factor 5 OS=Homo sapiens GN=ARF5 PE=1 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 1.003e-73 Identity = 105/135 (77.78%), Postives = 118/135 (87.41%), Query Frame = 2
Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
IPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQN QGLIFVVDSNDR+RV E+ DEL +ML EDELRDAVLLVFANK D+PNAM +E+TDKLGL LR R WY+Q+TCAT G GLY+GLDWLS+ ++ +
Sbjct: 46 IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR 180 HSP 2 Score: 71.2478 bits (173), Expect = 1.003e-73 Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 1
Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
MGL+ + LFSR+F KK+MRILMVGLDA GKTTILYKLKLGEIV
Sbjct: 1 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIV 43
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF2_YEAST (ADP-ribosylation factor 2 OS=Saccharomyces cerevisiae GN=ARF2 PE=1 SV=3) HSP 1 Score: 229.565 bits (584), Expect = 2.901e-73 Identity = 105/136 (77.21%), Postives = 124/136 (91.18%), Query Frame = 2
Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 547
IPTIGFNVETV+YKNISFTVWDVGGQD+IR LWRHY++N +G+IFV+DSNDR R+ EAR+ + RMLNEDELR+AV LVFANK DLP AM+AAEIT+KLGLHS+R R W+IQSTCATSGEGLYEGL+WLSNN+ N++
Sbjct: 46 IPTIGFNVETVQYKNISFTVWDVGGQDRIRSLWRHYYRNTEGVIFVIDSNDRSRIGEAREVMQRMLNEDELRNAVWLVFANKQDLPEAMSAAEITEKLGLHSIRNRPWFIQSTCATSGEGLYEGLEWLSNNLKNQS 181 HSP 2 Score: 67.3958 bits (163), Expect = 2.901e-73 Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 1
Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
MGL +KLFS LF KEMRILMVGLD GKTT+LYKLKLGE++
Sbjct: 1 MGLYASKLFSNLFGNKEMRILMVGLDGAGKTTVLYKLKLGEVI 43
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF4_PONAB (ADP-ribosylation factor 4 OS=Pongo abelii GN=ARF4 PE=2 SV=3) HSP 1 Score: 224.172 bits (570), Expect = 2.901e-73 Identity = 104/135 (77.04%), Postives = 117/135 (86.67%), Query Frame = 2
Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
IPTIGFNVETVEYKNI FTVWDVGGQD+IRPLW+HYFQN QGLIFVVDSNDR+R+ E DEL +ML DELRDAVLL+FANK DLPNAM +E+TDKLGL SLR R WY+Q+TCAT G GLYEGLDWLSN ++ +
Sbjct: 46 IPTIGFNVETVEYKNICFTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSKR 180 HSP 2 Score: 72.7886 bits (177), Expect = 2.901e-73 Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 1
Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
MGL+ + LFSRLF KK+MRILMVGLDA GKTTILYKLKLGEIV
Sbjct: 1 MGLTISSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIV 43
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF4_HUMAN (ADP-ribosylation factor 4 OS=Homo sapiens GN=ARF4 PE=1 SV=3) HSP 1 Score: 224.172 bits (570), Expect = 2.901e-73 Identity = 104/135 (77.04%), Postives = 117/135 (86.67%), Query Frame = 2
Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
IPTIGFNVETVEYKNI FTVWDVGGQD+IRPLW+HYFQN QGLIFVVDSNDR+R+ E DEL +ML DELRDAVLL+FANK DLPNAM +E+TDKLGL SLR R WY+Q+TCAT G GLYEGLDWLSN ++ +
Sbjct: 46 IPTIGFNVETVEYKNICFTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSKR 180 HSP 2 Score: 72.7886 bits (177), Expect = 2.901e-73 Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 1
Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
MGL+ + LFSRLF KK+MRILMVGLDA GKTTILYKLKLGEIV
Sbjct: 1 MGLTISSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIV 43
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF5_CHICK (ADP-ribosylation factor 5 OS=Gallus gallus GN=ARF5 PE=2 SV=2) HSP 1 Score: 226.098 bits (575), Expect = 3.783e-73 Identity = 104/135 (77.04%), Postives = 119/135 (88.15%), Query Frame = 2
Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
IPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQN QGLIFVVDSNDR+RV E+ +EL +ML EDELRDAVLLVFANK D+PNAM +E+TDKLGL +LR R WY+Q+TCAT G GLY+GLDWLS+ ++ +
Sbjct: 46 IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESAEELQKMLQEDELRDAVLLVFANKQDMPNAMVVSELTDKLGLQALRSRTWYVQATCATQGTGLYDGLDWLSHELSKR 180 HSP 2 Score: 70.4774 bits (171), Expect = 3.783e-73 Identity = 34/43 (79.07%), Postives = 39/43 (90.70%), Query Frame = 1
Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
MGL+ + +FSR+F KK+MRILMVGLDA GKTTILYKLKLGEIV
Sbjct: 1 MGLTVSAIFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIV 43
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF4_RAT (ADP-ribosylation factor 4 OS=Rattus norvegicus GN=Arf4 PE=2 SV=2) HSP 1 Score: 221.861 bits (564), Expect = 1.427e-72 Identity = 104/135 (77.04%), Postives = 116/135 (85.93%), Query Frame = 2
Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
IPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQN QGLIFVVDSNDR+R+ E L +ML EDEL+DAVLL+FANK DLPNAM +E+TDKLGL SLR R WY+Q+TCAT G GLYEGLDWLSN ++ +
Sbjct: 46 IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSKR 180 HSP 2 Score: 72.7886 bits (177), Expect = 1.427e-72 Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 1
Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
MGL+ + LFSRLF KK+MRILMVGLDA GKTTILYKLKLGEIV
Sbjct: 1 MGLTISSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIV 43
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF4_MOUSE (ADP-ribosylation factor 4 OS=Mus musculus GN=Arf4 PE=2 SV=2) HSP 1 Score: 221.861 bits (564), Expect = 1.427e-72 Identity = 104/135 (77.04%), Postives = 116/135 (85.93%), Query Frame = 2
Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
IPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQN QGLIFVVDSNDR+R+ E L +ML EDEL+DAVLL+FANK DLPNAM +E+TDKLGL SLR R WY+Q+TCAT G GLYEGLDWLSN ++ +
Sbjct: 46 IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSKR 180 HSP 2 Score: 72.7886 bits (177), Expect = 1.427e-72 Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 1
Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
MGL+ + LFSRLF KK+MRILMVGLDA GKTTILYKLKLGEIV
Sbjct: 1 MGLTISSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIV 43 The following BLAST results are available for this feature:
BLAST of CK936034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936034 ID=CK936034; Name=CK936034; organism=Citrus sinensis; type=EST; length=672bpback to top |