CK936034
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF1_PLAFA (ADP-ribosylation factor 1 OS=Plasmodium falciparum GN=ARF1 PE=2 SV=3) HSP 1 Score: 225.713 bits (574), Expect = 4.130e-72 Identity = 99/134 (73.88%), Postives = 124/134 (92.54%), Query Frame = 2 Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAN 541 IPTIGFNVETVE++NISFTVWDVGGQDKIRPLWRHY+ N GLIFVVDSNDR+R+ +AR+ELHRM+NE+EL+DA++LVFANK DLPNAM+AAE+T+KL L+++R+R+W+IQSTCAT G+GLYEG DWL+ ++ N Sbjct: 46 IPTIGFNVETVEFRNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDLPNAMSAAEVTEKLHLNTIRERNWFIQSTCATRGDGLYEGFDWLTTHLNN 179 HSP 2 Score: 67.3958 bits (163), Expect = 4.130e-72 Identity = 32/43 (74.42%), Postives = 39/43 (90.70%), Query Frame = 1 Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132 MGL ++LF+RLF KK++RILMVGLDA GKTTILYK+KLGE+V Sbjct: 1 MGLYVSRLFNRLFQKKDVRILMVGLDAAGKTTILYKVKLGEVV 43
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF1_YEAST (ADP-ribosylation factor 1 OS=Saccharomyces cerevisiae GN=ARF1 PE=1 SV=3) HSP 1 Score: 224.557 bits (571), Expect = 9.161e-72 Identity = 103/134 (76.87%), Postives = 121/134 (90.30%), Query Frame = 2 Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAN 541 IPTIGFNVETV+YKNISFTVWDVGGQD+IR LWRHY++N +G+IFVVDSNDR R+ EAR+ + RMLNEDELR+A LVFANK DLP AM+AAEIT+KLGLHS+R R W+IQ+TCATSGEGLYEGL+WLSN++ N Sbjct: 46 IPTIGFNVETVQYKNISFTVWDVGGQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQDLPEAMSAAEITEKLGLHSIRNRPWFIQATCATSGEGLYEGLEWLSNSLKN 179 HSP 2 Score: 67.3958 bits (163), Expect = 9.161e-72 Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 1 Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132 MGL +KLFS LF KEMRILMVGLD GKTT+LYKLKLGE++ Sbjct: 1 MGLFASKLFSNLFGNKEMRILMVGLDGAGKTTVLYKLKLGEVI 43
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF1_PLAFO (ADP-ribosylation factor 1 OS=Plasmodium falciparum (isolate NF54) GN=ARF1 PE=2 SV=2) HSP 1 Score: 223.016 bits (567), Expect = 2.650e-71 Identity = 98/134 (73.13%), Postives = 123/134 (91.79%), Query Frame = 2 Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAN 541 IPTIGFNVETVE++NISFTVWDVGGQDKIRPLWRHY+ N GLIFVVDSNDR+R+ +AR+ LHRM+NE+EL+DA++LVFANK DLPNAM+AAE+T+KL L+++R+R+W+IQSTCAT G+GLYEG DWL+ ++ N Sbjct: 46 IPTIGFNVETVEFRNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREGLHRMINEEELKDAIILVFANKQDLPNAMSAAEVTEKLHLNTIRERNWFIQSTCATRGDGLYEGFDWLTTHLNN 179 HSP 2 Score: 67.3958 bits (163), Expect = 2.650e-71 Identity = 32/43 (74.42%), Postives = 39/43 (90.70%), Query Frame = 1 Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132 MGL ++LF+RLF KK++RILMVGLDA GKTTILYK+KLGE+V Sbjct: 1 MGLYVSRLFNRLFQKKDVRILMVGLDAAGKTTILYKVKLGEVV 43
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF_GIALA (ADP-ribosylation factor OS=Giardia lamblia PE=3 SV=3) HSP 1 Score: 201.83 bits (512), Expect = 2.859e-64 Identity = 92/137 (67.15%), Postives = 114/137 (83.21%), Query Frame = 2 Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRD--RVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544 +PTIGFNVETVEYKNI+FTVWDVGGQD IRPLWRHY+QN LI+V+DS D + R+ +A++ELH +L EDELRDA LLVFANK DLP AM+ ++T++LGL L++R WYIQ TCA SG+GLY+GLDWLS+ I +K Sbjct: 46 VPTIGFNVETVEYKNINFTVWDVGGQDSIRPLWRHYYQNTDALIYVIDSADLEPKRIEDAKNELHTLLGEDELRDAALLVFANKQDLPKAMSTTDLTERLGLQELKKRDWYIQPTCARSGDGLYQGLDWLSDYIFDK 182 HSP 2 Score: 65.0846 bits (157), Expect = 2.859e-64 Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 1 Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132 MG +K+F +LF+KKE+RILMVGLDA GKTTILYKL LGE+V Sbjct: 1 MGQGASKIFGKLFSKKEVRILMVGLDAAGKTTILYKLMLGEVV 43
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF6_RAT (ADP-ribosylation factor 6 OS=Rattus norvegicus GN=Arf6 PE=1 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 1.176e-62 Identity = 90/131 (68.70%), Postives = 110/131 (83.97%), Query Frame = 2 Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN 532 IPT+GFNVETV YKN+ F VWDVGGQDKIRPLWRHY+ QGLIFVVD DRDR+ EAR ELHR++N+ E+RDA++L+FANK DLP+AM EI +KLGL +R R+WY+Q +CATSG+GLYEGL WL++N Sbjct: 42 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSN 172 HSP 2 Score: 57.3806 bits (137), Expect = 1.176e-62 Identity = 27/37 (72.97%), Postives = 32/37 (86.49%), Query Frame = 1 Query: 22 KLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132 K+ S++F KEMRILM+GLDA GKTTILYKLKLG+ V Sbjct: 3 KVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSV 39
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF6_PIG (ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.176e-62 Identity = 90/131 (68.70%), Postives = 110/131 (83.97%), Query Frame = 2 Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN 532 IPT+GFNVETV YKN+ F VWDVGGQDKIRPLWRHY+ QGLIFVVD DRDR+ EAR ELHR++N+ E+RDA++L+FANK DLP+AM EI +KLGL +R R+WY+Q +CATSG+GLYEGL WL++N Sbjct: 42 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSN 172 HSP 2 Score: 57.3806 bits (137), Expect = 1.176e-62 Identity = 27/37 (72.97%), Postives = 32/37 (86.49%), Query Frame = 1 Query: 22 KLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132 K+ S++F KEMRILM+GLDA GKTTILYKLKLG+ V Sbjct: 3 KVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSV 39
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF6_MOUSE (ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 PE=1 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 1.176e-62 Identity = 90/131 (68.70%), Postives = 110/131 (83.97%), Query Frame = 2 Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN 532 IPT+GFNVETV YKN+ F VWDVGGQDKIRPLWRHY+ QGLIFVVD DRDR+ EAR ELHR++N+ E+RDA++L+FANK DLP+AM EI +KLGL +R R+WY+Q +CATSG+GLYEGL WL++N Sbjct: 42 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSN 172 HSP 2 Score: 57.3806 bits (137), Expect = 1.176e-62 Identity = 27/37 (72.97%), Postives = 32/37 (86.49%), Query Frame = 1 Query: 22 KLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132 K+ S++F KEMRILM+GLDA GKTTILYKLKLG+ V Sbjct: 3 KVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSV 39
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF6_HUMAN (ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 PE=1 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 1.176e-62 Identity = 90/131 (68.70%), Postives = 110/131 (83.97%), Query Frame = 2 Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN 532 IPT+GFNVETV YKN+ F VWDVGGQDKIRPLWRHY+ QGLIFVVD DRDR+ EAR ELHR++N+ E+RDA++L+FANK DLP+AM EI +KLGL +R R+WY+Q +CATSG+GLYEGL WL++N Sbjct: 42 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSN 172 HSP 2 Score: 57.3806 bits (137), Expect = 1.176e-62 Identity = 27/37 (72.97%), Postives = 32/37 (86.49%), Query Frame = 1 Query: 22 KLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132 K+ S++F KEMRILM+GLDA GKTTILYKLKLG+ V Sbjct: 3 KVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSV 39
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF6_XENLA (ADP-ribosylation factor 6 OS=Xenopus laevis GN=arf6 PE=2 SV=2) HSP 1 Score: 202.216 bits (513), Expect = 2.000e-62 Identity = 89/131 (67.94%), Postives = 109/131 (83.21%), Query Frame = 2 Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN 532 IPT+GFNVETV YKN+ F VWDVGGQDKIRPLWRHY+ QGLIFVVD DRDR+ EAR ELHR++N+ E+RDA++L+FANK DLP+AM EI +KLGL +R R+WY+Q +CA SG+GLYEGL WL++N Sbjct: 42 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCPDRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCAASGDGLYEGLTWLTSN 172 HSP 2 Score: 58.5362 bits (140), Expect = 2.000e-62 Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 1 Query: 22 KLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132 K+FS++F KEMRILM GLDA GKTTILYKLKLG+ V Sbjct: 3 KMFSKIFGNKEMRILMRGLDAAGKTTILYKLKLGQSV 39
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF6_CHICK (ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6 PE=2 SV=3) HSP 1 Score: 202.986 bits (515), Expect = 2.608e-62 Identity = 89/131 (67.94%), Postives = 110/131 (83.97%), Query Frame = 2 Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNN 532 IPT+GFNVETV YKN+ F VWDVGGQDKIRPLWRHY+ QGLIFVVD DRDR+ EAR ELHR++N+ E+RDA++L+FANK DLP+AM EI +KLGL +R R+WY+Q +CAT+G+GLYEGL WL++N Sbjct: 42 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATTGDGLYEGLTWLTSN 172 HSP 2 Score: 57.3806 bits (137), Expect = 2.608e-62 Identity = 27/37 (72.97%), Postives = 32/37 (86.49%), Query Frame = 1 Query: 22 KLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132 K+ S++F KEMRILM+GLDA GKTTILYKLKLG+ V Sbjct: 3 KVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSV 39 The following BLAST results are available for this feature:
BLAST of CK936034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936034 ID=CK936034; Name=CK936034; organism=Citrus sinensis; type=EST; length=672bpback to top |